RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 PTCHD1Q96NR3 888 aa16.9■□□□□ 0.3
LINC00535-201ENST00000501400 PELOQ9BRX2 385 aaKnown RBP16.9■□□□□ 0.3
LINC00535-201ENST00000501400 LHPPQ9H008 270 aa16.9■□□□□ 0.3
LINC00535-201ENST00000501400 POLR2J3Q9H1A7 115 aaKnown RBP16.9■□□□□ 0.3
LINC00535-201ENST00000501400 OR10A5Q9H207 317 aa16.9■□□□□ 0.3
LINC00535-201ENST00000501400 C11orf16Q9NQ32 467 aa16.9■□□□□ 0.3
LINC00535-201ENST00000501400 SCN3BQ9NY72 215 aa16.9■□□□□ 0.3
LINC00535-201ENST00000501400 PCDHGB1Q9Y5G3 927 aa16.9■□□□□ 0.3
LINC00535-201ENST00000501400 PCDHGA10Q9Y5H3 936 aa16.9■□□□□ 0.3
LINC00535-201ENST00000501400 COMMD3-BMI1R4GMX3 469 aa16.9■□□□□ 0.3
LINC00535-201ENST00000501400 A0A1B0GX78 115 aa16.9■□□□□ 0.3
LINC00535-201ENST00000501400 TOX3O15405 576 aaPredicted RBP16.9■□□□□ 0.3
LINC00535-201ENST00000501400 OR5F1O95221 314 aa16.9■□□□□ 0.3
LINC00535-201ENST00000501400 GUSBP08236 651 aa16.9■□□□□ 0.3
LINC00535-201ENST00000501400 PCSK6P29122 969 aa16.9■□□□□ 0.3
LINC00535-201ENST00000501400 CCL7P80098 99 aa16.9■□□□□ 0.3
LINC00535-201ENST00000501400 TEKQ02763 1124 aa16.9■□□□□ 0.3
LINC00535-201ENST00000501400 NNATQ16517 81 aa16.9■□□□□ 0.3
LINC00535-201ENST00000501400 FLYWCH1Q4VC44 716 aa16.9■□□□□ 0.3
LINC00535-201ENST00000501400 QSOX2Q6ZRP7 698 aa16.9■□□□□ 0.3
LINC00535-201ENST00000501400 GDF7Q7Z4P5 450 aa16.9■□□□□ 0.3
LINC00535-201ENST00000501400 MEX3DQ86XN8 651 aaKnown RBP16.9■□□□□ 0.3
LINC00535-201ENST00000501400 PTPMT1Q8WUK0 201 aaPredicted RBP16.9■□□□□ 0.3
LINC00535-201ENST00000501400 PMM1Q92871 262 aa16.9■□□□□ 0.3
LINC00535-201ENST00000501400 SLC38A4Q969I6 547 aa16.9■□□□□ 0.3
LINC00535-201ENST00000501400 FKBP10Q96AY3 582 aa16.9■□□□□ 0.3
LINC00535-201ENST00000501400 RNF31Q96EP0 1072 aa16.9■□□□□ 0.3
LINC00535-201ENST00000501400 SLC41A3Q96GZ6 507 aa16.9■□□□□ 0.3
LINC00535-201ENST00000501400 YIPF2Q9BWQ6 316 aa16.9■□□□□ 0.3
LINC00535-201ENST00000501400 ITPAQ9BY32 194 aa16.9■□□□□ 0.3
LINC00535-201ENST00000501400 VCX3AQ9NNX9 186 aa16.9■□□□□ 0.3
LINC00535-201ENST00000501400 PTTG2Q9NZH5 202 aa16.9■□□□□ 0.3
LINC00535-201ENST00000501400 C17orf105B2RV13 164 aa16.89■□□□□ 0.29
LINC00535-201ENST00000501400 YKT6O15498 198 aa16.89■□□□□ 0.29
LINC00535-201ENST00000501400 MT-ND2P03891 347 aa16.89■□□□□ 0.29
LINC00535-201ENST00000501400 RPLP0P05388 317 aaKnown RBP16.89■□□□□ 0.29
LINC00535-201ENST00000501400 ANKRD34CP0C6C1 535 aa16.89■□□□□ 0.29
LINC00535-201ENST00000501400 GKN3PP0CG01 181 aa16.89■□□□□ 0.29
LINC00535-201ENST00000501400 ITIH1P19827 911 aa16.89■□□□□ 0.29
LINC00535-201ENST00000501400 FBLP22087 321 aaKnown RBP16.89■□□□□ 0.29
LINC00535-201ENST00000501400 TTKP33981 857 aa16.89■□□□□ 0.29
LINC00535-201ENST00000501400 RFX3P48380 749 aa16.89■□□□□ 0.29
LINC00535-201ENST00000501400 RHAGQ02094 409 aa16.89■□□□□ 0.29
LINC00535-201ENST00000501400 C1orf189Q5VU69 101 aa16.89■□□□□ 0.29
LINC00535-201ENST00000501400 SLX4IPQ5VYV7 408 aa16.89■□□□□ 0.29
LINC00535-201ENST00000501400 P3H2Q8IVL5 708 aa16.89■□□□□ 0.29
LINC00535-201ENST00000501400 ASCC3Q8N3C0 2202 aaKnown RBP16.89■□□□□ 0.29
LINC00535-201ENST00000501400 EID2Q8N6I1 236 aa16.89■□□□□ 0.29
LINC00535-201ENST00000501400 ZNF321PQ8N8H1 164 aa16.89■□□□□ 0.29
LINC00535-201ENST00000501400 RCBTB1Q8NDN9 531 aa16.89■□□□□ 0.29
LINC00535-201ENST00000501400 FAR1Q8WVX9 515 aa16.89■□□□□ 0.29
LINC00535-201ENST00000501400 CCDC90BQ9GZT6 254 aa16.89■□□□□ 0.29
LINC00535-201ENST00000501400 ZNF304Q9HCX3 659 aa16.89■□□□□ 0.29
LINC00535-201ENST00000501400 PLCXD1Q9NUJ7 323 aa16.89■□□□□ 0.29
LINC00535-201ENST00000501400 IMPAD1Q9NX62 359 aa16.89■□□□□ 0.29
LINC00535-201ENST00000501400 SERTAD3Q9UJW9 196 aa16.89■□□□□ 0.29
LINC00535-201ENST00000501400 SNX5Q9Y5X3 404 aa16.89■□□□□ 0.29
LINC00535-201ENST00000501400 SOX30O94993 753 aa16.88■□□□□ 0.29
LINC00535-201ENST00000501400 DCKP27707 260 aa16.88■□□□□ 0.29
LINC00535-201ENST00000501400 NUDT6P53370 316 aa16.88■□□□□ 0.29
LINC00535-201ENST00000501400 CDC42P60953 191 aa16.88■□□□□ 0.29
LINC00535-201ENST00000501400 ALDH6A1Q02252 535 aaKnown RBP16.88■□□□□ 0.29
LINC00535-201ENST00000501400 EMX1Q04741 257 aaPredicted RBP16.88■□□□□ 0.29
LINC00535-201ENST00000501400 PDZK1Q5T2W1 519 aa16.88■□□□□ 0.29
LINC00535-201ENST00000501400 C12orf73Q69YU5 71 aa16.88■□□□□ 0.29
LINC00535-201ENST00000501400 B3GNT6Q6ZMB0 384 aa16.88■□□□□ 0.29
LINC00535-201ENST00000501400 AHSA2Q719I0 299 aa16.88■□□□□ 0.29
LINC00535-201ENST00000501400 KIF18BQ86Y91 864 aa16.88■□□□□ 0.29
LINC00535-201ENST00000501400 ARSGQ96EG1 525 aa16.88■□□□□ 0.29
LINC00535-201ENST00000501400 NAA50Q9GZZ1 169 aaKnown RBP16.88■□□□□ 0.29
LINC00535-201ENST00000501400 FKBP14Q9NWM8 211 aa16.88■□□□□ 0.29
LINC00535-201ENST00000501400 PSORS1C1Q9UIG5 152 aa16.88■□□□□ 0.29
LINC00535-201ENST00000501400 TMEM221A6NGB7 291 aa16.88■□□□□ 0.29
LINC00535-201ENST00000501400 NPIPB9F8W1W9 429 aa16.88■□□□□ 0.29
LINC00535-201ENST00000501400 M0R296 226 aa16.88■□□□□ 0.29
LINC00535-201ENST00000501400 LYPD3O95274 346 aa16.88■□□□□ 0.29
LINC00535-201ENST00000501400 HOXD12P35452 270 aa16.88■□□□□ 0.29
LINC00535-201ENST00000501400 OMPP47874 163 aa16.88■□□□□ 0.29
LINC00535-201ENST00000501400 GP2P55259 537 aaKnown RBP16.88■□□□□ 0.29
LINC00535-201ENST00000501400 COX10Q12887 443 aa16.88■□□□□ 0.29
LINC00535-201ENST00000501400 BIKQ13323 160 aa16.88■□□□□ 0.29
LINC00535-201ENST00000501400 MINDY4Q4G0A6 757 aa16.88■□□□□ 0.29
LINC00535-201ENST00000501400 VWA2Q5GFL6 755 aa16.88■□□□□ 0.29
LINC00535-201ENST00000501400 ARHGAP40Q5TG30 622 aa16.88■□□□□ 0.29
LINC00535-201ENST00000501400 YOD1Q5VVQ6 348 aaPredicted RBP16.88■□□□□ 0.29
LINC00535-201ENST00000501400 GPR107Q5VW38 600 aa16.88■□□□□ 0.29
LINC00535-201ENST00000501400 PRICKLE2Q7Z3G6 844 aa16.88■□□□□ 0.29
LINC00535-201ENST00000501400 DTWD2Q8NBA8 298 aa16.88■□□□□ 0.29
LINC00535-201ENST00000501400 TMEM255BQ8WV15 326 aa16.88■□□□□ 0.29
LINC00535-201ENST00000501400 ACOT11Q8WXI4 607 aaPredicted RBP16.88■□□□□ 0.29
LINC00535-201ENST00000501400 PRSS27Q9BQR3 290 aa16.88■□□□□ 0.29
LINC00535-201ENST00000501400 CCNB1IP1Q9NPC3 277 aa16.88■□□□□ 0.29
LINC00535-201ENST00000501400 FBXO4Q9UKT5 387 aa16.88■□□□□ 0.29
LINC00535-201ENST00000501400 IGHV5-10-1A0A0J9YXX1 117 aa16.87■□□□□ 0.29
LINC00535-201ENST00000501400 H3BN98 237 aa16.87■□□□□ 0.29
LINC00535-201ENST00000501400 ZNF701M0R085 212 aaPredicted RBP16.87■□□□□ 0.29
LINC00535-201ENST00000501400 RGS10O43665 173 aa16.87■□□□□ 0.29
LINC00535-201ENST00000501400 INMTO95050 263 aa16.87■□□□□ 0.29
LINC00535-201ENST00000501400 PEX19P40855 299 aa16.87■□□□□ 0.29
LINC00535-201ENST00000501400 MAP2K4P45985 399 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms