RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 WI2-2373I1.2A0A1W2PRP0 233 aa1.96□□□□□ -2.1
GYPB-207ENST00000506679 FAM231BA6NCW3 169 aa1.96□□□□□ -2.1
GYPB-207ENST00000506679 SAGE2PA6NJ88 616 aa1.96□□□□□ -2.1
GYPB-207ENST00000506679 LRRC30A6NM36 301 aa1.96□□□□□ -2.1
GYPB-207ENST00000506679 H0Y9J4 135 aa1.96□□□□□ -2.1
GYPB-207ENST00000506679 LGALS8O00214 317 aa1.96□□□□□ -2.1
GYPB-207ENST00000506679 WWP2O00308 870 aa1.96□□□□□ -2.1
GYPB-207ENST00000506679 OR7A17O14581 309 aa1.96□□□□□ -2.1
GYPB-207ENST00000506679 TRIM3O75382 744 aaPredicted RBP1.96□□□□□ -2.1
GYPB-207ENST00000506679 SCRG1O75711 98 aa1.96□□□□□ -2.1
GYPB-207ENST00000506679 APBB3O95704 486 aa1.96□□□□□ -2.1
GYPB-207ENST00000506679 PGK1P00558 417 aa1.96□□□□□ -2.1
GYPB-207ENST00000506679 CHRNA1P02708 482 aa1.96□□□□□ -2.1
GYPB-207ENST00000506679 STSP08842 583 aa1.96□□□□□ -2.1
GYPB-207ENST00000506679 ANXA4P09525 319 aaPredicted RBP1.96□□□□□ -2.1
GYPB-207ENST00000506679 XRCC1P18887 633 aaPredicted RBP1.96□□□□□ -2.1
GYPB-207ENST00000506679 TSPAN8P19075 237 aa1.96□□□□□ -2.1
GYPB-207ENST00000506679 DNAJB1P25685 340 aa1.96□□□□□ -2.1
GYPB-207ENST00000506679 UGT1A3P35503 534 aa1.96□□□□□ -2.1
GYPB-207ENST00000506679 LIM2P55344 173 aa1.96□□□□□ -2.1
GYPB-207ENST00000506679 STX17P56962 302 aa1.96□□□□□ -2.1
GYPB-207ENST00000506679 RPL32P62910 135 aaKnown RBP1.96□□□□□ -2.1
GYPB-207ENST00000506679 RPL8P62917 257 aaKnown RBP1.96□□□□□ -2.1
GYPB-207ENST00000506679 OTUD4Q01804 1114 aaKnown RBP1.96□□□□□ -2.1
GYPB-207ENST00000506679 OC90Q02509 493 aaPredicted RBP1.96□□□□□ -2.1
GYPB-207ENST00000506679 EGFEM1PQ0D2K5 195 aa1.96□□□□□ -2.1
GYPB-207ENST00000506679 SPP2Q13103 211 aa1.96□□□□□ -2.1
GYPB-207ENST00000506679 KARSQ15046 597 aaKnown RBP1.96□□□□□ -2.1
GYPB-207ENST00000506679 C2orf83Q53S99 150 aa1.96□□□□□ -2.1
GYPB-207ENST00000506679 OR2B11Q5JQS5 317 aa1.96□□□□□ -2.1
GYPB-207ENST00000506679 SLX4IPQ5VYV7 408 aa1.96□□□□□ -2.1
GYPB-207ENST00000506679 SCARA5Q6ZMJ2 495 aa1.96□□□□□ -2.1
GYPB-207ENST00000506679 Q7L0L9 218 aa1.96□□□□□ -2.1
GYPB-207ENST00000506679 MOB1BQ7L9L4 216 aa1.96□□□□□ -2.1
GYPB-207ENST00000506679 C17orf82Q86X59 251 aaPredicted RBP1.96□□□□□ -2.1
GYPB-207ENST00000506679 TADA1Q96BN2 335 aa1.96□□□□□ -2.1
GYPB-207ENST00000506679 UPRTQ96BW1 309 aa1.96□□□□□ -2.1
GYPB-207ENST00000506679 TESK2Q96S53 571 aa1.96□□□□□ -2.1
GYPB-207ENST00000506679 KCNK16Q96T55 309 aa1.96□□□□□ -2.1
GYPB-207ENST00000506679 TMEM121Q9BTD3 319 aa1.96□□□□□ -2.1
GYPB-207ENST00000506679 NMUR2Q9GZQ4 415 aa1.96□□□□□ -2.1
GYPB-207ENST00000506679 EHD1Q9H4M9 534 aa1.96□□□□□ -2.1
GYPB-207ENST00000506679 ISG20L2Q9H9L3 353 aaKnown RBP1.96□□□□□ -2.1
GYPB-207ENST00000506679 ROPN1Q9HAT0 212 aaPredicted RBP1.96□□□□□ -2.1
GYPB-207ENST00000506679 LPAR2Q9HBW0 351 aa1.96□□□□□ -2.1
GYPB-207ENST00000506679 SAMD4AQ9UPU9 718 aaKnown RBP1.96□□□□□ -2.1
GYPB-207ENST00000506679 PIN4Q9Y237 131 aaKnown RBP1.96□□□□□ -2.1
GYPB-207ENST00000506679 MTF2Q9Y483 593 aaPredicted RBP1.96□□□□□ -2.1
GYPB-207ENST00000506679 GMPPBQ9Y5P6 360 aa1.96□□□□□ -2.1
GYPB-207ENST00000506679 CCDC7Q96M83 1385 aa1.96□□□□□ -2.1
GYPB-207ENST00000506679 MEGF6O75095 1541 aa1.96□□□□□ -2.1
GYPB-207ENST00000506679 ABCC4O15439 1325 aa1.95□□□□□ -2.1
GYPB-207ENST00000506679 FAM230AA0A1W2PPH8 454 aa1.95□□□□□ -2.1
GYPB-207ENST00000506679 WASHC1A8K0Z3 465 aa1.95□□□□□ -2.1
GYPB-207ENST00000506679 E9PLD3 99 aa1.95□□□□□ -2.1
GYPB-207ENST00000506679 PANO1I0J062 215 aa1.95□□□□□ -2.1
GYPB-207ENST00000506679 ZNF254O75437 659 aa1.95□□□□□ -2.1
GYPB-207ENST00000506679 SEMG1P04279 462 aa1.95□□□□□ -2.1
GYPB-207ENST00000506679 H2AFXP16104 143 aaPredicted RBP1.95□□□□□ -2.1
GYPB-207ENST00000506679 CCNA2P20248 432 aa1.95□□□□□ -2.1
GYPB-207ENST00000506679 PSMB1P20618 241 aaKnown RBP1.95□□□□□ -2.1
GYPB-207ENST00000506679 ASMTP46597 345 aa1.95□□□□□ -2.1
GYPB-207ENST00000506679 DIO3P55073 304 aa1.95□□□□□ -2.1
GYPB-207ENST00000506679 GNB2P62879 340 aa1.95□□□□□ -2.1
GYPB-207ENST00000506679 EXOSC2Q13868 293 aaKnown RBP1.95□□□□□ -2.1
GYPB-207ENST00000506679 ADPRMQ3LIE5 342 aa1.95□□□□□ -2.1
GYPB-207ENST00000506679 CCDC14Q49A88 953 aa1.95□□□□□ -2.1
GYPB-207ENST00000506679 TEX44Q53QW1 395 aa1.95□□□□□ -2.1
GYPB-207ENST00000506679 SPATA46Q5T0L3 261 aa1.95□□□□□ -2.1
GYPB-207ENST00000506679 OTPQ5XKR4 325 aa1.95□□□□□ -2.1
GYPB-207ENST00000506679 OR5M10Q6IEU7 315 aa1.95□□□□□ -2.1
GYPB-207ENST00000506679 RBM43Q6ZSC3 357 aaKnown RBP1.95□□□□□ -2.1
GYPB-207ENST00000506679 LPCAT2Q7L5N7 544 aa1.95□□□□□ -2.1
GYPB-207ENST00000506679 SYVN1Q86TM6 617 aa1.95□□□□□ -2.1
GYPB-207ENST00000506679 EFCAB13Q8IY85 973 aa1.95□□□□□ -2.1
GYPB-207ENST00000506679 SLC34A3Q8N130 599 aa1.95□□□□□ -2.1
GYPB-207ENST00000506679 CNNM3Q8NE01 707 aa1.95□□□□□ -2.1
GYPB-207ENST00000506679 OR5AU1Q8NGC0 362 aa1.95□□□□□ -2.1
GYPB-207ENST00000506679 SETD7Q8WTS6 366 aaKnown RBP1.95□□□□□ -2.1
GYPB-207ENST00000506679 PSMG2Q969U7 264 aa1.95□□□□□ -2.1
GYPB-207ENST00000506679 CCDC47Q96A33 483 aaKnown RBP1.95□□□□□ -2.1
GYPB-207ENST00000506679 HAVCR1Q96D42 359 aa1.95□□□□□ -2.1
GYPB-207ENST00000506679 C16orf74Q96GX8 76 aa1.95□□□□□ -2.1
GYPB-207ENST00000506679 NOL4LQ96MY1 436 aaPredicted RBP1.95□□□□□ -2.1
GYPB-207ENST00000506679 FAM111AQ96PZ2 611 aa1.95□□□□□ -2.1
GYPB-207ENST00000506679 PLEKHF1Q96S99 279 aa1.95□□□□□ -2.1
GYPB-207ENST00000506679 ZNF184Q99676 751 aaPredicted RBP1.95□□□□□ -2.1
GYPB-207ENST00000506679 CCSER1Q9C0I3 900 aa1.95□□□□□ -2.1
GYPB-207ENST00000506679 ACTR8Q9H981 624 aa1.95□□□□□ -2.1
GYPB-207ENST00000506679 C1orf123Q9NWV4 160 aa1.95□□□□□ -2.1
GYPB-207ENST00000506679 ADAM22Q9P0K1 906 aa1.95□□□□□ -2.1
GYPB-207ENST00000506679 ONECUT1Q9UBC0 465 aa1.95□□□□□ -2.1
GYPB-207ENST00000506679 CYTH4Q9UIA0 394 aa1.95□□□□□ -2.1
GYPB-207ENST00000506679 RNF6Q9Y252 685 aa1.95□□□□□ -2.1
GYPB-207ENST00000506679 GPRASP1Q5JY77 1395 aa1.95□□□□□ -2.1
GYPB-207ENST00000506679 ANKRD30BQ9BXX2 1392 aa1.95□□□□□ -2.1
GYPB-207ENST00000506679 NCAPD2Q15021 1401 aa1.94□□□□□ -2.1
GYPB-207ENST00000506679 A0A0U1RQV5 110 aa1.94□□□□□ -2.1
GYPB-207ENST00000506679 WASH3PC4AMC7 463 aa1.94□□□□□ -2.1
GYPB-207ENST00000506679 RASGRF2O14827 1237 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms