RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 NPIPA5E9PKD4 350 aa9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 HMGN4O00479 90 aa9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 KIAA0513O60268 411 aa9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 DNAJA2O60884 412 aa9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 NME6O75414 186 aaPredicted RBP9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 UNC5CO95185 931 aa9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 UTS2O95399 124 aa9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 CPSF4O95639 269 aaKnown RBP9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 OXSR1O95747 527 aaPredicted RBP9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 NCF2P19878 526 aaPredicted RBP9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 ATP6V1C1P21283 382 aa9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 GNLYP22749 145 aa9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 PTGER4P35408 488 aa9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 CHI3L1P36222 383 aaPredicted RBP9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 CDKN2CP42773 168 aa9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 CA7P43166 264 aa9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 ST13P50502 369 aaKnown RBP9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 ATP12AP54707 1039 aa9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 DSCR4P56555 118 aaPredicted RBP9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 NME5P56597 212 aa9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 GNA13Q14344 377 aa9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 ZSWIM7Q19AV6 140 aa9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 AGKQ53H12 422 aa9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 COLEC12Q5KU26 742 aa9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 BICRALQ6AI39 1079 aa9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 LRRC74BQ6ZQY2 392 aa9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 ZNF621Q6ZSS3 439 aa9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 CMIPQ8IY22 773 aa9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 FAM26EQ8N5C1 309 aa9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 OR5M3Q8NGP4 307 aa9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 OR4C3Q8NH37 302 aa9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 PHF10Q8WUB8 498 aaKnown RBP9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 CDS1Q92903 461 aa9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 VPS33AQ96AX1 596 aa9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 SARAFQ96BY9 339 aa9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 INPP5KQ9BT40 448 aa9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 TBL1XR1Q9BZK7 514 aa9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 OR51I1Q9H343 314 aa9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 PTGES2Q9H7Z7 377 aa9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 GALNT9Q9HCQ5 603 aa9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 SAR1AQ9NR31 198 aa9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 CALML5Q9NZT1 146 aa9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 SUCOQ9UBS9 1254 aaKnown RBP9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 NPIPA1Q9UND3 350 aa9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 NDUFAF1Q9Y375 327 aa9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 PCDHB14Q9Y5E9 798 aa9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 HIVEP3Q5T1R4 2406 aa9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 DSPPQ9NZW4 1301 aa9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 NINQ8N4C6 2090 aa9.78□□□□□ -0.84
UBE2D3-212ENST00000502563 A0A087WZY1 265 aa9.77□□□□□ -0.85
UBE2D3-212ENST00000502563 TRGV5A0A0B4J1U4 118 aa9.77□□□□□ -0.85
UBE2D3-212ENST00000502563 GMNCA6NCL1 334 aa9.77□□□□□ -0.85
UBE2D3-212ENST00000502563 H3BNH8 94 aa9.77□□□□□ -0.85
UBE2D3-212ENST00000502563 ETV2O00321 342 aaPredicted RBP9.77□□□□□ -0.85
UBE2D3-212ENST00000502563 SCDO00767 359 aa9.77□□□□□ -0.85
UBE2D3-212ENST00000502563 PRRG2O14669 202 aa9.77□□□□□ -0.85
UBE2D3-212ENST00000502563 SNX3O60493 162 aa9.77□□□□□ -0.85
UBE2D3-212ENST00000502563 CCDC22O60826 627 aa9.77□□□□□ -0.85
UBE2D3-212ENST00000502563 ANP32DO95626 131 aa9.77□□□□□ -0.85
UBE2D3-212ENST00000502563 ANGPTL1O95841 491 aa9.77□□□□□ -0.85
UBE2D3-212ENST00000502563 ACTL6AO96019 429 aa9.77□□□□□ -0.85
UBE2D3-212ENST00000502563 SNRPB2P08579 225 aaKnown RBP9.77□□□□□ -0.85
UBE2D3-212ENST00000502563 RFPL3SP0C7P2 107 aa9.77□□□□□ -0.85
UBE2D3-212ENST00000502563 HPGDP15428 266 aa9.77□□□□□ -0.85
UBE2D3-212ENST00000502563 GPX2P18283 190 aa9.77□□□□□ -0.85
UBE2D3-212ENST00000502563 AGAP20933 346 aa9.77□□□□□ -0.85
UBE2D3-212ENST00000502563 CHMP24386 653 aa9.77□□□□□ -0.85
UBE2D3-212ENST00000502563 GDF1P27539 372 aa9.77□□□□□ -0.85
UBE2D3-212ENST00000502563 PTGS2P35354 604 aa9.77□□□□□ -0.85
UBE2D3-212ENST00000502563 DCTP40126 519 aa9.77□□□□□ -0.85
UBE2D3-212ENST00000502563 UQCRFS1P47985 274 aa9.77□□□□□ -0.85
UBE2D3-212ENST00000502563 CASP6P55212 293 aa9.77□□□□□ -0.85
UBE2D3-212ENST00000502563 DLX5P56178 289 aa9.77□□□□□ -0.85
UBE2D3-212ENST00000502563 MRPL49Q13405 166 aaKnown RBP9.77□□□□□ -0.85
UBE2D3-212ENST00000502563 SF3B4Q15427 424 aaKnown RBP eCLIP9.77□□□□□ -0.853e-70■■■■■ 60.5
UBE2D3-212ENST00000502563 RGNQ15493 299 aa9.77□□□□□ -0.85
UBE2D3-212ENST00000502563 BCL2A1Q16548 175 aa9.77□□□□□ -0.85
UBE2D3-212ENST00000502563 ZNF630Q2M218 657 aaPredicted RBP9.77□□□□□ -0.85
UBE2D3-212ENST00000502563 GRAMD1BQ3KR37 738 aa9.77□□□□□ -0.85
UBE2D3-212ENST00000502563 FLYWCH1Q4VC44 716 aa9.77□□□□□ -0.85
UBE2D3-212ENST00000502563 DESI1Q6ICB0 168 aa9.77□□□□□ -0.85
UBE2D3-212ENST00000502563 FIGNL1Q6PIW4 674 aa9.77□□□□□ -0.85
UBE2D3-212ENST00000502563 ANGPTL8Q6UXH0 198 aa9.77□□□□□ -0.85
UBE2D3-212ENST00000502563 DLEU7Q6UYE1 221 aa9.77□□□□□ -0.85
UBE2D3-212ENST00000502563 WDR53Q7Z5U6 358 aaPredicted RBP9.77□□□□□ -0.85
UBE2D3-212ENST00000502563 PM20D2Q8IYS1 436 aa9.77□□□□□ -0.85
UBE2D3-212ENST00000502563 FAM71CQ8NEG0 241 aa9.77□□□□□ -0.85
UBE2D3-212ENST00000502563 OR5D16Q8NGK9 328 aa9.77□□□□□ -0.85
UBE2D3-212ENST00000502563 FAM57AQ8TBR7 257 aa9.77□□□□□ -0.85
UBE2D3-212ENST00000502563 GNRHR2Q96P88 292 aa9.77□□□□□ -0.85
UBE2D3-212ENST00000502563 PRDM14Q9GZV8 571 aa9.77□□□□□ -0.85
UBE2D3-212ENST00000502563 SLC6A13Q9NSD5 602 aa9.77□□□□□ -0.85
UBE2D3-212ENST00000502563 PPP4R1LQ9P1A2 415 aa9.77□□□□□ -0.85
UBE2D3-212ENST00000502563 P2RX2Q9UBL9 471 aa9.77□□□□□ -0.85
UBE2D3-212ENST00000502563 SLC5A6Q9Y289 635 aa9.77□□□□□ -0.85
UBE2D3-212ENST00000502563 DTNAQ9Y4J8 743 aa9.77□□□□□ -0.85
UBE2D3-212ENST00000502563 DNAJC13O75165 2243 aa9.76□□□□□ -0.85
UBE2D3-212ENST00000502563 FIGNL2A6NMB9 653 aa9.76□□□□□ -0.85
UBE2D3-212ENST00000502563 C9JVG2 144 aa9.76□□□□□ -0.85
UBE2D3-212ENST00000502563 E9PLN8 166 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms