RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 SLC41A3Q96GZ6 507 aa9.65□□□□□ -0.86
SAMM50-206ENST00000494795 SLC38A3Q99624 504 aa9.65□□□□□ -0.86
SAMM50-206ENST00000494795 PRSS27Q9BQR3 290 aa9.65□□□□□ -0.86
SAMM50-206ENST00000494795 TSSK6Q9BXA6 273 aa9.65□□□□□ -0.86
SAMM50-206ENST00000494795 SAP130Q9H0E3 1048 aa9.65□□□□□ -0.86
SAMM50-206ENST00000494795 MED20Q9H944 212 aa9.65□□□□□ -0.86
SAMM50-206ENST00000494795 QPCTLQ9NXS2 382 aa9.65□□□□□ -0.86
SAMM50-206ENST00000494795 NTMQ9P121 344 aa9.65□□□□□ -0.86
SAMM50-206ENST00000494795 FBXL21Q9UKT6 434 aa9.65□□□□□ -0.86
SAMM50-206ENST00000494795 TMEM131Q92545 1883 aa9.65□□□□□ -0.86
SAMM50-206ENST00000494795 AGAP5A6NIR3 686 aa9.65□□□□□ -0.87
SAMM50-206ENST00000494795 LRRN3E7EW58 273 aa9.65□□□□□ -0.87
SAMM50-206ENST00000494795 PDGFBP01127 241 aaPredicted RBP9.65□□□□□ -0.87
SAMM50-206ENST00000494795 PROS1P07225 676 aa9.65□□□□□ -0.87
SAMM50-206ENST00000494795 POU3F3P20264 500 aaPredicted RBP9.65□□□□□ -0.87
SAMM50-206ENST00000494795 PDZK1Q5T2W1 519 aa9.65□□□□□ -0.87
SAMM50-206ENST00000494795 ARMC6Q6NXE6 501 aa9.65□□□□□ -0.87
SAMM50-206ENST00000494795 NPSR1Q6W5P4 371 aa9.65□□□□□ -0.87
SAMM50-206ENST00000494795 ZNF655Q8N720 491 aaPredicted RBP9.65□□□□□ -0.87
SAMM50-206ENST00000494795 ZFP41Q8N8Y5 198 aa9.65□□□□□ -0.87
SAMM50-206ENST00000494795 IPCEF1Q8WWN9 437 aaPredicted RBP9.65□□□□□ -0.87
SAMM50-206ENST00000494795 CTHRC1Q96CG8 243 aa9.65□□□□□ -0.87
SAMM50-206ENST00000494795 MMABQ96EY8 250 aaPredicted RBP9.65□□□□□ -0.87
SAMM50-206ENST00000494795 DPH1Q9BZG8 443 aa9.65□□□□□ -0.87
SAMM50-206ENST00000494795 LRRN3Q9H3W5 708 aa9.65□□□□□ -0.87
SAMM50-206ENST00000494795 IFT52Q9Y366 437 aa9.65□□□□□ -0.87
SAMM50-206ENST00000494795 ENTPD2Q9Y5L3 495 aa9.65□□□□□ -0.87
SAMM50-206ENST00000494795 CSNK1G3Q9Y6M4 447 aa9.65□□□□□ -0.87
SAMM50-206ENST00000494795 ASCC3Q8N3C0 2202 aaKnown RBP9.64□□□□□ -0.87
SAMM50-206ENST00000494795 ARRDC5A6NEK1 342 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 DSCR3O14972 297 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 GMFGO60234 142 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 ZGLP1P0C6A0 271 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 DBTP11182 482 aaKnown RBP9.64□□□□□ -0.87
SAMM50-206ENST00000494795 MAKP20794 623 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 CD27P26842 260 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 ETV5P41161 510 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 CAPZBP47756 277 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 GABRA4P48169 554 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 ETV1P50549 477 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 TBCEQ15813 527 aaPredicted RBP9.64□□□□□ -0.87
SAMM50-206ENST00000494795 SLC35F1Q5T1Q4 408 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 SLC34A3Q8N130 599 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 RASSF5Q8WWW0 418 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 TMEM203Q969S6 136 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 SH3YL1Q96HL8 342 aaPredicted RBP9.64□□□□□ -0.87
SAMM50-206ENST00000494795 CNPPD1Q9BV87 410 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 SLIRPQ9GZT3 109 aaKnown RBP9.64□□□□□ -0.87
SAMM50-206ENST00000494795 ZNF350Q9GZX5 532 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 LYRM4Q9HD34 91 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 SOHLH2Q9NX45 425 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 KLK4Q9Y5K2 254 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 RNF215Q9Y6U7 377 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 FER1L5A0AVI2 2057 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 CEP192Q8TEP8 1941 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 URADA6NGE7 173 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 CHURC1-FNTBB4DL54 471 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 ARHGAP33O14559 1287 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 HRO43593 1189 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 AIREO43918 545 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 CSO75390 466 aaKnown RBP9.64□□□□□ -0.87
SAMM50-206ENST00000494795 WISP1O95388 367 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 NGFRP08138 427 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 BMP4P12644 408 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 RGS6P49758 472 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 ARFIP1P53367 373 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 EFNB1P98172 346 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 CDK5Q00535 292 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 ZNF155Q12901 538 aaPredicted RBP9.64□□□□□ -0.87
SAMM50-206ENST00000494795 TMED1Q13445 227 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 ZNF267Q14586 743 aaPredicted RBP9.64□□□□□ -0.87
SAMM50-206ENST00000494795 INSL4Q14641 139 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 SNAPC1Q16533 368 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 PRTGQ2VWP7 1150 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 PLAG1Q6DJT9 500 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 SMARCD3Q6STE5 483 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 HSDL2Q6YN16 418 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 SLC46A3Q7Z3Q1 461 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 IGFN1Q86VF2 1251 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 GATSQ8NAP1 163 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 SLC38A4Q969I6 547 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 ZNF582Q96NG8 517 aaPredicted RBP9.64□□□□□ -0.87
SAMM50-206ENST00000494795 HCAR1Q9BXC0 346 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 PIGUQ9H490 435 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 ANKHQ9HCJ1 492 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 NECTIN3Q9NQS3 549 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 CLN6Q9NWW5 311 aa9.64□□□□□ -0.87
SAMM50-206ENST00000494795 M0R3G1 203 aa9.63□□□□□ -0.87
SAMM50-206ENST00000494795 AQP9O43315 295 aa9.63□□□□□ -0.87
SAMM50-206ENST00000494795 ASNA1O43681 348 aa9.63□□□□□ -0.87
SAMM50-206ENST00000494795 OR10H2O60403 315 aa9.63□□□□□ -0.87
SAMM50-206ENST00000494795 GPX5O75715 221 aa9.63□□□□□ -0.87
SAMM50-206ENST00000494795 KCNK2O95069 426 aa9.63□□□□□ -0.87
SAMM50-206ENST00000494795 CD46P15529 392 aa9.63□□□□□ -0.87
SAMM50-206ENST00000494795 ALAS2P22557 587 aa9.63□□□□□ -0.87
SAMM50-206ENST00000494795 MAP3K8P41279 467 aa9.63□□□□□ -0.87
SAMM50-206ENST00000494795 FNTBP49356 437 aa9.63□□□□□ -0.87
SAMM50-206ENST00000494795 GAS1P54826 345 aa9.63□□□□□ -0.87
SAMM50-206ENST00000494795 MADCAM1Q13477 382 aa9.63□□□□□ -0.87
SAMM50-206ENST00000494795 ATP1A4Q13733 1029 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms