RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 ATP4BP51164 291 aa15.2■□□□□ 0.02
SNCA-209ENST00000506244 POLR2JP52435 117 aaKnown RBP15.2■□□□□ 0.02
SNCA-209ENST00000506244 C17orf67Q0P5P2 114 aa15.2■□□□□ 0.02
SNCA-209ENST00000506244 STX5Q13190 355 aa15.2■□□□□ 0.02
SNCA-209ENST00000506244 SF3B4Q15427 424 aaKnown RBP eCLIP15.2■□□□□ 0.02
SNCA-209ENST00000506244 NHSL2Q5HYW2 709 aa15.2■□□□□ 0.02
SNCA-209ENST00000506244 SAXO2Q658L1 398 aa15.2■□□□□ 0.02
SNCA-209ENST00000506244 C16orf62Q7Z3J2 963 aa15.2■□□□□ 0.02
SNCA-209ENST00000506244 IFNEQ86WN2 208 aa15.2■□□□□ 0.02
SNCA-209ENST00000506244 PM20D2Q8IYS1 436 aa15.2■□□□□ 0.02
SNCA-209ENST00000506244 OR14L1PQ8NHC6 308 aa15.2■□□□□ 0.02
SNCA-209ENST00000506244 NEURL3Q96EH8 262 aa15.2■□□□□ 0.02
SNCA-209ENST00000506244 PHF12Q96QT6 1004 aa15.2■□□□□ 0.02
SNCA-209ENST00000506244 SPRR3Q9UBC9 169 aa15.2■□□□□ 0.02
SNCA-209ENST00000506244 MRPS18CQ9Y3D5 142 aaKnown RBP15.2■□□□□ 0.02
SNCA-209ENST00000506244 SPTAN1Q13813 2472 aaKnown RBP15.19■□□□□ 0.02
SNCA-209ENST00000506244 CCDC154A6NI56 674 aa15.19■□□□□ 0.02
SNCA-209ENST00000506244 ZNHIT1O43257 154 aa15.19■□□□□ 0.02
SNCA-209ENST00000506244 NDUFB5O43674 189 aa15.19■□□□□ 0.02
SNCA-209ENST00000506244 OXSR1O95747 527 aaPredicted RBP15.19■□□□□ 0.02
SNCA-209ENST00000506244 ANGPTL1O95841 491 aa15.19■□□□□ 0.02
SNCA-209ENST00000506244 ACTL6AO96019 429 aa15.19■□□□□ 0.02
SNCA-209ENST00000506244 AGAP20933 346 aa15.19■□□□□ 0.02
SNCA-209ENST00000506244 ENDOUP21128 410 aaKnown RBP15.19■□□□□ 0.02
SNCA-209ENST00000506244 ACVR2AP27037 513 aa15.19■□□□□ 0.02
SNCA-209ENST00000506244 MAGEA8P43361 318 aa15.19■□□□□ 0.02
SNCA-209ENST00000506244 DSCR4P56555 118 aaPredicted RBP15.19■□□□□ 0.02
SNCA-209ENST00000506244 RPS26P62854 115 aaKnown RBP15.19■□□□□ 0.02
SNCA-209ENST00000506244 SQLEQ14534 574 aa15.19■□□□□ 0.02
SNCA-209ENST00000506244 GXYLT1Q4G148 440 aa15.19■□□□□ 0.02
SNCA-209ENST00000506244 TIGD2Q4W5G0 525 aa15.19■□□□□ 0.02
SNCA-209ENST00000506244 CCNJQ5T5M9 372 aa15.19■□□□□ 0.02
SNCA-209ENST00000506244 AAGABQ6PD74 315 aa15.19■□□□□ 0.02
SNCA-209ENST00000506244 GALNT10Q86SR1 603 aa15.19■□□□□ 0.02
SNCA-209ENST00000506244 ZNF808Q8N4W9 903 aaPredicted RBP15.19■□□□□ 0.02
SNCA-209ENST00000506244 FADS6Q8N9I5 356 aa15.19■□□□□ 0.02
SNCA-209ENST00000506244 OR5D16Q8NGK9 328 aa15.19■□□□□ 0.02
SNCA-209ENST00000506244 ITCHQ96J02 903 aa15.19■□□□□ 0.02
SNCA-209ENST00000506244 PSMG3-AS1Q96PY0 264 aa15.19■□□□□ 0.02
SNCA-209ENST00000506244 RABEP2Q9H5N1 569 aa15.19■□□□□ 0.02
SNCA-209ENST00000506244 NPHS2Q9NP85 383 aa15.19■□□□□ 0.02
SNCA-209ENST00000506244 PNPLA3Q9NST1 481 aa15.19■□□□□ 0.02
SNCA-209ENST00000506244 TAS2R10Q9NYW0 307 aa15.19■□□□□ 0.02
SNCA-209ENST00000506244 FLRT3Q9NZU0 649 aa15.19■□□□□ 0.02
SNCA-209ENST00000506244 NCKAP5O14513 1909 aa15.19■□□□□ 0.02
SNCA-209ENST00000506244 NUP214P35658 2090 aaPredicted RBP15.18■□□□□ 0.02
SNCA-209ENST00000506244 SPTBN1Q01082 2364 aaKnown RBP15.18■□□□□ 0.02
SNCA-209ENST00000506244 IGLV3-32A0A0A0MS00 114 aa15.18■□□□□ 0.02
SNCA-209ENST00000506244 A0A1W2PQD3 144 aa15.18■□□□□ 0.02
SNCA-209ENST00000506244 FAM47E-STBD1D6RA91 191 aa15.18■□□□□ 0.02
SNCA-209ENST00000506244 H3BNH8 94 aa15.18■□□□□ 0.02
SNCA-209ENST00000506244 ANP32DO95626 131 aa15.18■□□□□ 0.02
SNCA-209ENST00000506244 KRT75O95678 551 aa15.18■□□□□ 0.02
SNCA-209ENST00000506244 RNF224P0DH78 156 aa15.18■□□□□ 0.02
SNCA-209ENST00000506244 DPP4P27487 766 aa15.18■□□□□ 0.02
SNCA-209ENST00000506244 HPCAP84074 193 aa15.18■□□□□ 0.02
SNCA-209ENST00000506244 CRYZQ08257 329 aaKnown RBP15.18■□□□□ 0.02
SNCA-209ENST00000506244 RCAN2Q14206 197 aa15.18■□□□□ 0.02
SNCA-209ENST00000506244 FLYWCH1Q4VC44 716 aa15.18■□□□□ 0.02
SNCA-209ENST00000506244 EIPR1Q53HC9 387 aa15.18■□□□□ 0.02
SNCA-209ENST00000506244 WIPI1Q5MNZ9 446 aaPredicted RBP15.18■□□□□ 0.02
SNCA-209ENST00000506244 OR5M10Q6IEU7 315 aa15.18■□□□□ 0.02
SNCA-209ENST00000506244 ZNF585AQ6P3V2 769 aa15.18■□□□□ 0.02
SNCA-209ENST00000506244 XKRXQ6PP77 449 aa15.18■□□□□ 0.02
SNCA-209ENST00000506244 ENPP6Q6UWR7 440 aa15.18■□□□□ 0.02
SNCA-209ENST00000506244 ZNF621Q6ZSS3 439 aa15.18■□□□□ 0.02
SNCA-209ENST00000506244 MARCH3Q86UD3 253 aa15.18■□□□□ 0.02
SNCA-209ENST00000506244 CLEC4FQ8N1N0 589 aa15.18■□□□□ 0.02
SNCA-209ENST00000506244 CHDHQ8NE62 594 aaPredicted RBP15.18■□□□□ 0.02
SNCA-209ENST00000506244 OR2M3Q8NG83 312 aa15.18■□□□□ 0.02
SNCA-209ENST00000506244 OR5M9Q8NGP3 310 aa15.18■□□□□ 0.02
SNCA-209ENST00000506244 OR9I1Q8NGQ6 314 aa15.18■□□□□ 0.02
SNCA-209ENST00000506244 OIT3Q8WWZ8 545 aa15.18■□□□□ 0.02
SNCA-209ENST00000506244 DMRTA2Q96SC8 542 aa15.18■□□□□ 0.02
SNCA-209ENST00000506244 OR51I1Q9H343 314 aa15.18■□□□□ 0.02
SNCA-209ENST00000506244 POLE3Q9NRF9 147 aa15.18■□□□□ 0.02
SNCA-209ENST00000506244 MRGBPQ9NV56 204 aa15.18■□□□□ 0.02
SNCA-209ENST00000506244 FBXL2Q9UKC9 423 aa15.18■□□□□ 0.02
SNCA-209ENST00000506244 A0A0G2JND7 137 aa15.17■□□□□ 0.02
SNCA-209ENST00000506244 MSX1P28360 303 aa15.17■□□□□ 0.02
SNCA-209ENST00000506244 DCTP40126 519 aa15.17■□□□□ 0.02
SNCA-209ENST00000506244 ZNF630Q2M218 657 aaPredicted RBP15.17■□□□□ 0.02
SNCA-209ENST00000506244 EMC4Q5J8M3 183 aa15.17■□□□□ 0.02
SNCA-209ENST00000506244 C6orf10Q5SRN2 563 aa15.17■□□□□ 0.02
SNCA-209ENST00000506244 VASNQ6EMK4 673 aa15.17■□□□□ 0.02
SNCA-209ENST00000506244 TNFAIP8L2Q6P589 184 aaPredicted RBP15.17■□□□□ 0.02
SNCA-209ENST00000506244 DNAJC14Q6Y2X3 702 aaPredicted RBP15.17■□□□□ 0.02
SNCA-209ENST00000506244 B3GNT6Q6ZMB0 384 aa15.17■□□□□ 0.02
SNCA-209ENST00000506244 C3P1Q6ZMU1 363 aa15.17■□□□□ 0.02
SNCA-209ENST00000506244 MAMDC2Q7Z304 686 aaPredicted RBP15.17■□□□□ 0.02
SNCA-209ENST00000506244 MTERF4Q7Z6M4 381 aaKnown RBP15.17■□□□□ 0.02
SNCA-209ENST00000506244 ZAR1Q86SH2 424 aa15.17■□□□□ 0.02
SNCA-209ENST00000506244 YRDCQ86U90 279 aaKnown RBP15.17■□□□□ 0.02
SNCA-209ENST00000506244 OR4C3Q8NH37 302 aa15.17■□□□□ 0.02
SNCA-209ENST00000506244 DUSP19Q8WTR2 217 aa15.17■□□□□ 0.02
SNCA-209ENST00000506244 ABTB1Q969K4 478 aaPredicted RBP15.17■□□□□ 0.02
SNCA-209ENST00000506244 SFXN2Q96NB2 322 aa15.17■□□□□ 0.02
SNCA-209ENST00000506244 INPP5KQ9BT40 448 aa15.17■□□□□ 0.02
SNCA-209ENST00000506244 NMUR2Q9GZQ4 415 aa15.17■□□□□ 0.02
SNCA-209ENST00000506244 PRDM14Q9GZV8 571 aa15.17■□□□□ 0.02
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