RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 DCAKDQ8WVC6 231 aa18.91■□□□□ 0.62
SQSTM1-210ENST00000506042 L3HYPDHQ96EM0 354 aa18.91■□□□□ 0.62
SQSTM1-210ENST00000506042 APIPQ96GX9 242 aa18.91■□□□□ 0.62
SQSTM1-210ENST00000506042 USB1Q9BQ65 265 aaKnown RBP18.91■□□□□ 0.62
SQSTM1-210ENST00000506042 HDHD5Q9BXW7 423 aa18.91■□□□□ 0.62
SQSTM1-210ENST00000506042 MYNNQ9NPC7 610 aa18.91■□□□□ 0.62
SQSTM1-210ENST00000506042 PLSCR4Q9NRQ2 329 aa18.91■□□□□ 0.62
SQSTM1-210ENST00000506042 NDUFB5O43674 189 aa18.9■□□□□ 0.62
SQSTM1-210ENST00000506042 UTS2O95399 124 aa18.9■□□□□ 0.62
SQSTM1-210ENST00000506042 HSPA4LO95757 839 aa18.9■□□□□ 0.62
SQSTM1-210ENST00000506042 CGAP01215 116 aa18.9■□□□□ 0.62
SQSTM1-210ENST00000506042 TP53P04637 393 aaPredicted RBP18.9■□□□□ 0.62
SQSTM1-210ENST00000506042 LCN1P31025 176 aa18.9■□□□□ 0.62
SQSTM1-210ENST00000506042 PRKAA2P54646 552 aa18.9■□□□□ 0.62
SQSTM1-210ENST00000506042 RAE1P78406 368 aaKnown RBP18.9■□□□□ 0.62
SQSTM1-210ENST00000506042 PRR5P85299 388 aa18.9■□□□□ 0.62
SQSTM1-210ENST00000506042 GLE1Q53GS7 698 aaKnown RBP18.9■□□□□ 0.62
SQSTM1-210ENST00000506042 UNC50Q53HI1 259 aa18.9■□□□□ 0.62
SQSTM1-210ENST00000506042 CFAP157Q5JU67 520 aa18.9■□□□□ 0.62
SQSTM1-210ENST00000506042 TCHHL1Q5QJ38 904 aaPredicted RBP18.9■□□□□ 0.62
SQSTM1-210ENST00000506042 TIFABQ6ZNK6 161 aa18.9■□□□□ 0.62
SQSTM1-210ENST00000506042 STEAP2Q8NFT2 490 aa18.9■□□□□ 0.62
SQSTM1-210ENST00000506042 GPR151Q8TDV0 419 aa18.9■□□□□ 0.62
SQSTM1-210ENST00000506042 TMEM237Q96Q45 408 aa18.9■□□□□ 0.62
SQSTM1-210ENST00000506042 LMF2Q9BU23 707 aaKnown RBP18.9■□□□□ 0.62
SQSTM1-210ENST00000506042 MID1IP1Q9NPA3 183 aa18.9■□□□□ 0.62
SQSTM1-210ENST00000506042 ZNF225Q9UK10 706 aa18.9■□□□□ 0.62
SQSTM1-210ENST00000506042 GPR52Q9Y2T5 361 aa18.9■□□□□ 0.62
SQSTM1-210ENST00000506042 IGLV3-32A0A0A0MS00 114 aa18.89■□□□□ 0.61
SQSTM1-210ENST00000506042 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.89■□□□□ 0.61
SQSTM1-210ENST00000506042 TUBBP07437 444 aa18.89■□□□□ 0.61
SQSTM1-210ENST00000506042 SUCLG1P53597 346 aaKnown RBP18.89■□□□□ 0.61
SQSTM1-210ENST00000506042 ATP5J2P56134 94 aa18.89■□□□□ 0.61
SQSTM1-210ENST00000506042 CLDN20P56880 219 aa18.89■□□□□ 0.61
SQSTM1-210ENST00000506042 SH2D5Q6ZV89 423 aa18.89■□□□□ 0.61
SQSTM1-210ENST00000506042 ESPNLQ6ZVH7 1005 aa18.89■□□□□ 0.61
SQSTM1-210ENST00000506042 MARCH3Q86UD3 253 aa18.89■□□□□ 0.61
SQSTM1-210ENST00000506042 ZNF611Q8N823 705 aa18.89■□□□□ 0.61
SQSTM1-210ENST00000506042 CDRT4Q8N9R6 151 aa18.89■□□□□ 0.61
SQSTM1-210ENST00000506042 ELP4Q96EB1 424 aa18.89■□□□□ 0.61
SQSTM1-210ENST00000506042 DCDC2Q9UHG0 476 aa18.89■□□□□ 0.61
SQSTM1-210ENST00000506042 VDAC3Q9Y277 283 aa18.89■□□□□ 0.61
SQSTM1-210ENST00000506042 DSCAMO60469 2012 aa18.88■□□□□ 0.61
SQSTM1-210ENST00000506042 MED12Q93074 2177 aa18.88■□□□□ 0.61
SQSTM1-210ENST00000506042 GJE1A6NN92 205 aa18.88■□□□□ 0.61
SQSTM1-210ENST00000506042 UPK1AO00322 258 aa18.88■□□□□ 0.61
SQSTM1-210ENST00000506042 DLX3O60479 287 aa18.88■□□□□ 0.61
SQSTM1-210ENST00000506042 SS18L1O75177 396 aaPredicted RBP18.88■□□□□ 0.61
SQSTM1-210ENST00000506042 RSL1D1O76021 490 aaKnown RBP18.88■□□□□ 0.61
SQSTM1-210ENST00000506042 URI1O94763 535 aaPredicted RBP18.88■□□□□ 0.61
SQSTM1-210ENST00000506042 PRPS2P11908 318 aa18.88■□□□□ 0.61
SQSTM1-210ENST00000506042 PAX1P15863 534 aa18.88■□□□□ 0.61
SQSTM1-210ENST00000506042 CHN1P15882 459 aa18.88■□□□□ 0.61
SQSTM1-210ENST00000506042 IL11P20809 199 aa18.88■□□□□ 0.61
SQSTM1-210ENST00000506042 CCKARP32238 428 aa18.88■□□□□ 0.61
SQSTM1-210ENST00000506042 GABRA3P34903 492 aa18.88■□□□□ 0.61
SQSTM1-210ENST00000506042 RPS4XP62701 263 aaKnown RBP18.88■□□□□ 0.61
SQSTM1-210ENST00000506042 TMEM201Q5SNT2 666 aa18.88■□□□□ 0.61
SQSTM1-210ENST00000506042 ANKRD34AQ69YU3 496 aa18.88■□□□□ 0.61
SQSTM1-210ENST00000506042 SZRD1Q7Z422 152 aa18.88■□□□□ 0.61
SQSTM1-210ENST00000506042 CCNYL1Q8N7R7 359 aa18.88■□□□□ 0.61
SQSTM1-210ENST00000506042 OR6Y1Q8NGX8 325 aa18.88■□□□□ 0.61
SQSTM1-210ENST00000506042 ACTRT2Q8TDY3 377 aa18.88■□□□□ 0.61
SQSTM1-210ENST00000506042 GTPBP3Q969Y2 492 aaKnown RBP18.88■□□□□ 0.61
SQSTM1-210ENST00000506042 ZBED6CLQ96FA7 236 aaPredicted RBP18.88■□□□□ 0.61
SQSTM1-210ENST00000506042 AMDHD1Q96NU7 426 aa18.88■□□□□ 0.61
SQSTM1-210ENST00000506042 TMEM216Q9P0N5 145 aa18.88■□□□□ 0.61
SQSTM1-210ENST00000506042 SCDO00767 359 aa18.87■□□□□ 0.61
SQSTM1-210ENST00000506042 HS3ST1O14792 307 aa18.87■□□□□ 0.61
SQSTM1-210ENST00000506042 PDPK1O15530 556 aa18.87■□□□□ 0.61
SQSTM1-210ENST00000506042 SIAH2O43255 324 aa18.87■□□□□ 0.61
SQSTM1-210ENST00000506042 NGFRP08138 427 aa18.87■□□□□ 0.61
SQSTM1-210ENST00000506042 ABHD2P08910 425 aa18.87■□□□□ 0.61
SQSTM1-210ENST00000506042 MYL2P10916 166 aa18.87■□□□□ 0.61
SQSTM1-210ENST00000506042 EIF1P41567 113 aaKnown RBP18.87■□□□□ 0.61
SQSTM1-210ENST00000506042 SERPINB4P48594 390 aa18.87■□□□□ 0.61
SQSTM1-210ENST00000506042 RAC1P63000 192 aa18.87■□□□□ 0.61
SQSTM1-210ENST00000506042 SLC29A2Q14542 456 aa18.87■□□□□ 0.61
SQSTM1-210ENST00000506042 SSX8Q7RTT4 187 aa18.87■□□□□ 0.61
SQSTM1-210ENST00000506042 WFDC8Q8IUA0 241 aa18.87■□□□□ 0.61
SQSTM1-210ENST00000506042 OR5M1Q8NGP8 315 aa18.87■□□□□ 0.61
SQSTM1-210ENST00000506042 OR10D3Q8NH80 312 aa18.87■□□□□ 0.61
SQSTM1-210ENST00000506042 ARL8AQ96BM9 186 aa18.87■□□□□ 0.61
SQSTM1-210ENST00000506042 ACTR6Q9GZN1 396 aa18.87■□□□□ 0.61
SQSTM1-210ENST00000506042 GLIPR2Q9H4G4 154 aa18.87■□□□□ 0.61
SQSTM1-210ENST00000506042 ESRP2Q9H6T0 727 aaKnown RBP18.87■□□□□ 0.61
SQSTM1-210ENST00000506042 TIMM22Q9Y584 194 aa18.87■□□□□ 0.61
SQSTM1-210ENST00000506042 C7orf72A4D263 438 aa18.86■□□□□ 0.61
SQSTM1-210ENST00000506042 TRIM64A6NGJ6 449 aa18.86■□□□□ 0.61
SQSTM1-210ENST00000506042 TRIM64BA6NI03 449 aa18.86■□□□□ 0.61
SQSTM1-210ENST00000506042 SOX30O94993 753 aa18.86■□□□□ 0.61
SQSTM1-210ENST00000506042 CHEK2O96017 543 aa18.86■□□□□ 0.61
SQSTM1-210ENST00000506042 SBK3P0C264 359 aa18.86■□□□□ 0.61
SQSTM1-210ENST00000506042 RNPS1Q15287 305 aaKnown RBP18.86■□□□□ 0.61
SQSTM1-210ENST00000506042 GUSBP1Q15486 140 aa18.86■□□□□ 0.61
SQSTM1-210ENST00000506042 HBMQ6B0K9 141 aa18.86■□□□□ 0.61
SQSTM1-210ENST00000506042 FAM71E1Q6IPT2 247 aa18.86■□□□□ 0.61
SQSTM1-210ENST00000506042 TRMT10CQ7L0Y3 403 aaKnown RBP18.86■□□□□ 0.61
SQSTM1-210ENST00000506042 CIARTQ8N365 385 aaPredicted RBP18.86■□□□□ 0.61
SQSTM1-210ENST00000506042 GTPBP8Q8N3Z3 284 aaPredicted RBP18.86■□□□□ 0.61
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