RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 PHF12Q96QT6 1004 aa16.61■□□□□ 0.25
PDLIM7-216ENST00000506537 SIKE1Q9BRV8 207 aa16.61■□□□□ 0.25
PDLIM7-216ENST00000506537 SLC52A3Q9NQ40 469 aa16.61■□□□□ 0.25
PDLIM7-216ENST00000506537 SPTAN1Q13813 2472 aaKnown RBP16.61■□□□□ 0.25
PDLIM7-216ENST00000506537 DIDO1Q9BTC0 2240 aaKnown RBP16.61■□□□□ 0.25
PDLIM7-216ENST00000506537 NPIPA5A0A0B4J1W7 369 aa16.6■□□□□ 0.25
PDLIM7-216ENST00000506537 OR14I1A6ND48 311 aa16.6■□□□□ 0.25
PDLIM7-216ENST00000506537 ALG1L2C9J202 215 aa16.6■□□□□ 0.25
PDLIM7-216ENST00000506537 NPIPA7E9PJI5 369 aa16.6■□□□□ 0.25
PDLIM7-216ENST00000506537 CCL21O00585 134 aa16.6■□□□□ 0.25
PDLIM7-216ENST00000506537 RFXANKO14593 260 aa16.6■□□□□ 0.25
PDLIM7-216ENST00000506537 PRRG2O14669 202 aa16.6■□□□□ 0.25
PDLIM7-216ENST00000506537 CBR3O75828 277 aa16.6■□□□□ 0.25
PDLIM7-216ENST00000506537 NPIPA8P0DM63 369 aa16.6■□□□□ 0.25
PDLIM7-216ENST00000506537 TBXA2RP21731 343 aa16.6■□□□□ 0.25
PDLIM7-216ENST00000506537 LCN1P31025 176 aa16.6■□□□□ 0.25
PDLIM7-216ENST00000506537 CHI3L1P36222 383 aaPredicted RBP16.6■□□□□ 0.25
PDLIM7-216ENST00000506537 MDH1P40925 334 aaKnown RBP16.6■□□□□ 0.25
PDLIM7-216ENST00000506537 LRRC74AQ0VAA2 488 aa16.6■□□□□ 0.25
PDLIM7-216ENST00000506537 FUT5Q11128 374 aa16.6■□□□□ 0.25
PDLIM7-216ENST00000506537 SQLEQ14534 574 aa16.6■□□□□ 0.25
PDLIM7-216ENST00000506537 TOMM20Q15388 145 aa16.6■□□□□ 0.25
PDLIM7-216ENST00000506537 GTDC1Q4AE62 458 aa16.6■□□□□ 0.25
PDLIM7-216ENST00000506537 WIPI1Q5MNZ9 446 aaPredicted RBP16.6■□□□□ 0.25
PDLIM7-216ENST00000506537 BLOC1S3Q6QNY0 202 aa16.6■□□□□ 0.25
PDLIM7-216ENST00000506537 ZNF621Q6ZSS3 439 aa16.6■□□□□ 0.25
PDLIM7-216ENST00000506537 OLIG3Q7RTU3 272 aa16.6■□□□□ 0.25
PDLIM7-216ENST00000506537 YRDCQ86U90 279 aaKnown RBP16.6■□□□□ 0.25
PDLIM7-216ENST00000506537 LURAP1LQ8IV03 231 aa16.6■□□□□ 0.25
PDLIM7-216ENST00000506537 CHDHQ8NE62 594 aaPredicted RBP16.6■□□□□ 0.25
PDLIM7-216ENST00000506537 CCDC120Q96HB5 630 aa16.6■□□□□ 0.25
PDLIM7-216ENST00000506537 G6PC3Q9BUM1 346 aa16.6■□□□□ 0.25
PDLIM7-216ENST00000506537 TMEM120AQ9BXJ8 343 aa16.6■□□□□ 0.25
PDLIM7-216ENST00000506537 TBL1XR1Q9BZK7 514 aa16.6■□□□□ 0.25
PDLIM7-216ENST00000506537 OR2B2Q9GZK3 357 aa16.6■□□□□ 0.25
PDLIM7-216ENST00000506537 EXO5Q9H790 373 aa16.6■□□□□ 0.25
PDLIM7-216ENST00000506537 PNPLA3Q9NST1 481 aa16.6■□□□□ 0.25
PDLIM7-216ENST00000506537 PPP4R1LQ9P1A2 415 aa16.6■□□□□ 0.25
PDLIM7-216ENST00000506537 SLC6A5Q9Y345 797 aa16.6■□□□□ 0.25
PDLIM7-216ENST00000506537 NR5A2O00482 541 aa16.59■□□□□ 0.25
PDLIM7-216ENST00000506537 ZG16O60844 167 aa16.59■□□□□ 0.25
PDLIM7-216ENST00000506537 SOX30O94993 753 aa16.59■□□□□ 0.25
PDLIM7-216ENST00000506537 ANGPTL1O95841 491 aa16.59■□□□□ 0.25
PDLIM7-216ENST00000506537 VIMP08670 466 aaKnown RBP16.59■□□□□ 0.25
PDLIM7-216ENST00000506537 OR12D1P0DN82 309 aa16.59■□□□□ 0.25
PDLIM7-216ENST00000506537 HOXB9P17482 250 aaPredicted RBP16.59■□□□□ 0.25
PDLIM7-216ENST00000506537 CAPN3P20807 821 aa16.59■□□□□ 0.25
PDLIM7-216ENST00000506537 CASP6P55212 293 aa16.59■□□□□ 0.25
PDLIM7-216ENST00000506537 SF3A3Q12874 501 aaKnown RBP eCLIP16.59■□□□□ 0.251e-9■■■■■ 64.3
PDLIM7-216ENST00000506537 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.59■□□□□ 0.25
PDLIM7-216ENST00000506537 HEPHL1Q6MZM0 1159 aa16.59■□□□□ 0.25
PDLIM7-216ENST00000506537 MYO7BQ6PIF6 2116 aa16.59■□□□□ 0.25
PDLIM7-216ENST00000506537 SLC2A7Q6PXP3 512 aa16.59■□□□□ 0.25
PDLIM7-216ENST00000506537 RNF130Q86XS8 419 aa16.59■□□□□ 0.25
PDLIM7-216ENST00000506537 TRIML2Q8N7C3 387 aa16.59■□□□□ 0.25
PDLIM7-216ENST00000506537 GATSQ8NAP1 163 aa16.59■□□□□ 0.25
PDLIM7-216ENST00000506537 OR2M3Q8NG83 312 aa16.59■□□□□ 0.25
PDLIM7-216ENST00000506537 OR5M9Q8NGP3 310 aa16.59■□□□□ 0.25
PDLIM7-216ENST00000506537 ZFP90Q8TF47 636 aa16.59■□□□□ 0.25
PDLIM7-216ENST00000506537 GTF2H4Q92759 462 aa16.59■□□□□ 0.25
PDLIM7-216ENST00000506537 RAB8BQ92930 207 aa16.59■□□□□ 0.25
PDLIM7-216ENST00000506537 SDF2Q99470 211 aa16.59■□□□□ 0.25
PDLIM7-216ENST00000506537 DSN1Q9H410 356 aa16.59■□□□□ 0.25
PDLIM7-216ENST00000506537 MED11Q9P086 117 aa16.59■□□□□ 0.25
PDLIM7-216ENST00000506537 CCDC167Q9P0B6 97 aa16.59■□□□□ 0.25
PDLIM7-216ENST00000506537 MEMO1Q9Y316 297 aa16.59■□□□□ 0.25
PDLIM7-216ENST00000506537 MED12Q93074 2177 aa16.58■□□□□ 0.25
PDLIM7-216ENST00000506537 IGLV3-32A0A0A0MS00 114 aa16.58■□□□□ 0.24
PDLIM7-216ENST00000506537 PRAMEF27A3QJZ7 478 aa16.58■□□□□ 0.24
PDLIM7-216ENST00000506537 NPIPB9F8W1W9 429 aa16.58■□□□□ 0.24
PDLIM7-216ENST00000506537 BCKDKO14874 412 aa16.58■□□□□ 0.24
PDLIM7-216ENST00000506537 NCF2P19878 526 aaPredicted RBP16.58■□□□□ 0.24
PDLIM7-216ENST00000506537 ATP6V1C1P21283 382 aa16.58■□□□□ 0.24
PDLIM7-216ENST00000506537 SRD5A2P31213 254 aa16.58■□□□□ 0.24
PDLIM7-216ENST00000506537 DCTP40126 519 aa16.58■□□□□ 0.24
PDLIM7-216ENST00000506537 KHKP50053 298 aa16.58■□□□□ 0.24
PDLIM7-216ENST00000506537 RNF144AP50876 292 aaPredicted RBP16.58■□□□□ 0.24
PDLIM7-216ENST00000506537 MVDP53602 400 aa16.58■□□□□ 0.24
PDLIM7-216ENST00000506537 CRYZQ08257 329 aaKnown RBP16.58■□□□□ 0.24
PDLIM7-216ENST00000506537 CD226Q15762 336 aa16.58■□□□□ 0.24
PDLIM7-216ENST00000506537 GXYLT1Q4G148 440 aa16.58■□□□□ 0.24
PDLIM7-216ENST00000506537 AGKQ53H12 422 aa16.58■□□□□ 0.24
PDLIM7-216ENST00000506537 COX20Q5RI15 118 aa16.58■□□□□ 0.24
PDLIM7-216ENST00000506537 DCST1Q5T197 706 aa16.58■□□□□ 0.24
PDLIM7-216ENST00000506537 RPRMLQ8N4K4 120 aa16.58■□□□□ 0.24
PDLIM7-216ENST00000506537 MARVELD2Q8N4S9 558 aa16.58■□□□□ 0.24
PDLIM7-216ENST00000506537 OR4K17Q8NGC6 315 aa16.58■□□□□ 0.24
PDLIM7-216ENST00000506537 PNPT1Q8TCS8 783 aaKnown RBP16.58■□□□□ 0.24
PDLIM7-216ENST00000506537 DUSP19Q8WTR2 217 aa16.58■□□□□ 0.24
PDLIM7-216ENST00000506537 SPDL1Q96EA4 605 aa16.58■□□□□ 0.24
PDLIM7-216ENST00000506537 AURKBQ96GD4 344 aaPredicted RBP16.58■□□□□ 0.24
PDLIM7-216ENST00000506537 ITCHQ96J02 903 aa16.58■□□□□ 0.24
PDLIM7-216ENST00000506537 ZNF317Q96PQ6 595 aaPredicted RBP16.58■□□□□ 0.24
PDLIM7-216ENST00000506537 DMRTA2Q96SC8 542 aa16.58■□□□□ 0.24
PDLIM7-216ENST00000506537 PAIP1Q9H074 479 aaKnown RBP16.58■□□□□ 0.24
PDLIM7-216ENST00000506537 RMND5AQ9H871 391 aa16.58■□□□□ 0.24
PDLIM7-216ENST00000506537 UBQLN4Q9NRR5 601 aa16.58■□□□□ 0.24
PDLIM7-216ENST00000506537 PCDHGB3Q9Y5G1 929 aa16.58■□□□□ 0.24
PDLIM7-216ENST00000506537 PCNX3Q9H6A9 2034 aa16.58■□□□□ 0.24
PDLIM7-216ENST00000506537 NCOA6Q14686 2063 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms