RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 NMNAT1Q9HAN9 279 aaPredicted RBP9.53□□□□□ -0.88
HDAC3-214ENST00000495485 FOLH1BQ9HBA9 442 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 SIDT1Q9NXL6 827 aaKnown RBP9.53□□□□□ -0.88
HDAC3-214ENST00000495485 TMEFF2Q9UIK5 374 aaPredicted RBP9.53□□□□□ -0.88
HDAC3-214ENST00000495485 ZNF443Q9Y2A4 671 aaPredicted RBP9.53□□□□□ -0.88
HDAC3-214ENST00000495485 TPRKBQ9Y3C4 175 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 HEMK1Q9Y5R4 338 aaPredicted RBP9.53□□□□□ -0.88
HDAC3-214ENST00000495485 MAGED1Q9Y5V3 778 aaPredicted RBP9.53□□□□□ -0.88
HDAC3-214ENST00000495485 KCNE3Q9Y6H6 103 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 CLCA3PQ9Y6N3 262 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 SDK2Q58EX2 2172 aa9.53□□□□□ -0.88
HDAC3-214ENST00000495485 ADAMTS20P59510 1910 aa9.52□□□□□ -0.88
HDAC3-214ENST00000495485 PRAMEF27A3QJZ7 478 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 DPPA5A6NC42 116 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 AGAP5A6NIR3 686 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 EFCAB7A8K855 629 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 H3BMH7 237 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 OR10H3O60404 316 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 BRINP1O60477 761 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 FMO6PO60774 539 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 OR5F1O95221 314 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 CD63P08962 238 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 CCDC159P0C7I6 412 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 NID1P14543 1247 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 TNFRSF1BP20333 461 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 AGXTP21549 392 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 RORAP35398 523 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 LIMS1P48059 325 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 PGDP52209 483 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 CDC42P60953 191 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 CXCR4P61073 352 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 MAT1AQ00266 395 aaKnown RBP9.52□□□□□ -0.89
HDAC3-214ENST00000495485 MGAT2Q10469 447 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 FUT5Q11128 374 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 GANABQ14697 944 aaKnown RBP9.52□□□□□ -0.89
HDAC3-214ENST00000495485 EXOSC7Q15024 291 aaKnown RBP9.52□□□□□ -0.89
HDAC3-214ENST00000495485 ELAVL1Q15717 326 aaKnown RBP9.52□□□□□ -0.89
HDAC3-214ENST00000495485 DECR1Q16698 335 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 CYP27C1Q4G0S4 372 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 FLYWCH1Q4VC44 716 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 EXOSC6Q5RKV6 272 aaKnown RBP9.52□□□□□ -0.89
HDAC3-214ENST00000495485 C6orf141Q5SZD1 244 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 RNF220Q5VTB9 566 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 HLA-DQA1Q5Y7H0 255 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 TYW3Q6IPR3 259 aaKnown RBP9.52□□□□□ -0.89
HDAC3-214ENST00000495485 TCTN3Q6NUS6 607 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 UNQ6494/PRO21346Q6UXR6 183 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 PLEKHM3Q6ZWE6 761 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 GALNT5Q7Z7M9 940 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 P3H2Q8IVL5 708 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 CMIPQ8IY22 773 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 BMPERQ8N8U9 685 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 KDF1Q8NAX2 398 aaPredicted RBP9.52□□□□□ -0.89
HDAC3-214ENST00000495485 ZNF527Q8NB42 609 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 FGF11Q92914 225 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 CLIP3Q96DZ5 547 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 HRASLS5Q96KN8 279 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 LRFN5Q96NI6 719 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 MBOAT4Q96T53 435 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 RBCK1Q9BYM8 510 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 PRRG3Q9BZD7 231 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 DPH1Q9BZG8 443 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 UCK2Q9BZX2 261 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 TGIF2Q9GZN2 237 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 CCNB1IP1Q9NPC3 277 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 ASCL3Q9NQ33 180 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 PNO1Q9NRX1 252 aaKnown RBP9.52□□□□□ -0.89
HDAC3-214ENST00000495485 SLC39A1Q9NY26 324 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 VNN3Q9NY84 501 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 COPS7AQ9UBW8 275 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 MKLN1Q9UL63 735 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 OR10H1Q9Y4A9 318 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 SNX5Q9Y5X3 404 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 MAU2Q9Y6X3 613 aa9.52□□□□□ -0.89
HDAC3-214ENST00000495485 CFAP47Q6ZTR5 3102 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 NINQ8N4C6 2090 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 OR6C76A6NM76 312 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 EIF4E1BA6NMX2 242 aaKnown RBP9.51□□□□□ -0.89
HDAC3-214ENST00000495485 C17orf105B2RV13 164 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 STMND1H3BQB6 276 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 J3KTA2 159 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 PCDH17O14917 1159 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 KIAA0513O60268 411 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 NME6O75414 186 aaPredicted RBP9.51□□□□□ -0.89
HDAC3-214ENST00000495485 CDC123O75794 336 aaPredicted RBP9.51□□□□□ -0.89
HDAC3-214ENST00000495485 TNFSF15O95150 251 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 CBX7O95931 251 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 CTSBP07858 339 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 GNAO1P09471 354 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 CT62P0C5K7 136 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 ATP6V1B1P15313 513 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 ENDOUP21128 410 aaKnown RBP9.51□□□□□ -0.89
HDAC3-214ENST00000495485 MAOAP21397 527 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 RPS4Y1P22090 263 aaKnown RBP9.51□□□□□ -0.89
HDAC3-214ENST00000495485 PTGER1P34995 402 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 KRT20P35900 424 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 MAP3K8P41279 467 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 GCGRP47871 477 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 OR1D4P47884 311 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 EMDP50402 254 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms