RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 POLEQ07864 2286 aa10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 KIAA1549Q9HCM3 1950 aa10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 PINLYPA6NC86 204 aa10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 EVPLLA8MZ36 301 aa10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 NPIPB9F8W1W9 429 aa10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 G3V3Y1 287 aa10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 MRASO14807 208 aa10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 STX11O75558 287 aa10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 GLSO94925 669 aaPredicted RBP10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 ETFAP13804 333 aa10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 ATP6V1C1P21283 382 aa10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 PRDX6P30041 224 aa10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 EVI2BP34910 448 aa10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 CRATP43155 626 aa10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 RFX3P48380 749 aa10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 MMP16P51512 607 aa10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 GAS1P54826 345 aa10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 MLLT10P55197 1068 aa10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 DSTNP60981 165 aa10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 KCNJ2P63252 427 aa10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 PMP22Q01453 160 aa10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 FUT5Q11128 374 aa10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 HYAL4Q2M3T9 481 aa10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 GRAMD1BQ3KR37 738 aa10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 PRR30Q53SZ7 412 aaPredicted RBP10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 FAM91A1Q658Y4 838 aa10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 REP15Q6BDI9 236 aa10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 MYO7BQ6PIF6 2116 aa10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 POU5F2Q8N7G0 328 aa10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 OR4C3Q8NH37 302 aa10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 CPT1CQ8TCG5 803 aa10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 BCAS4Q8TDM0 211 aa10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 FAR1Q8WVX9 515 aa10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 ROPN1LQ96C74 230 aa10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 CMTM5Q96DZ9 223 aa10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 ZNF597Q96LX8 424 aa10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 TRNT1Q96Q11 434 aaKnown RBP10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 CPPED1Q9BRF8 314 aaPredicted RBP10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 ZNF350Q9GZX5 532 aa10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 SAP130Q9H0E3 1048 aa10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 IL1RL2Q9HB29 575 aa10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 HHATLQ9HCP6 504 aa10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 ZFP64Q9NPA5 681 aa10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 ASF1BQ9NVP2 202 aa10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 GID8Q9NWU2 228 aa10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 TUBA8Q9NY65 449 aaPredicted RBP10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 KLRF1Q9NZS2 232 aa10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 FLRT3Q9NZU0 649 aa10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 BOKQ9UMX3 212 aaPredicted RBP10.89□□□□□ -0.67
PDLIM5-208ENST00000504489 PRAMEF27A3QJZ7 478 aa10.88□□□□□ -0.67
PDLIM5-208ENST00000504489 ALG1L2C9J202 215 aa10.88□□□□□ -0.67
PDLIM5-208ENST00000504489 NDUFAB1O14561 156 aa10.88□□□□□ -0.67
PDLIM5-208ENST00000504489 ADAM10O14672 748 aa10.88□□□□□ -0.67
PDLIM5-208ENST00000504489 TNFRSF21O75509 655 aa10.88□□□□□ -0.67
PDLIM5-208ENST00000504489 OXSR1O95747 527 aaPredicted RBP10.88□□□□□ -0.67
PDLIM5-208ENST00000504489 NR2F1P10589 423 aa10.88□□□□□ -0.67
PDLIM5-208ENST00000504489 ELAVL4P26378 380 aaKnown RBP10.88□□□□□ -0.67
PDLIM5-208ENST00000504489 CLK3P49761 638 aaKnown RBP10.88□□□□□ -0.67
PDLIM5-208ENST00000504489 ATP12AP54707 1039 aa10.88□□□□□ -0.67
PDLIM5-208ENST00000504489 PPIAP62937 165 aaKnown RBP10.88□□□□□ -0.67
PDLIM5-208ENST00000504489 GUCA2AQ02747 115 aa10.88□□□□□ -0.67
PDLIM5-208ENST00000504489 RNFT1Q5M7Z0 435 aa10.88□□□□□ -0.67
PDLIM5-208ENST00000504489 FNDC7Q5VTL7 733 aa10.88□□□□□ -0.67
PDLIM5-208ENST00000504489 NANOGP8Q6NSW7 305 aa10.88□□□□□ -0.67
PDLIM5-208ENST00000504489 BNC2Q6ZN30 1099 aaPredicted RBP10.88□□□□□ -0.67
PDLIM5-208ENST00000504489 LRRC74BQ6ZQY2 392 aa10.88□□□□□ -0.67
PDLIM5-208ENST00000504489 MTERF4Q7Z6M4 381 aaKnown RBP10.88□□□□□ -0.67
PDLIM5-208ENST00000504489 GALNT10Q86SR1 603 aa10.88□□□□□ -0.67
PDLIM5-208ENST00000504489 OIT3Q8WWZ8 545 aa10.88□□□□□ -0.67
PDLIM5-208ENST00000504489 NR4A3Q92570 626 aa10.88□□□□□ -0.67
PDLIM5-208ENST00000504489 PMM1Q92871 262 aa10.88□□□□□ -0.67
PDLIM5-208ENST00000504489 LRRC58Q96CX6 371 aa10.88□□□□□ -0.67
PDLIM5-208ENST00000504489 RCN3Q96D15 328 aa10.88□□□□□ -0.67
PDLIM5-208ENST00000504489 SH3GL1Q99961 368 aa10.88□□□□□ -0.67
PDLIM5-208ENST00000504489 TTTY12Q9BZ98 90 aa10.88□□□□□ -0.67
PDLIM5-208ENST00000504489 TBL1XR1Q9BZK7 514 aa10.88□□□□□ -0.67
PDLIM5-208ENST00000504489 IKZF5Q9H5V7 419 aa10.88□□□□□ -0.67
PDLIM5-208ENST00000504489 NANOGQ9H9S0 305 aa10.88□□□□□ -0.67
PDLIM5-208ENST00000504489 EFCAB1Q9HAE3 211 aa10.88□□□□□ -0.67
PDLIM5-208ENST00000504489 GALNT9Q9HCQ5 603 aa10.88□□□□□ -0.67
PDLIM5-208ENST00000504489 SDHAF3Q9NRP4 125 aa10.88□□□□□ -0.67
PDLIM5-208ENST00000504489 P2RX2Q9UBL9 471 aa10.88□□□□□ -0.67
PDLIM5-208ENST00000504489 WDR45Q9Y484 360 aa10.88□□□□□ -0.67
PDLIM5-208ENST00000504489 WIF1Q9Y5W5 379 aa10.88□□□□□ -0.67
PDLIM5-208ENST00000504489 HIVEP3Q5T1R4 2406 aa10.88□□□□□ -0.67
PDLIM5-208ENST00000504489 SMG1Q96Q15 3661 aaKnown RBP10.87□□□□□ -0.67
PDLIM5-208ENST00000504489 A0A1W2PQD3 144 aa10.87□□□□□ -0.67
PDLIM5-208ENST00000504489 LRRC3CA6NJW4 275 aa10.87□□□□□ -0.67
PDLIM5-208ENST00000504489 ACOT7O00154 380 aa10.87□□□□□ -0.67
PDLIM5-208ENST00000504489 FXYD1O00168 92 aa10.87□□□□□ -0.67
PDLIM5-208ENST00000504489 FCMRO60667 390 aa10.87□□□□□ -0.67
PDLIM5-208ENST00000504489 ZIC2O95409 532 aaPredicted RBP10.87□□□□□ -0.67
PDLIM5-208ENST00000504489 TFPTP0C1Z6 253 aa10.87□□□□□ -0.67
PDLIM5-208ENST00000504489 ZNF24P17028 368 aa10.87□□□□□ -0.67
PDLIM5-208ENST00000504489 DCTP40126 519 aa10.87□□□□□ -0.67
PDLIM5-208ENST00000504489 MASP1P48740 699 aa10.87□□□□□ -0.67
PDLIM5-208ENST00000504489 ALDH6A1Q02252 535 aaKnown RBP10.87□□□□□ -0.67
PDLIM5-208ENST00000504489 PLGLB1Q02325 96 aa10.87□□□□□ -0.67
PDLIM5-208ENST00000504489 GNA13Q14344 377 aa10.87□□□□□ -0.67
PDLIM5-208ENST00000504489 CAPRIN1Q14444 709 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms