RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 PIGQQ9BRB3 760 aa16.92■□□□□ 0.3
UBE3D-207ENST00000509102 BHLHE41Q9C0J9 482 aaPredicted RBP16.92■□□□□ 0.3
UBE3D-207ENST00000509102 MED11Q9P086 117 aa16.92■□□□□ 0.3
UBE3D-207ENST00000509102 INTS1Q8N201 2190 aaKnown RBP16.91■□□□□ 0.3
UBE3D-207ENST00000509102 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.91■□□□□ 0.3
UBE3D-207ENST00000509102 ITM2AO43736 263 aa16.91■□□□□ 0.3
UBE3D-207ENST00000509102 ANGPTL1O95841 491 aa16.91■□□□□ 0.3
UBE3D-207ENST00000509102 DHRS4L1P0CG22 281 aa16.91■□□□□ 0.3
UBE3D-207ENST00000509102 POU3F2P20265 443 aaPredicted RBP16.91■□□□□ 0.3
UBE3D-207ENST00000509102 ATP6V1C1P21283 382 aa16.91■□□□□ 0.3
UBE3D-207ENST00000509102 CCT3P49368 545 aaKnown RBP16.91■□□□□ 0.3
UBE3D-207ENST00000509102 WNT3P56703 355 aa16.91■□□□□ 0.3
UBE3D-207ENST00000509102 EEF1A1P68104 462 aaKnown RBP16.91■□□□□ 0.3
UBE3D-207ENST00000509102 POU6F2P78424 691 aaPredicted RBP16.91■□□□□ 0.3
UBE3D-207ENST00000509102 TP53BP2Q13625 1128 aa16.91■□□□□ 0.3
UBE3D-207ENST00000509102 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.91■□□□□ 0.3
UBE3D-207ENST00000509102 GRAMD1BQ3KR37 738 aa16.91■□□□□ 0.3
UBE3D-207ENST00000509102 EEF1A1P5Q5VTE0 462 aa16.91■□□□□ 0.3
UBE3D-207ENST00000509102 ARSKQ6UWY0 536 aa16.91■□□□□ 0.3
UBE3D-207ENST00000509102 GRAMD2AQ8IUY3 354 aa16.91■□□□□ 0.3
UBE3D-207ENST00000509102 SLC16A11Q8NCK7 471 aa16.91■□□□□ 0.3
UBE3D-207ENST00000509102 NAXEQ8NCW5 288 aa16.91■□□□□ 0.3
UBE3D-207ENST00000509102 WNT2BQ93097 391 aa16.91■□□□□ 0.3
UBE3D-207ENST00000509102 COQ8BQ96D53 544 aa16.91■□□□□ 0.3
UBE3D-207ENST00000509102 GIMAP5Q96F15 307 aa16.91■□□□□ 0.3
UBE3D-207ENST00000509102 MS4A3Q96HJ5 214 aa16.91■□□□□ 0.3
UBE3D-207ENST00000509102 PPP1R36Q96LQ0 422 aa16.91■□□□□ 0.3
UBE3D-207ENST00000509102 STACQ99469 402 aa16.91■□□□□ 0.3
UBE3D-207ENST00000509102 DUSP26Q9BV47 211 aa16.91■□□□□ 0.3
UBE3D-207ENST00000509102 DUSP22Q9NRW4 184 aa16.91■□□□□ 0.3
UBE3D-207ENST00000509102 ASIC5Q9NY37 505 aa16.91■□□□□ 0.3
UBE3D-207ENST00000509102 FLRT3Q9NZU0 649 aa16.91■□□□□ 0.3
UBE3D-207ENST00000509102 HCFC1P51610 2035 aa16.91■□□□□ 0.3
UBE3D-207ENST00000509102 DCHS2Q6V1P9 2916 aa16.9■□□□□ 0.3
UBE3D-207ENST00000509102 CLCA1A8K7I4 914 aa16.9■□□□□ 0.3
UBE3D-207ENST00000509102 SCDO00767 359 aa16.9■□□□□ 0.3
UBE3D-207ENST00000509102 NDUFB5O43674 189 aa16.9■□□□□ 0.3
UBE3D-207ENST00000509102 ZIC3O60481 467 aa16.9■□□□□ 0.3
UBE3D-207ENST00000509102 KCNK2O95069 426 aa16.9■□□□□ 0.3
UBE3D-207ENST00000509102 IL18BPO95998 194 aa16.9■□□□□ 0.3
UBE3D-207ENST00000509102 HMGN2P05204 90 aaKnown RBP16.9■□□□□ 0.3
UBE3D-207ENST00000509102 NGFRP08138 427 aa16.9■□□□□ 0.3
UBE3D-207ENST00000509102 TMIGD3P0DMS9 266 aaPredicted RBP16.9■□□□□ 0.3
UBE3D-207ENST00000509102 ACP2P11117 423 aa16.9■□□□□ 0.3
UBE3D-207ENST00000509102 G6PDP11413 515 aa16.9■□□□□ 0.3
UBE3D-207ENST00000509102 ZNF708P17019 499 aa16.9■□□□□ 0.3
UBE3D-207ENST00000509102 BGNP21810 368 aa16.9■□□□□ 0.3
UBE3D-207ENST00000509102 MAP3K8P41279 467 aa16.9■□□□□ 0.3
UBE3D-207ENST00000509102 STARP49675 285 aa16.9■□□□□ 0.3
UBE3D-207ENST00000509102 LHX2P50458 406 aa16.9■□□□□ 0.3
UBE3D-207ENST00000509102 ZNF136P52737 540 aa16.9■□□□□ 0.3
UBE3D-207ENST00000509102 DIO3P55073 304 aa16.9■□□□□ 0.3
UBE3D-207ENST00000509102 LASP1Q14847 261 aaKnown RBP16.9■□□□□ 0.3
UBE3D-207ENST00000509102 DUSP5Q16690 384 aa16.9■□□□□ 0.3
UBE3D-207ENST00000509102 PGS1Q32NB8 556 aa16.9■□□□□ 0.3
UBE3D-207ENST00000509102 GLYR1Q49A26 553 aaPredicted RBP16.9■□□□□ 0.3
UBE3D-207ENST00000509102 TNFAIP8L3Q5GJ75 292 aa16.9■□□□□ 0.3
UBE3D-207ENST00000509102 FIGNL1Q6PIW4 674 aa16.9■□□□□ 0.3
UBE3D-207ENST00000509102 P4HA3Q7Z4N8 544 aa16.9■□□□□ 0.3
UBE3D-207ENST00000509102 MISPQ8IVT2 679 aa16.9■□□□□ 0.3
UBE3D-207ENST00000509102 KRTCAP2Q8N6L1 136 aa16.9■□□□□ 0.3
UBE3D-207ENST00000509102 ANKRD42Q8N9B4 389 aa16.9■□□□□ 0.3
UBE3D-207ENST00000509102 SFXN5Q8TD22 340 aa16.9■□□□□ 0.3
UBE3D-207ENST00000509102 ADAMTS15Q8TE58 950 aa16.9■□□□□ 0.3
UBE3D-207ENST00000509102 RNASE6Q93091 150 aaKnown RBP16.9■□□□□ 0.3
UBE3D-207ENST00000509102 C1GALT1C1Q96EU7 318 aa16.9■□□□□ 0.3
UBE3D-207ENST00000509102 YIPF4Q9BSR8 244 aa16.9■□□□□ 0.3
UBE3D-207ENST00000509102 BTBD2Q9BX70 525 aa16.9■□□□□ 0.3
UBE3D-207ENST00000509102 ACTRT3Q9BYD9 372 aa16.9■□□□□ 0.3
UBE3D-207ENST00000509102 UBQLN4Q9NRR5 601 aa16.9■□□□□ 0.3
UBE3D-207ENST00000509102 GIN1Q9NXP7 522 aa16.9■□□□□ 0.3
UBE3D-207ENST00000509102 PCDHGB4Q9UN71 923 aa16.9■□□□□ 0.3
UBE3D-207ENST00000509102 EEF1E1-BLOC1S5C9J1V9 151 aa16.89■□□□□ 0.29
UBE3D-207ENST00000509102 ALG1L2C9J202 215 aa16.89■□□□□ 0.29
UBE3D-207ENST00000509102 SYT5O00445 386 aa16.89■□□□□ 0.29
UBE3D-207ENST00000509102 EEF1E1O43324 174 aaKnown RBP16.89■□□□□ 0.29
UBE3D-207ENST00000509102 C6orf47O95873 294 aa16.89■□□□□ 0.29
UBE3D-207ENST00000509102 IGKV1D-16P01601 117 aa16.89■□□□□ 0.29
UBE3D-207ENST00000509102 TBXA2RP21731 343 aa16.89■□□□□ 0.29
UBE3D-207ENST00000509102 SOAT1P35610 550 aa16.89■□□□□ 0.29
UBE3D-207ENST00000509102 KIR2DL3P43628 341 aa16.89■□□□□ 0.29
UBE3D-207ENST00000509102 CLDN8P56748 225 aa16.89■□□□□ 0.29
UBE3D-207ENST00000509102 C21orf58P58505 322 aa16.89■□□□□ 0.29
UBE3D-207ENST00000509102 CDC73Q6P1J9 531 aa16.89■□□□□ 0.29
UBE3D-207ENST00000509102 GALNT10Q86SR1 603 aa16.89■□□□□ 0.29
UBE3D-207ENST00000509102 TMEM200AQ86VY9 491 aa16.89■□□□□ 0.29
UBE3D-207ENST00000509102 KIF18BQ86Y91 864 aa16.89■□□□□ 0.29
UBE3D-207ENST00000509102 UBQLNLQ8IYU4 475 aa16.89■□□□□ 0.29
UBE3D-207ENST00000509102 LRRC34Q8IZ02 419 aa16.89■□□□□ 0.29
UBE3D-207ENST00000509102 ZNF527Q8NB42 609 aa16.89■□□□□ 0.29
UBE3D-207ENST00000509102 RELL2Q8NC24 303 aaPredicted RBP16.89■□□□□ 0.29
UBE3D-207ENST00000509102 VPS37AQ8NEZ2 397 aa16.89■□□□□ 0.29
UBE3D-207ENST00000509102 PSMA8Q8TAA3 256 aa16.89■□□□□ 0.29
UBE3D-207ENST00000509102 C16orf58Q96GQ5 468 aa16.89■□□□□ 0.29
UBE3D-207ENST00000509102 UCN2Q96RP3 112 aa16.89■□□□□ 0.29
UBE3D-207ENST00000509102 SFXN3Q9BWM7 321 aa16.89■□□□□ 0.29
UBE3D-207ENST00000509102 DPY30Q9C005 99 aa16.89■□□□□ 0.29
UBE3D-207ENST00000509102 PIGUQ9H490 435 aa16.89■□□□□ 0.29
UBE3D-207ENST00000509102 AKTIPQ9H8T0 292 aa16.89■□□□□ 0.29
UBE3D-207ENST00000509102 SIRT3Q9NTG7 399 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms