RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 SYT14P1Q58G82 188 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 ATAD3CQ5T2N8 411 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 FIGLAQ6QHK4 219 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 FAM131AQ6UXB0 335 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 CCDC116Q8IYX3 515 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 SIX5Q8N196 739 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 OR4K5Q8NGD3 323 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 TMEM163Q8TC26 289 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 UFD1Q92890 307 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 RFKQ969G6 155 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 ZNF582Q96NG8 517 aaPredicted RBP10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 PHOX2BQ99453 314 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 PINK1Q9BXM7 581 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 OR51I1Q9H343 314 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 TRIM45Q9H8W5 580 aaPredicted RBP10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 DDX28Q9NUL7 540 aaKnown RBP10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 TMEM74BQ9NUR3 256 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 WDFY3Q8IZQ1 3526 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 CFAP54Q96N23 3096 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 KIR2DS5A0A0G2JLQ3 304 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 A0A0G2JNG1 304 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 MEIOCA2RUB1 952 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 FAM227AF5H4B4 570 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 KIR2DS3K7RE56 304 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 CHST10O43529 356 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 TNFSF14O43557 240 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 PRKYO43930 277 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 DNAJB6O75190 326 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 SEMA7AO75326 666 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 TRIM3O75382 744 aaPredicted RBP10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 TYRP1P17643 537 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 NTSP30990 170 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 TSFMP43897 325 aaKnown RBP10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 RFX2P48378 723 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 PPP3R1P63098 170 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 ZXDAP98168 799 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 RGS1Q08116 209 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 KIR2DS5Q14953 304 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 ZNF79Q15937 498 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 SNAPC1Q16533 368 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 MINDY4Q4G0A6 757 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 LIPKQ5VXJ0 399 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 SLC48A1Q6P1K1 146 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 ZER1Q7Z7L7 766 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 RDH10Q8IZV5 341 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 VWA5B2Q8N398 1253 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 SRFBP1Q8NEF9 429 aaKnown RBP10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 TEX47Q8TBZ9 253 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 XAGE5Q8WWM1 108 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 RSC1A1Q92681 617 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 FGF11Q92914 225 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 GAL3ST3Q96A11 431 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 TM4SF19Q96DZ7 209 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 DIRAS2Q96HU8 199 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 LRR1Q96L50 414 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 BBS4Q96RK4 519 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 RSPO3Q9BXY4 272 aaPredicted RBP10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 ZCCHC3Q9NUD5 404 aaKnown RBP10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 CALML5Q9NZT1 146 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 PILRAQ9UKJ1 303 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 FBXL21Q9UKT6 434 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 CES1P1Q9UKY3 287 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 RBMX2Q9Y388 322 aaKnown RBP10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 SDK1Q7Z5N4 2213 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 C2orf74A8MZ97 194 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 HCRTR1O43613 425 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 TMCC2O75069 709 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 ALPPP05187 535 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 OR12D1P0DN82 309 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 GALP22466 123 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 MMP11P24347 488 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 HLA-DMAP28067 261 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 GABRA5P31644 462 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 PRKAG1P54619 331 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 MRPS15P82914 257 aaKnown RBP10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 PIN1Q13526 163 aaPredicted RBP10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 SLC35F1Q5T1Q4 408 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 SLC27A4Q6P1M0 643 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 TMEM107Q6UX40 140 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 SPATC1Q76KD6 591 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 PRSS41Q7RTY9 318 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 LAX1Q8IWV1 398 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 MORN4Q8NDC4 146 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 TOR1AIP2Q8NFQ8 470 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 OR56A1Q8NGH5 318 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 NT5CQ8TCD5 201 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 ZDHHC1Q8WTX9 485 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 EDAQ92838 391 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 ST6GAL2Q96JF0 529 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 ZFYVE21Q9BQ24 234 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 ABCB9Q9NP78 766 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 MED17Q9NVC6 651 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 TRPC4Q9UBN4 977 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 PLEKHB1Q9UF11 243 aaPredicted RBP10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 PHF11Q9UIL8 331 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 MRPS2Q9Y399 296 aaKnown RBP10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 SPIN1Q9Y657 262 aaPredicted RBP10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 TRDV1A0A1B0GX56 115 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 A0A1W2PQ09 198 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 A0A1W2PQL4 384 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms