RNA–Protein interactions for RNA: ENST00000496104.1

XPA-204, Transcript of XPA, DNA damage recognition and repair factor, human

TSL 3

Gene XPA, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
XPA-204	ENST00000496104	FAM72B	Q86X60	149 aa		4.22	□□□□□ -1.73
XPA-204	ENST00000496104	PALM2	Q8IXS6	379 aa		4.22	□□□□□ -1.73
XPA-204	ENST00000496104	CENPL	Q8N0S6	344 aa	Predicted RBP	4.22	□□□□□ -1.73
XPA-204	ENST00000496104	RFLNB	Q8N5W9	214 aa		4.22	□□□□□ -1.73
XPA-204	ENST00000496104	TRIML2	Q8N7C3	387 aa		4.22	□□□□□ -1.73
XPA-204	ENST00000496104	PDPR	Q8NCN5	879 aa		4.22	□□□□□ -1.73
XPA-204	ENST00000496104	ADPRHL1	Q8NDY3	354 aa		4.22	□□□□□ -1.73
XPA-204	ENST00000496104	DNAAF1	Q8NEP3	725 aa		4.22	□□□□□ -1.73
XPA-204	ENST00000496104	BBS1	Q8NFJ9	593 aa		4.22	□□□□□ -1.73
XPA-204	ENST00000496104	NUDT10	Q8NFP7	164 aa		4.22	□□□□□ -1.73
XPA-204	ENST00000496104	OR52N2	Q8NGI0	321 aa		4.22	□□□□□ -1.73
XPA-204	ENST00000496104	OR56B1	Q8NGI3	324 aa		4.22	□□□□□ -1.73
XPA-204	ENST00000496104	OR5M9	Q8NGP3	310 aa		4.22	□□□□□ -1.73
XPA-204	ENST00000496104	OR5M3	Q8NGP4	307 aa		4.22	□□□□□ -1.73
XPA-204	ENST00000496104	OCC1	Q8TAD7	63 aa		4.22	□□□□□ -1.73
XPA-204	ENST00000496104	SLC35B2	Q8TB61	432 aa		4.22	□□□□□ -1.73
XPA-204	ENST00000496104	GOLGA5	Q8TBA6	731 aa		4.22	□□□□□ -1.73
XPA-204	ENST00000496104	SLC20A1	Q8WUM9	679 aa		4.22	□□□□□ -1.73
XPA-204	ENST00000496104	GCDH	Q92947	438 aa	Predicted RBP	4.22	□□□□□ -1.73
XPA-204	ENST00000496104	AP2M1	Q96CW1	435 aa		4.22	□□□□□ -1.73
XPA-204	ENST00000496104	PGM2	Q96G03	612 aa		4.22	□□□□□ -1.73
XPA-204	ENST00000496104	NUDT11	Q96G61	164 aa		4.22	□□□□□ -1.73
XPA-204	ENST00000496104	BSCL2	Q96G97	398 aa	Predicted RBP	4.22	□□□□□ -1.73
XPA-204	ENST00000496104	SPATA13	Q96N96	652 aa		4.22	□□□□□ -1.73
XPA-204	ENST00000496104	CLIC6	Q96NY7	704 aa		4.22	□□□□□ -1.73
XPA-204	ENST00000496104	MCCC1	Q96RQ3	725 aa	Predicted RBP	4.22	□□□□□ -1.73
XPA-204	ENST00000496104	ZNF747	Q9BV97	191 aa		4.22	□□□□□ -1.73
XPA-204	ENST00000496104	FICD	Q9BVA6	458 aa		4.22	□□□□□ -1.73
XPA-204	ENST00000496104	GPR61	Q9BZJ8	451 aa		4.22	□□□□□ -1.73
XPA-204	ENST00000496104	TM6SF1	Q9BZW5	370 aa		4.22	□□□□□ -1.73
XPA-204	ENST00000496104	NUAK2	Q9H093	628 aa		4.22	□□□□□ -1.73
XPA-204	ENST00000496104	SHARPIN	Q9H0F6	387 aa		4.22	□□□□□ -1.73
XPA-204	ENST00000496104	P2RY12	Q9H244	342 aa		4.22	□□□□□ -1.73
XPA-204	ENST00000496104	UBQLN3	Q9H347	655 aa		4.22	□□□□□ -1.73
XPA-204	ENST00000496104	GOLPH3L	Q9H4A5	285 aa		4.22	□□□□□ -1.73
XPA-204	ENST00000496104	COG4	Q9H9E3	785 aa		4.22	□□□□□ -1.73
XPA-204	ENST00000496104	UBTD1	Q9HAC8	227 aa		4.22	□□□□□ -1.73
XPA-204	ENST00000496104	MRM3	Q9HC36	420 aa	Known RBP	4.22	□□□□□ -1.73
XPA-204	ENST00000496104	GLOD4	Q9HC38	313 aa		4.22	□□□□□ -1.73
XPA-204	ENST00000496104	SLCO1C1	Q9NYB5	712 aa		4.22	□□□□□ -1.73
XPA-204	ENST00000496104	ATXN10	Q9UBB4	475 aa		4.22	□□□□□ -1.73
XPA-204	ENST00000496104	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	4.22	□□□□□ -1.73
XPA-204	ENST00000496104	MAU2	Q9Y6X3	613 aa		4.22	□□□□□ -1.73
XPA-204	ENST00000496104	IGHV4-30-2	A0A087WSY4	118 aa		4.21	□□□□□ -1.74
XPA-204	ENST00000496104	NPIPB13	A6NJU9	1138 aa		4.21	□□□□□ -1.74
XPA-204	ENST00000496104	NPIPB5	A8MRT5	1133 aa		4.21	□□□□□ -1.74
XPA-204	ENST00000496104	CXorf49	A8MYA2	514 aa	Predicted RBP	4.21	□□□□□ -1.74
XPA-204	ENST00000496104	FAM157A	C9JC47	383 aa		4.21	□□□□□ -1.74
XPA-204	ENST00000496104	NPIPB4	C9JG80	1138 aa		4.21	□□□□□ -1.74
XPA-204	ENST00000496104	PRR23D1	E9PI22	279 aa	Predicted RBP	4.21	□□□□□ -1.74
XPA-204	ENST00000496104	HS3ST1	O14792	307 aa		4.21	□□□□□ -1.74
XPA-204	ENST00000496104	CHUK	O15111	745 aa		4.21	□□□□□ -1.74
XPA-204	ENST00000496104	ST8SIA3	O43173	380 aa		4.21	□□□□□ -1.74
XPA-204	ENST00000496104	TCF21	O43680	179 aa		4.21	□□□□□ -1.74
XPA-204	ENST00000496104	NME2P1	O60361	137 aa		4.21	□□□□□ -1.74
XPA-204	ENST00000496104	NDUFS7	O75251	213 aa		4.21	□□□□□ -1.74
XPA-204	ENST00000496104	GLCE	O94923	617 aa		4.21	□□□□□ -1.74
XPA-204	ENST00000496104	BCL10	O95999	233 aa		4.21	□□□□□ -1.74
XPA-204	ENST00000496104	JUN	P05412	331 aa	Known RBP	4.21	□□□□□ -1.74
XPA-204	ENST00000496104	CHRM2	P08172	466 aa		4.21	□□□□□ -1.74
XPA-204	ENST00000496104	SBK2	P0C263	348 aa		4.21	□□□□□ -1.74
XPA-204	ENST00000496104	PRR23D2	P0DMB1	279 aa	Predicted RBP	4.21	□□□□□ -1.74
XPA-204	ENST00000496104	IGHV4-31	P0DP07	118 aa		4.21	□□□□□ -1.74
XPA-204	ENST00000496104	VSIG10L2	P0DP72	767 aa		4.21	□□□□□ -1.74
XPA-204	ENST00000496104	ITGAL	P20701	1170 aa		4.21	□□□□□ -1.74
XPA-204	ENST00000496104	SERPINB6	P35237	376 aa		4.21	□□□□□ -1.74
XPA-204	ENST00000496104	GZMK	P49863	264 aa		4.21	□□□□□ -1.74
XPA-204	ENST00000496104	SUCLG1	P53597	346 aa	Known RBP	4.21	□□□□□ -1.74
XPA-204	ENST00000496104	ATP5J2	P56134	94 aa		4.21	□□□□□ -1.74
XPA-204	ENST00000496104	CLRN1	P58418	232 aa		4.21	□□□□□ -1.74
XPA-204	ENST00000496104	EIF3E	P60228	445 aa	Known RBP	4.21	□□□□□ -1.74
XPA-204	ENST00000496104	ABAT	P80404	500 aa		4.21	□□□□□ -1.74
XPA-204	ENST00000496104	VLDLR	P98155	873 aa		4.21	□□□□□ -1.74
XPA-204	ENST00000496104	SORD	Q00796	357 aa		4.21	□□□□□ -1.74
XPA-204	ENST00000496104	EEF1A2	Q05639	463 aa	Known RBP	4.21	□□□□□ -1.74
XPA-204	ENST00000496104	ZNF33B	Q06732	778 aa		4.21	□□□□□ -1.74
XPA-204	ENST00000496104	ZNF844	Q08AG5	666 aa		4.21	□□□□□ -1.74
XPA-204	ENST00000496104	HSPB3	Q12988	150 aa		4.21	□□□□□ -1.74
XPA-204	ENST00000496104	LCP2	Q13094	533 aa		4.21	□□□□□ -1.74
XPA-204	ENST00000496104	FHL3	Q13643	280 aa		4.21	□□□□□ -1.74
XPA-204	ENST00000496104	DHX34	Q14147	1143 aa	Known RBP	4.21	□□□□□ -1.74
XPA-204	ENST00000496104	FASTK	Q14296	549 aa	Known RBP	4.21	□□□□□ -1.74
XPA-204	ENST00000496104	FGFBP1	Q14512	234 aa		4.21	□□□□□ -1.74
XPA-204	ENST00000496104	KRT33B	Q14525	404 aa		4.21	□□□□□ -1.74
XPA-204	ENST00000496104	LARS2	Q15031	903 aa	Known RBP	4.21	□□□□□ -1.74
XPA-204	ENST00000496104	RNPS1	Q15287	305 aa	Known RBP	4.21	□□□□□ -1.74
XPA-204	ENST00000496104	CAMK4	Q16566	473 aa		4.21	□□□□□ -1.74
XPA-204	ENST00000496104	SGO1	Q5FBB7	561 aa		4.21	□□□□□ -1.74
XPA-204	ENST00000496104	ARMC12	Q5T9G4	340 aa		4.21	□□□□□ -1.74
XPA-204	ENST00000496104	ABHD17B	Q5VST6	288 aa		4.21	□□□□□ -1.74
XPA-204	ENST00000496104	PRAMEF8	Q5VWM4	474 aa		4.21	□□□□□ -1.74
XPA-204	ENST00000496104	H3F3C	Q6NXT2	135 aa		4.21	□□□□□ -1.74
XPA-204	ENST00000496104	AAGAB	Q6PD74	315 aa		4.21	□□□□□ -1.74
XPA-204	ENST00000496104	CORO6	Q6QEF8	472 aa		4.21	□□□□□ -1.74
XPA-204	ENST00000496104	WASH2P	Q6VEQ5	465 aa		4.21	□□□□□ -1.74
XPA-204	ENST00000496104	NHLRC1	Q6VVB1	395 aa		4.21	□□□□□ -1.74
XPA-204	ENST00000496104	WDR88	Q6ZMY6	472 aa		4.21	□□□□□ -1.74
XPA-204	ENST00000496104	KRT222	Q8N1A0	295 aa		4.21	□□□□□ -1.74
XPA-204	ENST00000496104	GBP7	Q8N8V2	638 aa	Predicted RBP	4.21	□□□□□ -1.74
XPA-204	ENST00000496104	SETD9	Q8NE22	299 aa		4.21	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms