RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 PPIAP62937 165 aaKnown RBP7.96□□□□□ -1.13
U2AF1-212ENST00000496462 EEF1A1P68104 462 aaKnown RBP7.96□□□□□ -1.13
U2AF1-212ENST00000496462 RUNDC3AQ59EK9 446 aa7.96□□□□□ -1.13
U2AF1-212ENST00000496462 EEF1A1P5Q5VTE0 462 aa7.96□□□□□ -1.13
U2AF1-212ENST00000496462 SAXO2Q658L1 398 aa7.96□□□□□ -1.13
U2AF1-212ENST00000496462 CPZQ66K79 652 aa7.96□□□□□ -1.13
U2AF1-212ENST00000496462 C5orf46Q6UWT4 87 aa7.96□□□□□ -1.13
U2AF1-212ENST00000496462 SERPINA11Q86U17 422 aa7.96□□□□□ -1.13
U2AF1-212ENST00000496462 PSD4Q8NDX1 1056 aa7.96□□□□□ -1.13
U2AF1-212ENST00000496462 OR52E4Q8NGH9 312 aa7.96□□□□□ -1.13
U2AF1-212ENST00000496462 SMPDL3BQ92485 455 aa7.96□□□□□ -1.13
U2AF1-212ENST00000496462 SH3YL1Q96HL8 342 aaPredicted RBP7.96□□□□□ -1.13
U2AF1-212ENST00000496462 BTBD9Q96Q07 612 aa7.96□□□□□ -1.13
U2AF1-212ENST00000496462 RASL10BQ96S79 203 aa7.96□□□□□ -1.13
U2AF1-212ENST00000496462 ZNF559Q9BR84 538 aa7.96□□□□□ -1.13
U2AF1-212ENST00000496462 KLHL4Q9C0H6 718 aa7.96□□□□□ -1.13
U2AF1-212ENST00000496462 OR2W5A6NFC9 320 aa7.96□□□□□ -1.13
U2AF1-212ENST00000496462 WASHC1A8K0Z3 465 aa7.96□□□□□ -1.13
U2AF1-212ENST00000496462 M0QX08 132 aa7.96□□□□□ -1.13
U2AF1-212ENST00000496462 ZNF264O43296 627 aa7.96□□□□□ -1.13
U2AF1-212ENST00000496462 SOX3P41225 446 aa7.96□□□□□ -1.13
U2AF1-212ENST00000496462 SLC37A1P57057 533 aa7.96□□□□□ -1.13
U2AF1-212ENST00000496462 SOX8P57073 446 aa7.96□□□□□ -1.13
U2AF1-212ENST00000496462 ARHGAP11BQ3KRB8 267 aa7.96□□□□□ -1.13
U2AF1-212ENST00000496462 KRTCAP3Q53RY4 240 aa7.96□□□□□ -1.13
U2AF1-212ENST00000496462 NANOGP8Q6NSW7 305 aa7.96□□□□□ -1.13
U2AF1-212ENST00000496462 PRICKLE2Q7Z3G6 844 aa7.96□□□□□ -1.13
U2AF1-212ENST00000496462 GALNTL5Q7Z4T8 443 aa7.96□□□□□ -1.13
U2AF1-212ENST00000496462 RIMKLAQ8IXN7 391 aa7.96□□□□□ -1.13
U2AF1-212ENST00000496462 ELP5Q8TE02 316 aa7.96□□□□□ -1.13
U2AF1-212ENST00000496462 ZFP90Q8TF47 636 aa7.96□□□□□ -1.13
U2AF1-212ENST00000496462 GEMIN6Q8WXD5 167 aaKnown RBP7.96□□□□□ -1.13
U2AF1-212ENST00000496462 TMEM19Q96HH6 336 aa7.96□□□□□ -1.13
U2AF1-212ENST00000496462 ZNF681Q96N22 645 aa7.96□□□□□ -1.13
U2AF1-212ENST00000496462 AKIRIN1Q9H9L7 192 aaPredicted RBP7.96□□□□□ -1.13
U2AF1-212ENST00000496462 NANOGQ9H9S0 305 aa7.96□□□□□ -1.13
U2AF1-212ENST00000496462 ZFP64Q9NPA5 681 aa7.96□□□□□ -1.13
U2AF1-212ENST00000496462 QPCTLQ9NXS2 382 aa7.96□□□□□ -1.13
U2AF1-212ENST00000496462 TAS2R10Q9NYW0 307 aa7.96□□□□□ -1.13
U2AF1-212ENST00000496462 MCTS1Q9ULC4 181 aaKnown RBP7.96□□□□□ -1.13
U2AF1-212ENST00000496462 PCM1Q15154 2024 aa7.96□□□□□ -1.14
U2AF1-212ENST00000496462 UGT2B17O75795 530 aa7.96□□□□□ -1.14
U2AF1-212ENST00000496462 UBTFL6P0CB48 400 aaPredicted RBP7.96□□□□□ -1.14
U2AF1-212ENST00000496462 CAPN3P20807 821 aa7.96□□□□□ -1.14
U2AF1-212ENST00000496462 DPP4P27487 766 aa7.96□□□□□ -1.14
U2AF1-212ENST00000496462 AQP1P29972 269 aa7.96□□□□□ -1.14
U2AF1-212ENST00000496462 PIGAP37287 484 aa7.96□□□□□ -1.14
U2AF1-212ENST00000496462 ZNF385BQ569K4 471 aa7.96□□□□□ -1.14
U2AF1-212ENST00000496462 FAM91A1Q658Y4 838 aa7.96□□□□□ -1.14
U2AF1-212ENST00000496462 PLCZ1Q86YW0 608 aa7.96□□□□□ -1.14
U2AF1-212ENST00000496462 LINC00471Q8N535 108 aa7.96□□□□□ -1.14
U2AF1-212ENST00000496462 EXD3Q8N9H8 876 aa7.96□□□□□ -1.14
U2AF1-212ENST00000496462 ZNF721Q8TF20 911 aa7.96□□□□□ -1.14
U2AF1-212ENST00000496462 SLC38A4Q969I6 547 aa7.96□□□□□ -1.14
U2AF1-212ENST00000496462 INPP5KQ9BT40 448 aa7.96□□□□□ -1.14
U2AF1-212ENST00000496462 PLA2G3Q9NZ20 509 aa7.96□□□□□ -1.14
U2AF1-212ENST00000496462 MKLN1Q9UL63 735 aa7.96□□□□□ -1.14
U2AF1-212ENST00000496462 SERINC4A6NH21 518 aa7.95□□□□□ -1.14
U2AF1-212ENST00000496462 DEAF1O75398 565 aaPredicted RBP7.95□□□□□ -1.14
U2AF1-212ENST00000496462 KRT33AO76009 404 aa7.95□□□□□ -1.14
U2AF1-212ENST00000496462 CBX6O95503 412 aa7.95□□□□□ -1.14
U2AF1-212ENST00000496462 WDPCPO95876 746 aa7.95□□□□□ -1.14
U2AF1-212ENST00000496462 SP1P08047 785 aa7.95□□□□□ -1.14
U2AF1-212ENST00000496462 ARAFP10398 606 aa7.95□□□□□ -1.14
U2AF1-212ENST00000496462 PEPDP12955 493 aa7.95□□□□□ -1.14
U2AF1-212ENST00000496462 ETFAP13804 333 aa7.95□□□□□ -1.14
U2AF1-212ENST00000496462 POU3F2P20265 443 aaPredicted RBP7.95□□□□□ -1.14
U2AF1-212ENST00000496462 KCNC4Q03721 635 aa7.95□□□□□ -1.14
U2AF1-212ENST00000496462 LRIF1Q5T3J3 769 aa7.95□□□□□ -1.14
U2AF1-212ENST00000496462 PRAMEF20Q5VT98 475 aa7.95□□□□□ -1.14
U2AF1-212ENST00000496462 TMEM211Q6ICI0 200 aa7.95□□□□□ -1.14
U2AF1-212ENST00000496462 GFRALQ6UXV0 394 aa7.95□□□□□ -1.14
U2AF1-212ENST00000496462 FBXW8Q8N3Y1 598 aa7.95□□□□□ -1.14
U2AF1-212ENST00000496462 DTWD1Q8N5C7 304 aa7.95□□□□□ -1.14
U2AF1-212ENST00000496462 PIK3R3Q92569 461 aa7.95□□□□□ -1.14
U2AF1-212ENST00000496462 SLC47A1Q96FL8 570 aa7.95□□□□□ -1.14
U2AF1-212ENST00000496462 PHF12Q96QT6 1004 aa7.95□□□□□ -1.14
U2AF1-212ENST00000496462 ZNF347Q96SE7 839 aa7.95□□□□□ -1.14
U2AF1-212ENST00000496462 CCDC106Q9BWC9 280 aa7.95□□□□□ -1.14
U2AF1-212ENST00000496462 PINK1Q9BXM7 581 aa7.95□□□□□ -1.14
U2AF1-212ENST00000496462 ANKRD10Q9NXR5 420 aa7.95□□□□□ -1.14
U2AF1-212ENST00000496462 PCDHGB6Q9Y5F9 930 aa7.95□□□□□ -1.14
U2AF1-212ENST00000496462 MYLKQ15746 1914 aa7.95□□□□□ -1.14
U2AF1-212ENST00000496462 UNC5CO95185 931 aa7.95□□□□□ -1.14
U2AF1-212ENST00000496462 PCGF2P35227 344 aa7.95□□□□□ -1.14
U2AF1-212ENST00000496462 MEOX1P50221 254 aa7.95□□□□□ -1.14
U2AF1-212ENST00000496462 CTBP2P56545 445 aa7.95□□□□□ -1.14
U2AF1-212ENST00000496462 RPS26P62854 115 aaKnown RBP7.95□□□□□ -1.14
U2AF1-212ENST00000496462 CSNK2A1P68400 391 aaPredicted RBP7.95□□□□□ -1.14
U2AF1-212ENST00000496462 SLC25A3Q00325 362 aa7.95□□□□□ -1.14
U2AF1-212ENST00000496462 GAB1Q13480 694 aa7.95□□□□□ -1.14
U2AF1-212ENST00000496462 NPTX1Q15818 432 aa7.95□□□□□ -1.14
U2AF1-212ENST00000496462 LCN10Q6JVE6 187 aa7.95□□□□□ -1.14
U2AF1-212ENST00000496462 DEF8Q6ZN54 512 aa7.95□□□□□ -1.14
U2AF1-212ENST00000496462 HDDC2Q7Z4H3 204 aa7.95□□□□□ -1.14
U2AF1-212ENST00000496462 GHDCQ8N2G8 530 aa7.95□□□□□ -1.14
U2AF1-212ENST00000496462 SLC16A11Q8NCK7 471 aa7.95□□□□□ -1.14
U2AF1-212ENST00000496462 FDCSPQ8NFU4 85 aa7.95□□□□□ -1.14
U2AF1-212ENST00000496462 SLC25A43Q8WUT9 341 aaPredicted RBP7.95□□□□□ -1.14
U2AF1-212ENST00000496462 DNAJA4Q8WW22 397 aaPredicted RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms