RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 FBXO15Q8NCQ5 510 aaPredicted RBP4.5□□□□□ -1.69
PRKD3-210ENST00000494667 B3GALNT2Q8NCR0 500 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 TCTEX1D2Q8WW35 142 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 TSNAXQ99598 290 aaKnown RBP4.5□□□□□ -1.69
PRKD3-210ENST00000494667 MRI1Q9BV20 369 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 INPP5EQ9NRR6 644 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 FZD4Q9ULV1 537 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 CLCA2Q9UQC9 943 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 YARS2Q9Y2Z4 477 aaKnown RBP4.5□□□□□ -1.69
PRKD3-210ENST00000494667 F8VVB4 439 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 F8VWA3 439 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 PRRG1O14668 218 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 SCAMP2O15127 329 aaKnown RBP4.5□□□□□ -1.69
PRKD3-210ENST00000494667 BCL2L11O43521 198 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 WNT1P04628 370 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 OR8U8P0C7N1 319 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 GKN3PP0CG01 181 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 CBSLP0DN79 551 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 KCNE1P15382 129 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 ZNF44P15621 663 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 HLA-GP17693 338 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 ELAVL4P26378 380 aaKnown RBP4.5□□□□□ -1.69
PRKD3-210ENST00000494667 CBSP35520 551 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 ASMTP46597 345 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 DGKGP49619 791 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 RBP2P50120 134 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 XKP51811 444 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 GMFBP60983 142 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 DEFA6Q01524 100 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 TNFRSF17Q02223 184 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 TIGD5Q53EQ6 642 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 METTL23Q86XA0 190 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 EEF1AKMT1Q8WVE0 214 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 CDK15Q96Q40 435 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 CRB3Q9BUF7 120 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 SORBS1Q9BX66 1292 aaKnown RBP4.5□□□□□ -1.69
PRKD3-210ENST00000494667 BHLHE41Q9C0J9 482 aaPredicted RBP4.5□□□□□ -1.69
PRKD3-210ENST00000494667 HRASLSQ9HDD0 168 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 ACSS1Q9NUB1 689 aaPredicted RBP4.5□□□□□ -1.69
PRKD3-210ENST00000494667 TMEM248Q9NWD8 314 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 TEX10Q9NXF1 929 aaPredicted RBP4.5□□□□□ -1.69
PRKD3-210ENST00000494667 OR6C2Q9NZP2 312 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 DNAJC27Q9NZQ0 273 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 GHRLQ9UBU3 117 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 USP21Q9UK80 565 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 NUP205Q92621 2012 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 A0A1W2PRQ8 180 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 C2orf78A6NCI8 922 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 OR51F1A6NGY5 319 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 C1orf196B1AJZ1 125 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 GABARAPH6UMI1 98 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 M0R129 80 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 GPR31O00270 319 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 FFAR1O14842 300 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 IRAK2O43187 625 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 TSPAN3O60637 253 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 SH3BGRLO75368 114 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 C22orf31O95567 290 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 MT-ND4LP03901 98 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 ZNF806P0C7X5 589 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 GSTM3P21266 225 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 ITGA3P26006 1051 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 CFPP27918 469 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 HTR2AP28223 471 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 LHX1P48742 406 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 FOXO1Q12778 655 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 ILF3Q12906 894 aaKnown RBP eCLIP4.5□□□□□ -1.69
PRKD3-210ENST00000494667 SNTB2Q13425 540 aaKnown RBP4.5□□□□□ -1.69
PRKD3-210ENST00000494667 CSRP2Q16527 193 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 NKAPLQ5M9Q1 402 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 JMJD6Q6NYC1 403 aaPredicted RBP4.5□□□□□ -1.69
PRKD3-210ENST00000494667 LPCAT3Q6P1A2 487 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 RBMS3Q6XE24 437 aaKnown RBP4.5□□□□□ -1.69
PRKD3-210ENST00000494667 LDB1Q86U70 411 aaPredicted RBP4.5□□□□□ -1.69
PRKD3-210ENST00000494667 SPNS2Q8IVW8 549 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 RYBPQ8N488 228 aaPredicted RBP4.5□□□□□ -1.69
PRKD3-210ENST00000494667 ARRDC1Q8N5I2 433 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 PNLDC1Q8NA58 520 aaKnown RBP4.5□□□□□ -1.69
PRKD3-210ENST00000494667 BEST4Q8NFU0 473 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 PANX1Q96RD7 426 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 DUSP26Q9BV47 211 aa4.5□□□□□ -1.69
PRKD3-210ENST00000494667 SPRTNQ9H040 489 aaPredicted RBP4.5□□□□□ -1.69
PRKD3-210ENST00000494667 ANAPC1Q9H1A4 1944 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 A0A1B0GTI1 187 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 WASH3PC4AMC7 463 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 RNF13O43567 381 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 PLPP2O43688 288 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 PEX10O60683 326 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 CLDN9O95484 217 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 SYPP08247 313 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 CBR1P16152 277 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 ABCD3P28288 659 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 ADORA2BP29275 332 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 MAPK9P45984 424 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 PSMA6P60900 246 aaKnown RBP4.49□□□□□ -1.69
PRKD3-210ENST00000494667 SNRPEP62304 92 aaKnown RBP4.49□□□□□ -1.69
PRKD3-210ENST00000494667 CRHR2Q13324 411 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 PDE7AQ13946 482 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 PEA15Q15121 130 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 PTPRRQ15256 657 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms