RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 G3V3Y1 287 aa11.75□□□□□ -0.53
TCOF1-210ENST00000506767 KIAA0513O60268 411 aa11.75□□□□□ -0.53
TCOF1-210ENST00000506767 RASAL1O95294 804 aa11.75□□□□□ -0.53
TCOF1-210ENST00000506767 H6PDO95479 791 aa11.75□□□□□ -0.53
TCOF1-210ENST00000506767 CBX6O95503 412 aa11.75□□□□□ -0.53
TCOF1-210ENST00000506767 ARAFP10398 606 aa11.75□□□□□ -0.53
TCOF1-210ENST00000506767 NR2F1P10589 423 aa11.75□□□□□ -0.53
TCOF1-210ENST00000506767 CPA2P48052 419 aa11.75□□□□□ -0.53
TCOF1-210ENST00000506767 DNASE1L1P49184 302 aa11.75□□□□□ -0.53
TCOF1-210ENST00000506767 MEOX1P50221 254 aa11.75□□□□□ -0.53
TCOF1-210ENST00000506767 ATP12AP54707 1039 aa11.75□□□□□ -0.53
TCOF1-210ENST00000506767 CHRNEQ04844 493 aa11.75□□□□□ -0.53
TCOF1-210ENST00000506767 ART3Q13508 389 aa11.75□□□□□ -0.53
TCOF1-210ENST00000506767 ZNF141Q15928 474 aa11.75□□□□□ -0.53
TCOF1-210ENST00000506767 HYAL4Q2M3T9 481 aa11.75□□□□□ -0.53
TCOF1-210ENST00000506767 FLYWCH1Q4VC44 716 aa11.75□□□□□ -0.53
TCOF1-210ENST00000506767 GPAT3Q53EU6 434 aa11.75□□□□□ -0.53
TCOF1-210ENST00000506767 KLHL26Q53HC5 615 aa11.75□□□□□ -0.53
TCOF1-210ENST00000506767 COLEC12Q5KU26 742 aa11.75□□□□□ -0.53
TCOF1-210ENST00000506767 GCNT6Q5T4J0 391 aa11.75□□□□□ -0.53
TCOF1-210ENST00000506767 FNDC7Q5VTL7 733 aa11.75□□□□□ -0.53
TCOF1-210ENST00000506767 PRAMEF8Q5VWM4 474 aa11.75□□□□□ -0.53
TCOF1-210ENST00000506767 PRAMEF7Q5VXH5 474 aa11.75□□□□□ -0.53
TCOF1-210ENST00000506767 ZNF605Q86T29 641 aa11.75□□□□□ -0.53
TCOF1-210ENST00000506767 PTOV1Q86YD1 416 aa11.75□□□□□ -0.53
TCOF1-210ENST00000506767 SLC15A3Q8IY34 581 aa11.75□□□□□ -0.53
TCOF1-210ENST00000506767 ZNF843Q8N446 348 aa11.75□□□□□ -0.53
TCOF1-210ENST00000506767 METTL25Q8N6Q8 603 aa11.75□□□□□ -0.53
TCOF1-210ENST00000506767 FAM98AQ8NCA5 519 aaKnown RBP11.75□□□□□ -0.53
TCOF1-210ENST00000506767 OIT3Q8WWZ8 545 aa11.75□□□□□ -0.53
TCOF1-210ENST00000506767 MAL2Q969L2 176 aa11.75□□□□□ -0.53
TCOF1-210ENST00000506767 TMEM19Q96HH6 336 aa11.75□□□□□ -0.53
TCOF1-210ENST00000506767 NSL1Q96IY1 281 aa11.75□□□□□ -0.53
TCOF1-210ENST00000506767 DOHHQ9BU89 302 aa11.75□□□□□ -0.53
TCOF1-210ENST00000506767 OSBPL11Q9BXB4 747 aa11.75□□□□□ -0.53
TCOF1-210ENST00000506767 METTL7AQ9H8H3 244 aa11.75□□□□□ -0.53
TCOF1-210ENST00000506767 GALNT9Q9HCQ5 603 aa11.75□□□□□ -0.53
TCOF1-210ENST00000506767 BCL2L10Q9HD36 194 aa11.75□□□□□ -0.53
TCOF1-210ENST00000506767 TUBA8Q9NY65 449 aaPredicted RBP11.75□□□□□ -0.53
TCOF1-210ENST00000506767 KCNE5Q9UJ90 142 aa11.75□□□□□ -0.53
TCOF1-210ENST00000506767 MKLN1Q9UL63 735 aa11.75□□□□□ -0.53
TCOF1-210ENST00000506767 WDR45Q9Y484 360 aa11.75□□□□□ -0.53
TCOF1-210ENST00000506767 DSPPQ9NZW4 1301 aa11.75□□□□□ -0.53
TCOF1-210ENST00000506767 C15orf38-AP3S2A0A0A6YYH1 394 aa11.74□□□□□ -0.53
TCOF1-210ENST00000506767 NPIPA5A0A0B4J1W7 369 aa11.74□□□□□ -0.53
TCOF1-210ENST00000506767 NPIPA7E9PJI5 369 aa11.74□□□□□ -0.53
TCOF1-210ENST00000506767 SNPHO15079 494 aa11.74□□□□□ -0.53
TCOF1-210ENST00000506767 SUV39H1O43463 412 aa11.74□□□□□ -0.53
TCOF1-210ENST00000506767 SLC28A2O43868 658 aa11.74□□□□□ -0.53
TCOF1-210ENST00000506767 UGT2B17O75795 530 aa11.74□□□□□ -0.53
TCOF1-210ENST00000506767 GLSO94925 669 aaPredicted RBP11.74□□□□□ -0.53
TCOF1-210ENST00000506767 BCHEP06276 602 aa11.74□□□□□ -0.53
TCOF1-210ENST00000506767 NPIPA8P0DM63 369 aa11.74□□□□□ -0.53
TCOF1-210ENST00000506767 ESRRAP11474 423 aaPredicted RBP11.74□□□□□ -0.53
TCOF1-210ENST00000506767 DCTP40126 519 aa11.74□□□□□ -0.53
TCOF1-210ENST00000506767 CRISP3P54108 245 aa11.74□□□□□ -0.53
TCOF1-210ENST00000506767 KCNJ2P63252 427 aa11.74□□□□□ -0.53
TCOF1-210ENST00000506767 CBX1P83916 185 aa11.74□□□□□ -0.53
TCOF1-210ENST00000506767 PMP22Q01453 160 aa11.74□□□□□ -0.53
TCOF1-210ENST00000506767 RBBP4Q09028 425 aa11.74□□□□□ -0.53
TCOF1-210ENST00000506767 GNA13Q14344 377 aa11.74□□□□□ -0.53
TCOF1-210ENST00000506767 INPP5JQ15735 1006 aaPredicted RBP11.74□□□□□ -0.53
TCOF1-210ENST00000506767 GPR68Q15743 365 aa11.74□□□□□ -0.53
TCOF1-210ENST00000506767 ARPINQ7Z6K5 226 aa11.74□□□□□ -0.53
TCOF1-210ENST00000506767 MARCH3Q86UD3 253 aa11.74□□□□□ -0.53
TCOF1-210ENST00000506767 ZNF619Q8N2I2 560 aa11.74□□□□□ -0.53
TCOF1-210ENST00000506767 OR10A6Q8NH74 314 aa11.74□□□□□ -0.53
TCOF1-210ENST00000506767 FBXO27Q8NI29 283 aa11.74□□□□□ -0.53
TCOF1-210ENST00000506767 ZG16BQ96DA0 208 aa11.74□□□□□ -0.53
TCOF1-210ENST00000506767 ZNF583Q96ND8 569 aa11.74□□□□□ -0.53
TCOF1-210ENST00000506767 BARD1Q99728 777 aaKnown RBP11.74□□□□□ -0.53
TCOF1-210ENST00000506767 SPATA9Q9BWV2 254 aa11.74□□□□□ -0.53
TCOF1-210ENST00000506767 MTHFD2LQ9H903 347 aaPredicted RBP11.74□□□□□ -0.53
TCOF1-210ENST00000506767 ZFP64Q9NPA5 681 aa11.74□□□□□ -0.53
TCOF1-210ENST00000506767 CMTM6Q9NX76 183 aa11.74□□□□□ -0.53
TCOF1-210ENST00000506767 KLRF1Q9NZS2 232 aa11.74□□□□□ -0.53
TCOF1-210ENST00000506767 CALML5Q9NZT1 146 aa11.74□□□□□ -0.53
TCOF1-210ENST00000506767 ABCD2Q9UBJ2 740 aa11.74□□□□□ -0.53
TCOF1-210ENST00000506767 NTNG1Q9Y2I2 539 aa11.74□□□□□ -0.53
TCOF1-210ENST00000506767 WIF1Q9Y5W5 379 aa11.74□□□□□ -0.53
TCOF1-210ENST00000506767 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.74□□□□□ -0.53
TCOF1-210ENST00000506767 CNTRLQ7Z7A1 2325 aa11.74□□□□□ -0.53
TCOF1-210ENST00000506767 A0A0G2JPF8 293 aa11.73□□□□□ -0.53
TCOF1-210ENST00000506767 CENPVL1A0A0U1RR11 272 aa11.73□□□□□ -0.53
TCOF1-210ENST00000506767 C2orf72A6NCS6 295 aa11.73□□□□□ -0.53
TCOF1-210ENST00000506767 TMEM247A6NEH6 219 aa11.73□□□□□ -0.53
TCOF1-210ENST00000506767 LRRC3CA6NJW4 275 aa11.73□□□□□ -0.53
TCOF1-210ENST00000506767 CCT8L1PA6NM43 557 aa11.73□□□□□ -0.53
TCOF1-210ENST00000506767 HNRNPCL2B2RXH8 293 aa11.73□□□□□ -0.53
TCOF1-210ENST00000506767 B4DXG7 233 aa11.73□□□□□ -0.53
TCOF1-210ENST00000506767 HNRNPCL3B7ZW38 293 aa11.73□□□□□ -0.53
TCOF1-210ENST00000506767 HNRNPCL1O60812 293 aaKnown RBP11.73□□□□□ -0.53
TCOF1-210ENST00000506767 ANGPTL1O95841 491 aa11.73□□□□□ -0.53
TCOF1-210ENST00000506767 HNRNPCL4P0DMR1 293 aa11.73□□□□□ -0.53
TCOF1-210ENST00000506767 RPS4Y1P22090 263 aaKnown RBP11.73□□□□□ -0.53
TCOF1-210ENST00000506767 CALB2P22676 271 aa11.73□□□□□ -0.53
TCOF1-210ENST00000506767 ADH7P40394 386 aa11.73□□□□□ -0.53
TCOF1-210ENST00000506767 CLK3P49761 638 aaKnown RBP11.73□□□□□ -0.53
TCOF1-210ENST00000506767 MNAT1P51948 309 aa11.73□□□□□ -0.53
TCOF1-210ENST00000506767 PSME3P61289 254 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms