RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 FAM120BQ96EK7 910 aaKnown RBP13.41□□□□□ -0.26
UBE2D3-228ENST00000508974 DTNBP1Q96EV8 351 aa13.41□□□□□ -0.26
UBE2D3-228ENST00000508974 SH3GL2Q99962 352 aa13.41□□□□□ -0.26
UBE2D3-228ENST00000508974 PAIP2Q9BPZ3 127 aaKnown RBP13.41□□□□□ -0.26
UBE2D3-228ENST00000508974 G6PC3Q9BUM1 346 aa13.41□□□□□ -0.26
UBE2D3-228ENST00000508974 CALHM2Q9HA72 323 aa13.41□□□□□ -0.26
UBE2D3-228ENST00000508974 SDHAF3Q9NRP4 125 aa13.41□□□□□ -0.26
UBE2D3-228ENST00000508974 SIRT3Q9NTG7 399 aaPredicted RBP13.41□□□□□ -0.26
UBE2D3-228ENST00000508974 ACSS1Q9NUB1 689 aaPredicted RBP13.41□□□□□ -0.26
UBE2D3-228ENST00000508974 FBXO34Q9NWN3 711 aa13.41□□□□□ -0.26
UBE2D3-228ENST00000508974 KCNN3Q9UGI6 736 aa13.41□□□□□ -0.26
UBE2D3-228ENST00000508974 ATP6V1HQ9UI12 483 aa13.41□□□□□ -0.26
UBE2D3-228ENST00000508974 H0YC42 278 aa13.4□□□□□ -0.26
UBE2D3-228ENST00000508974 H3BML4 177 aa13.4□□□□□ -0.26
UBE2D3-228ENST00000508974 NKX2-2O95096 273 aa13.4□□□□□ -0.26
UBE2D3-228ENST00000508974 C6orf47O95873 294 aa13.4□□□□□ -0.26
UBE2D3-228ENST00000508974 SERPINE1P05121 402 aa13.4□□□□□ -0.26
UBE2D3-228ENST00000508974 IFI6P09912 130 aa13.4□□□□□ -0.26
UBE2D3-228ENST00000508974 ALOX5P09917 674 aa13.4□□□□□ -0.26
UBE2D3-228ENST00000508974 ZNF708P17019 499 aa13.4□□□□□ -0.26
UBE2D3-228ENST00000508974 POU3F2P20265 443 aaPredicted RBP13.4□□□□□ -0.26
UBE2D3-228ENST00000508974 BGNP21810 368 aa13.4□□□□□ -0.26
UBE2D3-228ENST00000508974 CTSSP25774 331 aa13.4□□□□□ -0.26
UBE2D3-228ENST00000508974 KIR2DL3P43628 341 aa13.4□□□□□ -0.26
UBE2D3-228ENST00000508974 TPD52P55327 224 aaPredicted RBP13.4□□□□□ -0.26
UBE2D3-228ENST00000508974 B3GALT5-AS1P59052 145 aa13.4□□□□□ -0.26
UBE2D3-228ENST00000508974 PRR5P85299 388 aa13.4□□□□□ -0.26
UBE2D3-228ENST00000508974 TP53BP2Q13625 1128 aa13.4□□□□□ -0.26
UBE2D3-228ENST00000508974 LASP1Q14847 261 aaKnown RBP13.4□□□□□ -0.26
UBE2D3-228ENST00000508974 SPDYE7PQ495Y7 208 aa13.4□□□□□ -0.26
UBE2D3-228ENST00000508974 CPTPQ5TA50 214 aa13.4□□□□□ -0.26
UBE2D3-228ENST00000508974 GRAMD2AQ8IUY3 354 aa13.4□□□□□ -0.26
UBE2D3-228ENST00000508974 COX18Q8N8Q8 333 aa13.4□□□□□ -0.26
UBE2D3-228ENST00000508974 OR5AK3PQ8NH89 298 aa13.4□□□□□ -0.26
UBE2D3-228ENST00000508974 NRGNQ92686 78 aa13.4□□□□□ -0.26
UBE2D3-228ENST00000508974 CDS1Q92903 461 aa13.4□□□□□ -0.26
UBE2D3-228ENST00000508974 C20orf27Q9GZN8 174 aa13.4□□□□□ -0.26
UBE2D3-228ENST00000508974 PTGES2Q9H7Z7 377 aa13.4□□□□□ -0.26
UBE2D3-228ENST00000508974 ZNF629Q9UEG4 869 aaPredicted RBP13.4□□□□□ -0.26
UBE2D3-228ENST00000508974 RAB21Q9UL25 225 aa13.4□□□□□ -0.26
UBE2D3-228ENST00000508974 VDAC3Q9Y277 283 aa13.4□□□□□ -0.26
UBE2D3-228ENST00000508974 NUP214P35658 2090 aaPredicted RBP13.4□□□□□ -0.27
UBE2D3-228ENST00000508974 CFLARO15519 480 aa13.39□□□□□ -0.27
UBE2D3-228ENST00000508974 KCNK2O95069 426 aa13.39□□□□□ -0.27
UBE2D3-228ENST00000508974 OXSR1O95747 527 aaPredicted RBP13.39□□□□□ -0.27
UBE2D3-228ENST00000508974 HMGN2P05204 90 aaKnown RBP13.39□□□□□ -0.27
UBE2D3-228ENST00000508974 G6PDP11413 515 aa13.39□□□□□ -0.27
UBE2D3-228ENST00000508974 DDX5P17844 614 aaKnown RBP13.39□□□□□ -0.27
UBE2D3-228ENST00000508974 CHMP24386 653 aa13.39□□□□□ -0.27
UBE2D3-228ENST00000508974 SOAT1P35610 550 aa13.39□□□□□ -0.27
UBE2D3-228ENST00000508974 RPL3P39023 403 aaKnown RBP13.39□□□□□ -0.27
UBE2D3-228ENST00000508974 MAP3K8P41279 467 aa13.39□□□□□ -0.27
UBE2D3-228ENST00000508974 ABCE1P61221 599 aaKnown RBP13.39□□□□□ -0.27
UBE2D3-228ENST00000508974 MPP2Q14168 576 aa13.39□□□□□ -0.27
UBE2D3-228ENST00000508974 PGS1Q32NB8 556 aa13.39□□□□□ -0.27
UBE2D3-228ENST00000508974 P4HA3Q7Z4N8 544 aa13.39□□□□□ -0.27
UBE2D3-228ENST00000508974 LUZP2Q86TE4 346 aa13.39□□□□□ -0.27
UBE2D3-228ENST00000508974 HOMEZQ8IX15 550 aa13.39□□□□□ -0.27
UBE2D3-228ENST00000508974 ANKRD42Q8N9B4 389 aa13.39□□□□□ -0.27
UBE2D3-228ENST00000508974 OR4C3Q8NH37 302 aa13.39□□□□□ -0.27
UBE2D3-228ENST00000508974 RNASE6Q93091 150 aaKnown RBP13.39□□□□□ -0.27
UBE2D3-228ENST00000508974 C1GALT1C1Q96EU7 318 aa13.39□□□□□ -0.27
UBE2D3-228ENST00000508974 LRRC46Q96FV0 321 aa13.39□□□□□ -0.27
UBE2D3-228ENST00000508974 SH3YL1Q96HL8 342 aaPredicted RBP13.39□□□□□ -0.27
UBE2D3-228ENST00000508974 TM9SF2Q99805 663 aa13.39□□□□□ -0.27
UBE2D3-228ENST00000508974 CXorf36Q9H7Y0 433 aa13.39□□□□□ -0.27
UBE2D3-228ENST00000508974 ATAD3AQ9NVI7 634 aa13.39□□□□□ -0.27
UBE2D3-228ENST00000508974 GIN1Q9NXP7 522 aa13.39□□□□□ -0.27
UBE2D3-228ENST00000508974 CRIM1Q9NZV1 1036 aa13.39□□□□□ -0.27
UBE2D3-228ENST00000508974 CLCF1Q9UBD9 225 aa13.39□□□□□ -0.27
UBE2D3-228ENST00000508974 EIF3LQ9Y262 564 aaKnown RBP13.39□□□□□ -0.27
UBE2D3-228ENST00000508974 MRPS18CQ9Y3D5 142 aaKnown RBP13.39□□□□□ -0.27
UBE2D3-228ENST00000508974 ZNF337Q9Y3M9 751 aa13.39□□□□□ -0.27
UBE2D3-228ENST00000508974 HRNRQ86YZ3 2850 aaPredicted RBP13.38□□□□□ -0.27
UBE2D3-228ENST00000508974 NPIPA5A0A0B4J1W7 369 aa13.38□□□□□ -0.27
UBE2D3-228ENST00000508974 OR2M5A3KFT3 312 aa13.38□□□□□ -0.27
UBE2D3-228ENST00000508974 TTC36A6NLP5 189 aa13.38□□□□□ -0.27
UBE2D3-228ENST00000508974 NPIPA7E9PJI5 369 aa13.38□□□□□ -0.27
UBE2D3-228ENST00000508974 SYT5O00445 386 aa13.38□□□□□ -0.27
UBE2D3-228ENST00000508974 NDUFB5O43674 189 aa13.38□□□□□ -0.27
UBE2D3-228ENST00000508974 TGM6O95932 706 aa13.38□□□□□ -0.27
UBE2D3-228ENST00000508974 NPIPA8P0DM63 369 aa13.38□□□□□ -0.27
UBE2D3-228ENST00000508974 CAPN3P20807 821 aa13.38□□□□□ -0.27
UBE2D3-228ENST00000508974 OPRM1P35372 400 aa13.38□□□□□ -0.27
UBE2D3-228ENST00000508974 SLC1A6P48664 564 aa13.38□□□□□ -0.27
UBE2D3-228ENST00000508974 CCT3P49368 545 aaKnown RBP13.38□□□□□ -0.27
UBE2D3-228ENST00000508974 PRIM2P49643 509 aa13.38□□□□□ -0.27
UBE2D3-228ENST00000508974 POU6F2P78424 691 aaPredicted RBP13.38□□□□□ -0.27
UBE2D3-228ENST00000508974 C17orf67Q0P5P2 114 aa13.38□□□□□ -0.27
UBE2D3-228ENST00000508974 GANABQ14697 944 aaKnown RBP13.38□□□□□ -0.27
UBE2D3-228ENST00000508974 PPP4R4Q6NUP7 873 aa13.38□□□□□ -0.27
UBE2D3-228ENST00000508974 CHMP1BQ7LBR1 199 aa13.38□□□□□ -0.27
UBE2D3-228ENST00000508974 ADGRE4PQ86SQ3 457 aa13.38□□□□□ -0.27
UBE2D3-228ENST00000508974 HOXB13Q92826 284 aaPredicted RBP13.38□□□□□ -0.27
UBE2D3-228ENST00000508974 GPATCH1Q9BRR8 931 aaKnown RBP13.38□□□□□ -0.27
UBE2D3-228ENST00000508974 SSU72Q9NP77 194 aaKnown RBP13.38□□□□□ -0.27
UBE2D3-228ENST00000508974 NTMQ9P121 344 aa13.38□□□□□ -0.27
UBE2D3-228ENST00000508974 CELSR1Q9NYQ6 3014 aa13.37□□□□□ -0.27
UBE2D3-228ENST00000508974 AKAP9Q99996 3911 aa13.37□□□□□ -0.27
UBE2D3-228ENST00000508974 TM9SF1O15321 606 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms