RNA–Protein interactions for RNA: ENST00000494742.5

PCCB-219, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 547 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-219ENST00000494742 ZNF763Q0D2J5 394 aa13.11□□□□□ -0.31
PCCB-219ENST00000494742 STX5Q13190 355 aa13.11□□□□□ -0.31
PCCB-219ENST00000494742 ETFDHQ16134 617 aa13.11□□□□□ -0.31
PCCB-219ENST00000494742 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.11□□□□□ -0.31
PCCB-219ENST00000494742 EXOC3L2Q2M3D2 409 aa13.11□□□□□ -0.31
PCCB-219ENST00000494742 LGSNQ5TDP6 509 aa13.11□□□□□ -0.31
PCCB-219ENST00000494742 MARCH3Q86UD3 253 aa13.11□□□□□ -0.31
PCCB-219ENST00000494742 WDR75Q8IWA0 830 aaKnown RBP13.11□□□□□ -0.31
PCCB-219ENST00000494742 OR5M1Q8NGP8 315 aa13.11□□□□□ -0.31
PCCB-219ENST00000494742 DCAKDQ8WVC6 231 aa13.11□□□□□ -0.31
PCCB-219ENST00000494742 TBL1XR1Q9BZK7 514 aa13.11□□□□□ -0.31
PCCB-219ENST00000494742 CDC42EP4Q9H3Q1 356 aaKnown RBP13.11□□□□□ -0.31
PCCB-219ENST00000494742 MIEF1Q9NQG6 463 aa13.11□□□□□ -0.31
PCCB-219ENST00000494742 DDX18Q9NVP1 670 aaKnown RBP13.11□□□□□ -0.31
PCCB-219ENST00000494742 FLRT3Q9NZU0 649 aa13.11□□□□□ -0.31
PCCB-219ENST00000494742 DMGDHQ9UI17 866 aaKnown RBP13.11□□□□□ -0.31
PCCB-219ENST00000494742 ADAM21Q9UKJ8 722 aa13.11□□□□□ -0.31
PCCB-219ENST00000494742 MCTS1Q9ULC4 181 aaKnown RBP13.11□□□□□ -0.31
PCCB-219ENST00000494742 GPR52Q9Y2T5 361 aa13.11□□□□□ -0.31
PCCB-219ENST00000494742 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.11□□□□□ -0.31
PCCB-219ENST00000494742 C7orf72A4D263 438 aa13.1□□□□□ -0.31
PCCB-219ENST00000494742 EIF1AYO14602 144 aaKnown RBP13.1□□□□□ -0.31
PCCB-219ENST00000494742 SOX30O94993 753 aa13.1□□□□□ -0.31
PCCB-219ENST00000494742 KCNH1O95259 989 aa13.1□□□□□ -0.31
PCCB-219ENST00000494742 ANGPTL1O95841 491 aa13.1□□□□□ -0.31
PCCB-219ENST00000494742 SNRPAP09012 282 aaKnown RBP13.1□□□□□ -0.31
PCCB-219ENST00000494742 ATP5F1P24539 256 aaPredicted RBP13.1□□□□□ -0.31
PCCB-219ENST00000494742 NTSP30990 170 aa13.1□□□□□ -0.31
PCCB-219ENST00000494742 EIF1AXP47813 144 aaKnown RBP13.1□□□□□ -0.31
PCCB-219ENST00000494742 ATP5J2P56134 94 aa13.1□□□□□ -0.31
PCCB-219ENST00000494742 ETF1P62495 437 aaKnown RBP13.1□□□□□ -0.31
PCCB-219ENST00000494742 C2orf80Q0P641 193 aa13.1□□□□□ -0.31
PCCB-219ENST00000494742 LCP2Q13094 533 aa13.1□□□□□ -0.31
PCCB-219ENST00000494742 CAPRIN1Q14444 709 aaKnown RBP13.1□□□□□ -0.31
PCCB-219ENST00000494742 TEX35Q5T0J7 233 aa13.1□□□□□ -0.31
PCCB-219ENST00000494742 UBAP2Q5T6F2 1119 aaKnown RBP13.1□□□□□ -0.31
PCCB-219ENST00000494742 ADAM5Q6NVV9 412 aa13.1□□□□□ -0.31
PCCB-219ENST00000494742 TMEM107Q6UX40 140 aa13.1□□□□□ -0.31
PCCB-219ENST00000494742 STK32CQ86UX6 486 aa13.1□□□□□ -0.31
PCCB-219ENST00000494742 EXOC3L1Q86VI1 746 aa13.1□□□□□ -0.31
PCCB-219ENST00000494742 SLC22A9Q8IVM8 553 aa13.1□□□□□ -0.31
PCCB-219ENST00000494742 FAM76AQ8TAV0 307 aa13.1□□□□□ -0.31
PCCB-219ENST00000494742 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.1□□□□□ -0.31
PCCB-219ENST00000494742 ELP4Q96EB1 424 aa13.1□□□□□ -0.31
PCCB-219ENST00000494742 L3HYPDHQ96EM0 354 aa13.1□□□□□ -0.31
PCCB-219ENST00000494742 TMEM237Q96Q45 408 aa13.1□□□□□ -0.31
PCCB-219ENST00000494742 COL6A5A8TX70 2615 aa13.1□□□□□ -0.31
PCCB-219ENST00000494742 CHD3Q12873 2000 aaKnown RBP13.1□□□□□ -0.31
PCCB-219ENST00000494742 ESPNB1AK53 854 aa13.09□□□□□ -0.31
PCCB-219ENST00000494742 POC1B-GALNT4F8VUJ3 575 aa13.09□□□□□ -0.31
PCCB-219ENST00000494742 ADAMDEC1O15204 470 aa13.09□□□□□ -0.31
PCCB-219ENST00000494742 DLX3O60479 287 aa13.09□□□□□ -0.31
PCCB-219ENST00000494742 UTS2O95399 124 aa13.09□□□□□ -0.31
PCCB-219ENST00000494742 NGFRP08138 427 aa13.09□□□□□ -0.31
PCCB-219ENST00000494742 PSMB1P20618 241 aaKnown RBP13.09□□□□□ -0.31
PCCB-219ENST00000494742 SLC6A8P48029 635 aa13.09□□□□□ -0.31
PCCB-219ENST00000494742 HTR6P50406 440 aa13.09□□□□□ -0.31
PCCB-219ENST00000494742 PRKAA2P54646 552 aa13.09□□□□□ -0.31
PCCB-219ENST00000494742 CKAP4Q07065 602 aaKnown RBP13.09□□□□□ -0.31
PCCB-219ENST00000494742 SPDYAQ5MJ70 313 aa13.09□□□□□ -0.31
PCCB-219ENST00000494742 GTF2IRD2BQ6EKJ0 949 aa13.09□□□□□ -0.31
PCCB-219ENST00000494742 FAM71E1Q6IPT2 247 aa13.09□□□□□ -0.31
PCCB-219ENST00000494742 HEPHL1Q6MZM0 1159 aa13.09□□□□□ -0.31
PCCB-219ENST00000494742 TIFABQ6ZNK6 161 aa13.09□□□□□ -0.31
PCCB-219ENST00000494742 IKBIPQ70UQ0 350 aa13.09□□□□□ -0.31
PCCB-219ENST00000494742 GTF2IRD2Q86UP8 949 aa13.09□□□□□ -0.31
PCCB-219ENST00000494742 GTPBP8Q8N3Z3 284 aaPredicted RBP13.09□□□□□ -0.31
PCCB-219ENST00000494742 OR10D3Q8NH80 312 aa13.09□□□□□ -0.31
PCCB-219ENST00000494742 HOXB13Q92826 284 aaPredicted RBP13.09□□□□□ -0.31
PCCB-219ENST00000494742 ZBTB8AQ96BR9 441 aa13.09□□□□□ -0.31
PCCB-219ENST00000494742 PLPPR2Q96GM1 343 aa13.09□□□□□ -0.31
PCCB-219ENST00000494742 ADGRG7Q96K78 797 aa13.09□□□□□ -0.31
PCCB-219ENST00000494742 AMDHD1Q96NU7 426 aa13.09□□□□□ -0.31
PCCB-219ENST00000494742 HDHD5Q9BXW7 423 aa13.09□□□□□ -0.31
PCCB-219ENST00000494742 EBPLQ9BY08 206 aa13.09□□□□□ -0.31
PCCB-219ENST00000494742 ACTR6Q9GZN1 396 aa13.09□□□□□ -0.31
PCCB-219ENST00000494742 GLIPR2Q9H4G4 154 aa13.09□□□□□ -0.31
PCCB-219ENST00000494742 MYNNQ9NPC7 610 aa13.09□□□□□ -0.31
PCCB-219ENST00000494742 A0A087WUV0 522 aaPredicted RBP13.08□□□□□ -0.32
PCCB-219ENST00000494742 ALG1L2C9J202 215 aa13.08□□□□□ -0.32
PCCB-219ENST00000494742 H3BQF6 201 aa13.08□□□□□ -0.32
PCCB-219ENST00000494742 SYNGR4O95473 234 aa13.08□□□□□ -0.32
PCCB-219ENST00000494742 LCN1P31025 176 aa13.08□□□□□ -0.32
PCCB-219ENST00000494742 RPS4XP62701 263 aaKnown RBP13.08□□□□□ -0.32
PCCB-219ENST00000494742 RAC1P63000 192 aa13.08□□□□□ -0.32
PCCB-219ENST00000494742 BTKQ06187 659 aa13.08□□□□□ -0.32
PCCB-219ENST00000494742 TNK1Q13470 666 aa13.08□□□□□ -0.32
PCCB-219ENST00000494742 CTU2Q2VPK5 515 aaKnown RBP13.08□□□□□ -0.32
PCCB-219ENST00000494742 VPS26BQ4G0F5 336 aa13.08□□□□□ -0.32
PCCB-219ENST00000494742 FAM219BQ5XKK7 198 aa13.08□□□□□ -0.32
PCCB-219ENST00000494742 APOOLQ6UXV4 268 aa13.08□□□□□ -0.32
PCCB-219ENST00000494742 ESPNLQ6ZVH7 1005 aa13.08□□□□□ -0.32
PCCB-219ENST00000494742 CNPY4Q8N129 248 aa13.08□□□□□ -0.32
PCCB-219ENST00000494742 MMGT1Q8N4V1 131 aa13.08□□□□□ -0.32
PCCB-219ENST00000494742 STEAP2Q8NFT2 490 aa13.08□□□□□ -0.32
PCCB-219ENST00000494742 ACTRT2Q8TDY3 377 aa13.08□□□□□ -0.32
PCCB-219ENST00000494742 TRMT61AQ96FX7 289 aaKnown RBP13.08□□□□□ -0.32
PCCB-219ENST00000494742 METTL2AQ96IZ6 378 aaKnown RBP13.08□□□□□ -0.32
PCCB-219ENST00000494742 FMO2Q99518 471 aa13.08□□□□□ -0.32
PCCB-219ENST00000494742 USB1Q9BQ65 265 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms