RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 IL1RNP18510 177 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 HRH2P25021 359 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 PER3P56645 1201 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 KIAA1024LP59773 190 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 ERVK-21P61565 698 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 PPA1Q15181 289 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 DHCR24Q15392 516 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 SGPP2Q8IWX5 399 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 OR13C3Q8NGS6 347 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 OR10Z1Q8NGY1 313 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 OR2T4Q8NH00 348 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 OR51A7Q8NH64 312 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 FNDC9Q8TBE3 224 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 SFXN5Q8TD22 340 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 GPR148Q8TDV2 347 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 C16orf78Q8WTQ4 265 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 DOK1Q99704 481 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 TBL1XR1Q9BZK7 514 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 C20orf85Q9H1P6 137 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 LIN7BQ9HAP6 207 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.92□□□□□ -1.37e-8■□□□□ 11.3
UBE2D3-224ENST00000508474 ZNF223Q9UK11 482 aaPredicted RBP6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 TRAPPC4Q9Y296 219 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 ACTL7AQ9Y615 435 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 SDC1P18827 310 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 PPM1AP35813 382 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 NRG3P56975 720 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 UBE2KP61086 200 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 NKX3-2P78367 333 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 HSD11B2P80365 405 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 BCL2A1Q16548 175 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 AMZ1Q400G9 498 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 PSAPL1Q6NUJ1 521 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 KCNIP4Q6PIL6 250 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 NRMQ8IXM6 262 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 ZNF440Q8IYI8 595 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 OR5M3Q8NGP4 307 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 WDR20Q8TBZ3 569 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 WFIKKN2Q8TEU8 576 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 APIPQ96GX9 242 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 TMEM43Q9BTV4 400 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 G6PC3Q9BUM1 346 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 ZNF701Q9NV72 531 aaPredicted RBP6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 FMN2Q9NZ56 1722 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 A0A0A6YYH2 397 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 SLC22A23A1A5C7 686 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 A6NJ64 397 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 ONECUT3O60422 494 aaPredicted RBP6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 CSO75390 466 aaKnown RBP6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 HTR3BO95264 441 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 DIRAS3O95661 229 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 H2BFMP0C1H6 154 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 CCR9P51686 369 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 RPS25P62851 125 aaKnown RBP6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 ILKQ13418 452 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 GPR157Q5UAW9 335 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 PM20D1Q6GTS8 502 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 H3F3CQ6NXT2 135 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 CXCL17Q6UXB2 119 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 MEPCEQ7L2J0 689 aaKnown RBP6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 DPPA2Q7Z7J5 298 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 C14orf80Q86SX3 495 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 LRRTM4Q86VH4 590 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 CACUL1Q86Y37 369 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 SIAH3Q8IW03 269 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 ZNF679Q8IYX0 411 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 GPR135Q8IZ08 494 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 KCT2Q8NC54 265 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 OR4K14Q8NGD5 310 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 PCNPQ8WW12 178 aaKnown RBP6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 PHYHIPQ92561 330 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 ATOH8Q96SQ7 321 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 SLC12A9Q9BXP2 914 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 ALOXE3Q9BYJ1 711 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 PITHD1Q9GZP4 211 aaPredicted RBP6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 TSPAN10Q9H1Z9 355 aaPredicted RBP6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 INIPQ9NRY2 104 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 SEMA4GQ9NTN9 838 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 GMEB2Q9UKD1 530 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 PCYT1BQ9Y5K3 369 aaPredicted RBP6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 WIF1Q9Y5W5 379 aa6.92□□□□□ -1.3
UBE2D3-224ENST00000508474 TMEM82A0PJX8 343 aa6.91□□□□□ -1.3
UBE2D3-224ENST00000508474 TSPAN11A1L157 253 aa6.91□□□□□ -1.3
UBE2D3-224ENST00000508474 SOWAHBA6NEL2 793 aa6.91□□□□□ -1.3
UBE2D3-224ENST00000508474 OR6C6A6NF89 314 aa6.91□□□□□ -1.3
UBE2D3-224ENST00000508474 LATO43561 262 aa6.91□□□□□ -1.3
UBE2D3-224ENST00000508474 EOMESO95936 686 aa6.91□□□□□ -1.3
UBE2D3-224ENST00000508474 GP1BBP13224 206 aa6.91□□□□□ -1.3
UBE2D3-224ENST00000508474 TNFRSF1BP20333 461 aa6.91□□□□□ -1.3
UBE2D3-224ENST00000508474 SLC6A9P48067 706 aa6.91□□□□□ -1.3
UBE2D3-224ENST00000508474 SEC61A1P61619 476 aaKnown RBP6.91□□□□□ -1.3
UBE2D3-224ENST00000508474 SNRPGP62308 76 aaKnown RBP6.91□□□□□ -1.3
UBE2D3-224ENST00000508474 RING1Q06587 406 aa6.91□□□□□ -1.3
UBE2D3-224ENST00000508474 MAP2K5Q13163 448 aa6.91□□□□□ -1.3
UBE2D3-224ENST00000508474 EXOSC2Q13868 293 aaKnown RBP6.91□□□□□ -1.3
UBE2D3-224ENST00000508474 TMEM35AQ53FP2 167 aa6.91□□□□□ -1.3
UBE2D3-224ENST00000508474 TANGO2Q6ICL3 276 aa6.91□□□□□ -1.3
UBE2D3-224ENST00000508474 NLRC3Q7RTR2 1065 aa6.91□□□□□ -1.3
UBE2D3-224ENST00000508474 SLC29A4Q7RTT9 530 aa6.91□□□□□ -1.3
UBE2D3-224ENST00000508474 GPR155Q7Z3F1 870 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms