RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 FBXL19-AS1Q494R0 122 aa8.67□□□□□ -1.02
MSH5-218ENST00000494646 ADGRE4PQ86SQ3 457 aa8.67□□□□□ -1.02
MSH5-218ENST00000494646 CDC20BQ86Y33 519 aa8.67□□□□□ -1.02
MSH5-218ENST00000494646 KIF18BQ86Y91 864 aa8.67□□□□□ -1.02
MSH5-218ENST00000494646 RIBC1Q8N443 379 aaPredicted RBP8.67□□□□□ -1.02
MSH5-218ENST00000494646 CNEP1R1Q8N9A8 125 aa8.67□□□□□ -1.02
MSH5-218ENST00000494646 ZNF454Q8N9F8 522 aa8.67□□□□□ -1.02
MSH5-218ENST00000494646 GATSQ8NAP1 163 aa8.67□□□□□ -1.02
MSH5-218ENST00000494646 SLC16A11Q8NCK7 471 aa8.67□□□□□ -1.02
MSH5-218ENST00000494646 OR7A2PQ8NGA2 310 aa8.67□□□□□ -1.02
MSH5-218ENST00000494646 OR4C3Q8NH37 302 aa8.67□□□□□ -1.02
MSH5-218ENST00000494646 ZFP28Q8NHY6 868 aa8.67□□□□□ -1.02
MSH5-218ENST00000494646 FAM222BQ8WU58 562 aa8.67□□□□□ -1.02
MSH5-218ENST00000494646 FIG4Q92562 907 aa8.67□□□□□ -1.02
MSH5-218ENST00000494646 GIMAP5Q96F15 307 aa8.67□□□□□ -1.02
MSH5-218ENST00000494646 FCRL1Q96LA6 429 aa8.67□□□□□ -1.02
MSH5-218ENST00000494646 C1orf50Q9BV19 199 aa8.67□□□□□ -1.02
MSH5-218ENST00000494646 TBL1XR1Q9BZK7 514 aa8.67□□□□□ -1.02
MSH5-218ENST00000494646 ROPN1BQ9BZX4 212 aaPredicted RBP8.67□□□□□ -1.02
MSH5-218ENST00000494646 PTGES2Q9H7Z7 377 aa8.67□□□□□ -1.02
MSH5-218ENST00000494646 ROPN1Q9HAT0 212 aaPredicted RBP8.67□□□□□ -1.02
MSH5-218ENST00000494646 FAM120CQ9NX05 1096 aaKnown RBP8.67□□□□□ -1.02
MSH5-218ENST00000494646 JKAMPQ9P055 326 aa8.67□□□□□ -1.02
MSH5-218ENST00000494646 CLCF1Q9UBD9 225 aa8.67□□□□□ -1.02
MSH5-218ENST00000494646 FOXD3Q9UJU5 478 aaPredicted RBP8.67□□□□□ -1.02
MSH5-218ENST00000494646 VDAC3Q9Y277 283 aa8.67□□□□□ -1.02
MSH5-218ENST00000494646 A0A1W2PRB8 838 aa8.66□□□□□ -1.02
MSH5-218ENST00000494646 FAM221AA4D161 298 aa8.66□□□□□ -1.02
MSH5-218ENST00000494646 TBX19O60806 448 aa8.66□□□□□ -1.02
MSH5-218ENST00000494646 SKAP2O75563 359 aaPredicted RBP8.66□□□□□ -1.02
MSH5-218ENST00000494646 SMNDC1O75940 238 aaKnown RBP eCLIP8.66□□□□□ -1.02
MSH5-218ENST00000494646 KCNK2O95069 426 aa8.66□□□□□ -1.02
MSH5-218ENST00000494646 BPGMP07738 259 aa8.66□□□□□ -1.02
MSH5-218ENST00000494646 LAMP1P11279 417 aa8.66□□□□□ -1.02
MSH5-218ENST00000494646 NEFHP12036 1026 aa8.66□□□□□ -1.02
MSH5-218ENST00000494646 ARRB2P32121 409 aa8.66□□□□□ -1.02
MSH5-218ENST00000494646 PEX19P40855 299 aa8.66□□□□□ -1.02
MSH5-218ENST00000494646 MAP3K8P41279 467 aa8.66□□□□□ -1.02
MSH5-218ENST00000494646 ASMTP46597 345 aa8.66□□□□□ -1.02
MSH5-218ENST00000494646 RNF144AP50876 292 aaPredicted RBP8.66□□□□□ -1.02
MSH5-218ENST00000494646 CLDN20P56880 219 aa8.66□□□□□ -1.02
MSH5-218ENST00000494646 SIRPAP78324 504 aa8.66□□□□□ -1.02
MSH5-218ENST00000494646 FAM27E3Q08E93 113 aa8.66□□□□□ -1.02
MSH5-218ENST00000494646 DAZAP2Q15038 168 aaPredicted RBP8.66□□□□□ -1.02
MSH5-218ENST00000494646 POU4F3Q15319 338 aa8.66□□□□□ -1.02
MSH5-218ENST00000494646 BCL2A1Q16548 175 aa8.66□□□□□ -1.02
MSH5-218ENST00000494646 DUSP5Q16690 384 aa8.66□□□□□ -1.02
MSH5-218ENST00000494646 C6orf136Q5SQH8 315 aa8.66□□□□□ -1.02
MSH5-218ENST00000494646 CCNJQ5T5M9 372 aa8.66□□□□□ -1.02
MSH5-218ENST00000494646 IL23RQ5VWK5 629 aa8.66□□□□□ -1.02
MSH5-218ENST00000494646 PPP4R4Q6NUP7 873 aa8.66□□□□□ -1.02
MSH5-218ENST00000494646 R3HCC1LQ7Z5L2 792 aaKnown RBP8.66□□□□□ -1.02
MSH5-218ENST00000494646 ZAR1Q86SH2 424 aa8.66□□□□□ -1.02
MSH5-218ENST00000494646 NUDCD3Q8IVD9 361 aa8.66□□□□□ -1.02
MSH5-218ENST00000494646 MEIOBQ8N635 442 aa8.66□□□□□ -1.02
MSH5-218ENST00000494646 KRTCAP2Q8N6L1 136 aa8.66□□□□□ -1.02
MSH5-218ENST00000494646 CDRT4Q8N9R6 151 aa8.66□□□□□ -1.02
MSH5-218ENST00000494646 AENQ8WTP8 325 aaKnown RBP8.66□□□□□ -1.02
MSH5-218ENST00000494646 JADE3Q92613 823 aa8.66□□□□□ -1.02
MSH5-218ENST00000494646 STARD4Q96DR4 205 aa8.66□□□□□ -1.02
MSH5-218ENST00000494646 C1GALT1C1Q96EU7 318 aa8.66□□□□□ -1.02
MSH5-218ENST00000494646 DTNBP1Q96EV8 351 aa8.66□□□□□ -1.02
MSH5-218ENST00000494646 ZBED6CLQ96FA7 236 aaPredicted RBP8.66□□□□□ -1.02
MSH5-218ENST00000494646 CHMP6Q96FZ7 201 aa8.66□□□□□ -1.02
MSH5-218ENST00000494646 SH3YL1Q96HL8 342 aaPredicted RBP8.66□□□□□ -1.02
MSH5-218ENST00000494646 ZNF845Q96IR2 970 aaPredicted RBP8.66□□□□□ -1.02
MSH5-218ENST00000494646 PPP1R36Q96LQ0 422 aa8.66□□□□□ -1.02
MSH5-218ENST00000494646 PPP3R2Q96LZ3 170 aa8.66□□□□□ -1.02
MSH5-218ENST00000494646 NPAS1Q99742 590 aa8.66□□□□□ -1.02
MSH5-218ENST00000494646 CCT7Q99832 543 aa8.66□□□□□ -1.02
MSH5-218ENST00000494646 PINK1Q9BXM7 581 aa8.66□□□□□ -1.02
MSH5-218ENST00000494646 ZNF395Q9H8N7 513 aaPredicted RBP8.66□□□□□ -1.02
MSH5-218ENST00000494646 MKS1Q9NXB0 559 aa8.66□□□□□ -1.02
MSH5-218ENST00000494646 GALNT8Q9NY28 637 aa8.66□□□□□ -1.02
MSH5-218ENST00000494646 LGALS13Q9UHV8 139 aa8.66□□□□□ -1.02
MSH5-218ENST00000494646 ST6GALNAC2Q9UJ37 374 aa8.66□□□□□ -1.02
MSH5-218ENST00000494646 PLEKHA6Q9Y2H5 1048 aa8.66□□□□□ -1.02
MSH5-218ENST00000494646 TMED5Q9Y3A6 229 aa8.66□□□□□ -1.02
MSH5-218ENST00000494646 SNX8Q9Y5X2 465 aa8.66□□□□□ -1.02
MSH5-218ENST00000494646 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.65□□□□□ -1.02
MSH5-218ENST00000494646 A0A1W2PNV4 684 aa8.65□□□□□ -1.02
MSH5-218ENST00000494646 SLC22A20A6NK97 555 aa8.65□□□□□ -1.02
MSH5-218ENST00000494646 A8MXE2 369 aa8.65□□□□□ -1.02
MSH5-218ENST00000494646 TMEM114B3SHH9 223 aa8.65□□□□□ -1.02
MSH5-218ENST00000494646 HCRTR2O43614 444 aa8.65□□□□□ -1.02
MSH5-218ENST00000494646 NDUFB5O43674 189 aa8.65□□□□□ -1.02
MSH5-218ENST00000494646 ITM2AO43736 263 aa8.65□□□□□ -1.02
MSH5-218ENST00000494646 LYPLA1O75608 230 aaPredicted RBP8.65□□□□□ -1.02
MSH5-218ENST00000494646 TNFSF13O75888 250 aa8.65□□□□□ -1.02
MSH5-218ENST00000494646 OXSR1O95747 527 aaPredicted RBP8.65□□□□□ -1.02
MSH5-218ENST00000494646 HMGN2P05204 90 aaKnown RBP8.65□□□□□ -1.02
MSH5-218ENST00000494646 ALOX5P09917 674 aa8.65□□□□□ -1.02
MSH5-218ENST00000494646 CPOXP36551 454 aa8.65□□□□□ -1.02
MSH5-218ENST00000494646 FRKP42685 505 aaPredicted RBP8.65□□□□□ -1.02
MSH5-218ENST00000494646 SERPINB4P48594 390 aa8.65□□□□□ -1.02
MSH5-218ENST00000494646 EEFSECP57772 596 aaKnown RBP8.65□□□□□ -1.02
MSH5-218ENST00000494646 PRR5P85299 388 aa8.65□□□□□ -1.02
MSH5-218ENST00000494646 PDE7AQ13946 482 aa8.65□□□□□ -1.02
MSH5-218ENST00000494646 LASP1Q14847 261 aaKnown RBP8.65□□□□□ -1.02
MSH5-218ENST00000494646 PTGR1Q14914 329 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms