RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 SRYQ05066 204 aa16.68■□□□□ 0.26
HOXD11-202ENST00000498438 TP53BP2Q13625 1128 aa16.68■□□□□ 0.26
HOXD11-202ENST00000498438 RCAN2Q14206 197 aa16.68■□□□□ 0.26
HOXD11-202ENST00000498438 LASP1Q14847 261 aaKnown RBP16.68■□□□□ 0.26
HOXD11-202ENST00000498438 LSM12Q3MHD2 195 aaKnown RBP16.68■□□□□ 0.26
HOXD11-202ENST00000498438 ZCCHC12Q6PEW1 402 aa16.68■□□□□ 0.26
HOXD11-202ENST00000498438 FIGNL1Q6PIW4 674 aa16.68■□□□□ 0.26
HOXD11-202ENST00000498438 APOOLQ6UXV4 268 aa16.68■□□□□ 0.26
HOXD11-202ENST00000498438 NATD1Q8N6N6 113 aa16.68■□□□□ 0.26
HOXD11-202ENST00000498438 COX18Q8N8Q8 333 aa16.68■□□□□ 0.26
HOXD11-202ENST00000498438 OR56A1Q8NGH5 318 aa16.68■□□□□ 0.26
HOXD11-202ENST00000498438 ZPLD1Q8TCW7 415 aa16.68■□□□□ 0.26
HOXD11-202ENST00000498438 CHMP6Q96FZ7 201 aa16.68■□□□□ 0.26
HOXD11-202ENST00000498438 TUBA1CQ9BQE3 449 aa16.68■□□□□ 0.26
HOXD11-202ENST00000498438 NEUROD4Q9HD90 331 aa16.68■□□□□ 0.26
HOXD11-202ENST00000498438 MBD3L4A6NDZ8 208 aaPredicted RBP16.67■□□□□ 0.26
HOXD11-202ENST00000498438 MBD3L3A6NE82 208 aaPredicted RBP16.67■□□□□ 0.26
HOXD11-202ENST00000498438 MBD3L5A6NJ08 208 aaPredicted RBP16.67■□□□□ 0.26
HOXD11-202ENST00000498438 ANGPTL1O95841 491 aa16.67■□□□□ 0.26
HOXD11-202ENST00000498438 IL2RAP01589 272 aa16.67■□□□□ 0.26
HOXD11-202ENST00000498438 HK1P19367 917 aa16.67■□□□□ 0.26
HOXD11-202ENST00000498438 BMP5P22003 454 aa16.67■□□□□ 0.26
HOXD11-202ENST00000498438 CCT3P49368 545 aaKnown RBP16.67■□□□□ 0.26
HOXD11-202ENST00000498438 B3GALT5-AS1P59052 145 aa16.67■□□□□ 0.26
HOXD11-202ENST00000498438 GANABQ14697 944 aaKnown RBP16.67■□□□□ 0.26
HOXD11-202ENST00000498438 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.67■□□□□ 0.26
HOXD11-202ENST00000498438 PGS1Q32NB8 556 aa16.67■□□□□ 0.26
HOXD11-202ENST00000498438 SPDYE7PQ495Y7 208 aa16.67■□□□□ 0.26
HOXD11-202ENST00000498438 CAMKMTQ7Z624 323 aa16.67■□□□□ 0.26
HOXD11-202ENST00000498438 ZAR1Q86SH2 424 aa16.67■□□□□ 0.26
HOXD11-202ENST00000498438 RELL2Q8NC24 303 aaPredicted RBP16.67■□□□□ 0.26
HOXD11-202ENST00000498438 MBD3L2Q8NHZ7 208 aaPredicted RBP16.67■□□□□ 0.26
HOXD11-202ENST00000498438 FAM110BQ8TC76 370 aa16.67■□□□□ 0.26
HOXD11-202ENST00000498438 SFXN5Q8TD22 340 aa16.67■□□□□ 0.26
HOXD11-202ENST00000498438 DUSP19Q8WTR2 217 aa16.67■□□□□ 0.26
HOXD11-202ENST00000498438 TLCD1Q96CP7 247 aa16.67■□□□□ 0.26
HOXD11-202ENST00000498438 CALHM2Q9HA72 323 aa16.67■□□□□ 0.26
HOXD11-202ENST00000498438 MEAF6Q9HAF1 191 aa16.67■□□□□ 0.26
HOXD11-202ENST00000498438 TMBIM4Q9HC24 238 aa16.67■□□□□ 0.26
HOXD11-202ENST00000498438 FBXO34Q9NWN3 711 aa16.67■□□□□ 0.26
HOXD11-202ENST00000498438 POLQO75417 2590 aa16.66■□□□□ 0.26
HOXD11-202ENST00000498438 ALG1L2C9J202 215 aa16.66■□□□□ 0.26
HOXD11-202ENST00000498438 DVL2O14641 736 aa16.66■□□□□ 0.26
HOXD11-202ENST00000498438 CFLARO15519 480 aa16.66■□□□□ 0.26
HOXD11-202ENST00000498438 TACC2O95359 2948 aa16.66■□□□□ 0.26
HOXD11-202ENST00000498438 OXSR1O95747 527 aaPredicted RBP16.66■□□□□ 0.26
HOXD11-202ENST00000498438 NGFRP08138 427 aa16.66■□□□□ 0.26
HOXD11-202ENST00000498438 ZNF708P17019 499 aa16.66■□□□□ 0.26
HOXD11-202ENST00000498438 CHMP24386 653 aa16.66■□□□□ 0.26
HOXD11-202ENST00000498438 SSTR2P30874 369 aa16.66■□□□□ 0.26
HOXD11-202ENST00000498438 ZNF136P52737 540 aa16.66■□□□□ 0.26
HOXD11-202ENST00000498438 CLDN18P56856 261 aa16.66■□□□□ 0.26
HOXD11-202ENST00000498438 POU6F2P78424 691 aaPredicted RBP16.66■□□□□ 0.26
HOXD11-202ENST00000498438 CCNJQ5T5M9 372 aa16.66■□□□□ 0.26
HOXD11-202ENST00000498438 RAET1LQ5VY80 246 aa16.66■□□□□ 0.26
HOXD11-202ENST00000498438 OR4F3Q6IEY1 312 aa16.66■□□□□ 0.26
HOXD11-202ENST00000498438 DMRTC2Q8IXT2 367 aaPredicted RBP16.66■□□□□ 0.26
HOXD11-202ENST00000498438 C9orf106Q8NAJ2 232 aa16.66■□□□□ 0.26
HOXD11-202ENST00000498438 OR4C3Q8NH37 302 aa16.66■□□□□ 0.26
HOXD11-202ENST00000498438 OR5AK3PQ8NH89 298 aa16.66■□□□□ 0.26
HOXD11-202ENST00000498438 CDS1Q92903 461 aa16.66■□□□□ 0.26
HOXD11-202ENST00000498438 C1GALT1C1Q96EU7 318 aa16.66■□□□□ 0.26
HOXD11-202ENST00000498438 STACQ99469 402 aa16.66■□□□□ 0.26
HOXD11-202ENST00000498438 G6PC3Q9BUM1 346 aa16.66■□□□□ 0.26
HOXD11-202ENST00000498438 BTBD2Q9BX70 525 aa16.66■□□□□ 0.26
HOXD11-202ENST00000498438 PTGES2Q9H7Z7 377 aa16.66■□□□□ 0.26
HOXD11-202ENST00000498438 DUSP22Q9NRW4 184 aa16.66■□□□□ 0.26
HOXD11-202ENST00000498438 GPATCH2Q9NW75 528 aa16.66■□□□□ 0.26
HOXD11-202ENST00000498438 ANKHD1Q8IWZ3 2542 aaKnown RBP16.66■□□□□ 0.26
HOXD11-202ENST00000498438 IGLV3-32A0A0A0MS00 114 aa16.65■□□□□ 0.26
HOXD11-202ENST00000498438 CLCA1A8K7I4 914 aa16.65■□□□□ 0.26
HOXD11-202ENST00000498438 GMFGO60234 142 aa16.65■□□□□ 0.26
HOXD11-202ENST00000498438 LBPP18428 481 aa16.65■□□□□ 0.26
HOXD11-202ENST00000498438 TBXA2RP21731 343 aa16.65■□□□□ 0.26
HOXD11-202ENST00000498438 SOAT1P35610 550 aa16.65■□□□□ 0.26
HOXD11-202ENST00000498438 SLC18A1P54219 525 aa16.65■□□□□ 0.26
HOXD11-202ENST00000498438 HBA1P69905 142 aa16.65■□□□□ 0.26
HOXD11-202ENST00000498438 C17orf67Q0P5P2 114 aa16.65■□□□□ 0.26
HOXD11-202ENST00000498438 CDC73Q6P1J9 531 aa16.65■□□□□ 0.26
HOXD11-202ENST00000498438 PLXDC2Q6UX71 529 aa16.65■□□□□ 0.26
HOXD11-202ENST00000498438 ADGRE4PQ86SQ3 457 aa16.65■□□□□ 0.26
HOXD11-202ENST00000498438 CLECL1Q8IZS7 167 aa16.65■□□□□ 0.26
HOXD11-202ENST00000498438 GATSQ8NAP1 163 aa16.65■□□□□ 0.26
HOXD11-202ENST00000498438 MOAP1Q96BY2 351 aa16.65■□□□□ 0.26
HOXD11-202ENST00000498438 C14orf79Q96F83 325 aa16.65■□□□□ 0.26
HOXD11-202ENST00000498438 ACTRT3Q9BYD9 372 aa16.65■□□□□ 0.26
HOXD11-202ENST00000498438 DPY30Q9C005 99 aa16.65■□□□□ 0.26
HOXD11-202ENST00000498438 PIGUQ9H490 435 aa16.65■□□□□ 0.26
HOXD11-202ENST00000498438 THAP1Q9NVV9 213 aa16.65■□□□□ 0.26
HOXD11-202ENST00000498438 GIN1Q9NXP7 522 aa16.65■□□□□ 0.26
HOXD11-202ENST00000498438 NKIRAS1Q9NYS0 192 aa16.65■□□□□ 0.26
HOXD11-202ENST00000498438 FAF1Q9UNN5 650 aaPredicted RBP16.65■□□□□ 0.26
HOXD11-202ENST00000498438 CSMD2Q7Z408 3487 aa16.65■□□□□ 0.26
HOXD11-202ENST00000498438 MED12LQ86YW9 2145 aa16.64■□□□□ 0.25
HOXD11-202ENST00000498438 NDUFB5O43674 189 aa16.64■□□□□ 0.25
HOXD11-202ENST00000498438 SNNO75324 88 aaPredicted RBP16.64■□□□□ 0.25
HOXD11-202ENST00000498438 KRT16P08779 473 aa16.64■□□□□ 0.25
HOXD11-202ENST00000498438 POU3F2P20265 443 aaPredicted RBP16.64■□□□□ 0.25
HOXD11-202ENST00000498438 LCN1P31025 176 aa16.64■□□□□ 0.25
HOXD11-202ENST00000498438 TLE4Q04727 773 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms