RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 C7orf72A4D263 438 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 NOTOA8MTQ0 251 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 C17orf105B2RV13 164 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 NPIPA5E9PKD4 350 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 PLPP1O14494 284 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 AIM2O14862 343 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 CLOCKO15516 846 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 LDB3O75112 727 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 OR2J2O76002 312 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 WISP2O76076 250 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 SEMA3DO95025 777 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 GPR75O95800 540 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 KRT8P05787 483 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 COX7A2P14406 83 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 GALNSP34059 522 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 BSGP35613 385 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 DCTP40126 519 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 BUD31P41223 144 aaPredicted RBP7.41□□□□□ -1.22
SCN1A-207ENST00000507401 PSME3P61289 254 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 RNF4P78317 190 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 CEACAM7Q14002 265 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 SQLEQ14534 574 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 CPSF6Q16630 551 aaKnown RBP eCLIP7.41□□□□□ -1.22
SCN1A-207ENST00000507401 MPEG1Q2M385 716 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 MTX3Q5HYI7 312 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 TECRLQ5HYJ1 363 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 GPR107Q5VW38 600 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 TTC23Q5W5X9 447 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 HIST2H2BCQ6DN03 193 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 MRM1Q6IN84 353 aaKnown RBP7.41□□□□□ -1.22
SCN1A-207ENST00000507401 OPN5Q6U736 354 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 HDDC2Q7Z4H3 204 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 MDGA2Q7Z553 956 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 GOLGA7Q7Z5G4 137 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 MRGPRGQ86SM5 289 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 DHFR2Q86XF0 187 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 EID3Q8N140 333 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 CYP4Z2PQ8N1L4 340 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 PLD6Q8N2A8 252 aaKnown RBP7.41□□□□□ -1.22
SCN1A-207ENST00000507401 GHDCQ8N2G8 530 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 ZNF808Q8N4W9 903 aaPredicted RBP7.41□□□□□ -1.22
SCN1A-207ENST00000507401 SLC15A4Q8N697 577 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 NUBPLQ8TB37 319 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 WDR20Q8TBZ3 569 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 HDAC2Q92769 488 aaKnown RBP7.41□□□□□ -1.22
SCN1A-207ENST00000507401 ATP6V1E2Q96A05 226 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 CCDC126Q96EE4 140 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 ZNF486Q96H40 463 aaPredicted RBP7.41□□□□□ -1.22
SCN1A-207ENST00000507401 CCDC120Q96HB5 630 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 SENP5Q96HI0 755 aaPredicted RBP7.41□□□□□ -1.22
SCN1A-207ENST00000507401 ART5Q96L15 291 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 MTERF1Q99551 399 aaKnown RBP7.41□□□□□ -1.22
SCN1A-207ENST00000507401 MRPL57Q9BQC6 102 aaKnown RBP7.41□□□□□ -1.22
SCN1A-207ENST00000507401 PELOQ9BRX2 385 aaKnown RBP7.41□□□□□ -1.22
SCN1A-207ENST00000507401 DCUN1D5Q9BTE7 237 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 MECRQ9BV79 373 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 C1QTNF3Q9BXJ4 246 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 ZNF717Q9BY31 904 aaPredicted RBP7.41□□□□□ -1.22
SCN1A-207ENST00000507401 SLA2Q9H6Q3 261 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 NOL11Q9H8H0 719 aaKnown RBP7.41□□□□□ -1.22
SCN1A-207ENST00000507401 AKIP1Q9NQ31 210 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 LYARQ9NX58 379 aaKnown RBP7.41□□□□□ -1.22
SCN1A-207ENST00000507401 SMPD3Q9NY59 655 aaPredicted RBP7.41□□□□□ -1.22
SCN1A-207ENST00000507401 AHSPQ9NZD4 102 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 ADAM29Q9UKF5 820 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 NPIPA1Q9UND3 350 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 PRELID1Q9Y255 219 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 ATG4BQ9Y4P1 393 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 ASB4Q9Y574 426 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 PCDHGB1Q9Y5G3 927 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 NOX1Q9Y5S8 564 aa7.41□□□□□ -1.22
SCN1A-207ENST00000507401 LOC100653049A0A140TA62 436 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 A0A1W2PPW3 197 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 A8MVJ9 347 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 SAP18O00422 153 aaKnown RBP7.4□□□□□ -1.22
SCN1A-207ENST00000507401 OR7A17O14581 309 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 PRRG2O14669 202 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 FGF17O60258 216 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 PRKNO60260 465 aaPredicted RBP7.4□□□□□ -1.22
SCN1A-207ENST00000507401 NPHS1O60500 1241 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 SH3BGRLO75368 114 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 KRT34O76011 436 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 ALX3O95076 343 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 SNX4O95219 450 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 SIX3O95343 332 aaPredicted RBP7.4□□□□□ -1.22
SCN1A-207ENST00000507401 ETHE1O95571 254 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 IGKV3-11P04433 115 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 HSD17B1P14061 328 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 CNR1P21554 472 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 MEOX1P50221 254 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 ST13P50502 369 aaKnown RBP7.4□□□□□ -1.22
SCN1A-207ENST00000507401 SMSP52788 366 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 PPP5CP53041 499 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 DEFA1P59665 94 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 DEFA3P59666 94 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 RPS13P62277 151 aaKnown RBP7.4□□□□□ -1.22
SCN1A-207ENST00000507401 TNFRSF17Q02223 184 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 PLAURQ03405 335 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 MVKQ03426 396 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 GALNT1Q10472 559 aaPredicted RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms