RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 CALB2P22676 271 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 SLC6A2P23975 617 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 CHMP24386 653 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 ELK4P28324 431 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 SRD5A2P31213 254 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 MVDP53602 400 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 DSCR4P56555 118 aaPredicted RBP7.75□□□□□ -1.17
PDGFC-205ENST00000506880 CORO7P57737 925 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 KCNJ2P63252 427 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 EEF1A1P68104 462 aaKnown RBP7.75□□□□□ -1.17
PDGFC-205ENST00000506880 ALDH6A1Q02252 535 aaKnown RBP7.75□□□□□ -1.17
PDGFC-205ENST00000506880 FOXO1Q12778 655 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 ART3Q13508 389 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 LY6DQ14210 128 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 LARS2Q15031 903 aaKnown RBP7.75□□□□□ -1.17
PDGFC-205ENST00000506880 BCL2A1Q16548 175 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 KLHL26Q53HC5 615 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 SOWAHCQ53LP3 525 aaPredicted RBP7.75□□□□□ -1.17
PDGFC-205ENST00000506880 RNF220Q5VTB9 566 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 EEF1A1P5Q5VTE0 462 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 SPINK14Q6IE38 97 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 REEP3Q6NUK4 255 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 FAM180BQ6P0A1 224 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 ARHGAP11AQ6P4F7 1023 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 EIF3MQ7L2H7 374 aaKnown RBP7.75□□□□□ -1.17
PDGFC-205ENST00000506880 GALNTL5Q7Z4T8 443 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 PATL1Q86TB9 770 aaKnown RBP7.75□□□□□ -1.17
PDGFC-205ENST00000506880 RNF130Q86XS8 419 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 PLCZ1Q86YW0 608 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 SULF2Q8IWU5 870 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 PM20D2Q8IYS1 436 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 GHDCQ8N2G8 530 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 ZNF843Q8N446 348 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 FADS6Q8N9I5 356 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 Q8NA96 180 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 HIPK4Q8NE63 616 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 OR10G3Q8NGC4 313 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 OR1J4Q8NGS1 313 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 BCAS4Q8TDM0 211 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 VPS33AQ96AX1 596 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 ZBTB8AQ96BR9 441 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 ARSGQ96EG1 525 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 RMND5BQ96G75 393 aaPredicted RBP7.75□□□□□ -1.17
PDGFC-205ENST00000506880 SIGLEC12Q96PQ1 595 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 ADOQ96SZ5 270 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 CPPED1Q9BRF8 314 aaPredicted RBP7.75□□□□□ -1.17
PDGFC-205ENST00000506880 POLR2J2Q9GZM3 115 aaKnown RBP7.75□□□□□ -1.17
PDGFC-205ENST00000506880 POLR2J3Q9H1A7 115 aaKnown RBP7.75□□□□□ -1.17
PDGFC-205ENST00000506880 OR51I1Q9H343 314 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 UBQLN3Q9H347 655 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 MUC13Q9H3R2 512 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 KAT8Q9H7Z6 458 aaKnown RBP7.75□□□□□ -1.17
PDGFC-205ENST00000506880 EQTNQ9NQ60 294 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 ZNF71Q9NQZ8 489 aaPredicted RBP7.75□□□□□ -1.17
PDGFC-205ENST00000506880 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.75□□□□□ -1.17
PDGFC-205ENST00000506880 OLAHQ9NV23 265 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 PAQR5Q9NXK6 330 aaPredicted RBP7.75□□□□□ -1.17
PDGFC-205ENST00000506880 KLRF1Q9NZS2 232 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 TAGLN3Q9UI15 199 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 ANGPT4Q9Y264 503 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 DTNAQ9Y4J8 743 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 PHF3Q92576 2039 aaKnown RBP7.74□□□□□ -1.17
PDGFC-205ENST00000506880 BAHCC1Q9P281 2608 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 HTR3EA5X5Y0 456 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 AGAP5A6NIR3 686 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 TTLL8A6PVC2 850 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 SYT5O00445 386 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 AQP7O14520 342 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 BCKDKO14874 412 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 NDUFB5O43674 189 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 ICOSLGO75144 302 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 OXSR1O95747 527 aaPredicted RBP7.74□□□□□ -1.17
PDGFC-205ENST00000506880 TFPTP0C1Z6 253 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 CCL3P10147 92 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 NR2F1P10589 423 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 CYP4B1P13584 511 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 NID1P14543 1247 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 PRKAR1BP31321 381 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 DCTP40126 519 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 CRATP43155 626 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 HTR3AP46098 478 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 MASP1P48740 699 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 MEOX1P50221 254 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 GAS1P54826 345 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 NME5P56597 212 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 EEFSECP57772 596 aaKnown RBP7.74□□□□□ -1.17
PDGFC-205ENST00000506880 FBXW4P57775 412 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 NFATC3Q12968 1075 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 RAPSNQ13702 412 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 SLC10A1Q14973 349 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 INPP5JQ15735 1006 aaPredicted RBP7.74□□□□□ -1.17
PDGFC-205ENST00000506880 FLYWCH1Q4VC44 716 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 LIN52Q52LA3 116 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 GCNT6Q5T4J0 391 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 ZNF468Q5VIY5 522 aaPredicted RBP7.74□□□□□ -1.17
PDGFC-205ENST00000506880 FCRLBQ6BAA4 426 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 REP15Q6BDI9 236 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 C8orf82Q6P1X6 216 aaPredicted RBP7.74□□□□□ -1.17
PDGFC-205ENST00000506880 AAGABQ6PD74 315 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 C16orf89Q6UX73 402 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms