RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 PSMC3IPQ9P2W1 217 aaPredicted RBP4.19□□□□□ -1.74
NUP54-206ENST00000508465 TEKT2Q9UIF3 430 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 ZNF225Q9UK10 706 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 ZNF223Q9UK11 482 aaPredicted RBP4.19□□□□□ -1.74
NUP54-206ENST00000508465 SLC12A4Q9UP95 1085 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 ASB4Q9Y574 426 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 TIMM22Q9Y584 194 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 CLCA3PQ9Y6N3 262 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 HECTD1Q9ULT8 2610 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 A0A0A6YYD5 115 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 A1L4Q6 167 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 SAGE2PA6NJ88 616 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 C17orf105B2RV13 164 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 NPIPA5E9PKD4 350 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 G3V2L1 256 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 STX16-NPEPL1H3BU86 382 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 FOXE1O00358 373 aaPredicted RBP4.18□□□□□ -1.74
NUP54-206ENST00000508465 UBFD1O14562 309 aaKnown RBP4.18□□□□□ -1.74
NUP54-206ENST00000508465 STX16O14662 325 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 LRRTM2O43300 516 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 OR10H2O60403 315 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 ZNF354AO60765 605 aaPredicted RBP4.18□□□□□ -1.74
NUP54-206ENST00000508465 SPAG7O75391 227 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 NME6O75414 186 aaPredicted RBP4.18□□□□□ -1.74
NUP54-206ENST00000508465 OR2J2O76002 312 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 NEURL1O76050 574 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 ZFAND5O76080 213 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 PDE9AO76083 593 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 OR6B1O95007 311 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 UNC5CO95185 931 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 RASAL1O95294 804 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 SLU7O95391 586 aaKnown RBP4.18□□□□□ -1.74
NUP54-206ENST00000508465 GPR75O95800 540 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 OTCP00480 354 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 MYL2P10916 166 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 CPA3P15088 417 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 CREB1P16220 341 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 TAC1P20366 129 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 ATP5F1P24539 256 aaPredicted RBP4.18□□□□□ -1.74
NUP54-206ENST00000508465 GSTM2P28161 218 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 SERPINB3P29508 390 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 TLX1P31314 330 aaPredicted RBP4.18□□□□□ -1.74
NUP54-206ENST00000508465 HPDP32754 393 aaPredicted RBP4.18□□□□□ -1.74
NUP54-206ENST00000508465 TSFMP43897 325 aaKnown RBP4.18□□□□□ -1.74
NUP54-206ENST00000508465 HTR3AP46098 478 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 HTR6P50406 440 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 HLCSP50747 726 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 GPR143P51810 404 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 SLC16A1P53985 500 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 PRKAA2P54646 552 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 NAGLUP54802 743 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 TAS2R50P59544 299 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 AP2B1P63010 937 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 HERVK_113P63132 956 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 HMGCS1Q01581 520 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 FOLH1Q04609 750 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 CUL3Q13618 768 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 ZNF267Q14586 743 aaPredicted RBP4.18□□□□□ -1.74
NUP54-206ENST00000508465 ZNF678Q5SXM1 525 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 CCNYL2Q5T2Q4 361 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 FHL5Q5TD97 284 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 SLC25A25Q6KCM7 469 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 TMEM64Q6YI46 380 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 HSDL2Q6YN16 418 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 GPRIN3Q6ZVF9 776 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 GALNTL5Q7Z4T8 443 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 MDGA2Q7Z553 956 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 DTX2Q86UW9 622 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 C4orf33Q8N1A6 199 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 MIER2Q8N344 545 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 SLC5A8Q8N695 610 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 BCORP1Q8N888 145 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 CCDC63Q8NA47 563 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 APCDD1LQ8NCL9 501 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 PSD4Q8NDX1 1056 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 MDS2Q8NDY4 140 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 SRFBP1Q8NEF9 429 aaKnown RBP4.18□□□□□ -1.74
NUP54-206ENST00000508465 B3GNT7Q8NFL0 401 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 METTL6Q8TCB7 284 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 FAR1Q8WVX9 515 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 SELENOMQ8WWX9 145 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 TANKQ92844 425 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 RBM18Q96H35 190 aaKnown RBP4.18□□□□□ -1.74
NUP54-206ENST00000508465 TMEM237Q96Q45 408 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 KCNA7Q96RP8 456 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 SERPINI1Q99574 410 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 CENPKQ9BS16 269 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 NTMT1Q9BV86 223 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 ERVK-6Q9BXR3 956 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 ZNF717Q9BY31 904 aaPredicted RBP4.18□□□□□ -1.74
NUP54-206ENST00000508465 PARD6BQ9BYG5 372 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 ROGDIQ9GZN7 287 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 ELOVL6Q9H5J4 265 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 DDX31Q9H8H2 851 aaKnown RBP4.18□□□□□ -1.74
NUP54-206ENST00000508465 ADAP2Q9NPF8 381 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 AGPAT4Q9NRZ5 378 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 OLAHQ9NV23 265 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 TEX10Q9NXF1 929 aaPredicted RBP4.18□□□□□ -1.74
NUP54-206ENST00000508465 LRFN1Q9P244 771 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 DCDC2Q9UHG0 476 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms