RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 GPR142Q7Z601 462 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 FAM58AQ8N1B3 248 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 C1orf52Q8N6N3 182 aaKnown RBP3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 NOA1Q8NC60 698 aaKnown RBP3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 OR4K1Q8NGD4 311 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 OR4K14Q8NGD5 310 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 SAP25Q8TEE9 199 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 PIGCQ92535 297 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 SUSD6Q92537 303 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 TMEM18Q96B42 140 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 SGK494Q96LW2 274 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 CENPKQ9BS16 269 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 MMTAG2Q9BU76 263 aaKnown RBP3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 FUNDC2Q9BWH2 189 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 STRADBQ9C0K7 418 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 IL22Q9GZX6 179 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 CPVLQ9H3G5 476 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 SLA2Q9H6Q3 261 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 SMYD3Q9H7B4 428 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 Q9H8V8 135 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 SLC38A10Q9HBR0 1119 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 PNO1Q9NRX1 252 aaKnown RBP3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 PHPT1Q9NRX4 125 aaPredicted RBP3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 MAN2C1Q9NTJ4 1040 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 PIPOXQ9P0Z9 390 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 B3GAT1Q9P2W7 334 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 PISDQ9UG56 409 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 FBXL2Q9UKC9 423 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 STAP1Q9ULZ2 295 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 RPH3ALQ9UNE2 315 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 SATB2Q9UPW6 733 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 GAB2Q9UQC2 676 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 WDR45Q9Y484 360 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 RIPK3Q9Y572 518 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 KLF2Q9Y5W3 355 aaPredicted RBP3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 ZNFX1Q9P2E3 1918 aaKnown RBP3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 BAHCC1Q9P281 2608 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 ZNF236Q9UL36 1845 aa3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 PPIAL4CA0A0B4J2A2 164 aa3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 A0A1W2PPV4 95 aa3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 SMCO3A2RU48 225 aa3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 RNF222A6NCQ9 220 aa3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 IQCF5A8MTL0 148 aa3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 A8MU76 341 aa3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 ZSCAN12O43309 604 aa3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 TIMM8AO60220 97 aaPredicted RBP3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 TPST2O60704 377 aa3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 KLHL2O95198 593 aa3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 PAPSS2O95340 614 aaPredicted RBP3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 ECDO95905 644 aaPredicted RBP3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 GOT2P00505 430 aaKnown RBP3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 PGK1P00558 417 aa3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 EPOP01588 193 aa3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 CRYGBP07316 175 aa3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 CLTAP09496 248 aa3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 ANXA4P09525 319 aaPredicted RBP3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 PPIAL4GP0DN37 164 aa3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 CALM1P0DP23 149 aa3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 CALM2P0DP24 149 aa3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 CALM3P0DP25 149 aa3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 POU2F1P14859 743 aa3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 CPN1P15169 458 aa3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 PCMT1P22061 227 aa3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 HOXD3P31249 432 aaPredicted RBP3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 OTX1P32242 354 aaPredicted RBP3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 RORAP35398 523 aa3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 CCT3P49368 545 aaKnown RBP3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 PNRC1Q12796 327 aaPredicted RBP3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 EXOSC2Q13868 293 aaKnown RBP3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 GRB14Q14449 540 aa3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 GANABQ14697 944 aaKnown RBP3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 SGSM1Q2NKQ1 1148 aa3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 TMEM44Q2T9K0 475 aa3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 ITPRIPL2Q3MIP1 535 aa3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 TEX44Q53QW1 395 aa3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 GRTP1Q5TC63 336 aa3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 SLC25A25Q6KCM7 469 aa3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 CAPN13Q6MZZ7 669 aaPredicted RBP3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 TMEM107Q6UX40 140 aa3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 NLRP9Q7RTR0 991 aa3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 GOLGA7Q7Z5G4 137 aa3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 PATL1Q86TB9 770 aaKnown RBP3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 PYROXD2Q8N2H3 581 aa3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 PCDH20Q8N6Y1 951 aaKnown RBP3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 TMEM99Q8N816 258 aa3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 RNF149Q8NC42 400 aa3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 SMRP1Q8NCR6 262 aa3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 DDHD1Q8NEL9 900 aa3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 OR6M1Q8NGM8 313 aa3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 ANGPTL6Q8NI99 470 aa3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 ZNF596Q8TC21 504 aa3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 NUDCD2Q8WVJ2 157 aa3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 SEPT8Q92599 483 aa3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 RAB1CQ92928 201 aa3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 TSACCQ96A04 125 aaPredicted RBP3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 ZNF707Q96C28 371 aaPredicted RBP3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 TGS1Q96RS0 853 aaKnown RBP3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 CCT8L2Q96SF2 557 aa3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 KRT12Q99456 494 aa3.82□□□□□ -1.8
PDLIM1P4-201ENST00000504327 UBAC1Q9BSL1 405 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms