RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 TMEM71Q6P5X7 295 aa15.33■□□□□ 0.04
ATG4B-225ENST00000494465 P3H2Q8IVL5 708 aa15.33■□□□□ 0.04
ATG4B-225ENST00000494465 NKAIN4Q8IVV8 208 aa15.33■□□□□ 0.04
ATG4B-225ENST00000494465 C16orf52Q8NHV5 167 aa15.33■□□□□ 0.04
ATG4B-225ENST00000494465 IPCEF1Q8WWN9 437 aaPredicted RBP15.33■□□□□ 0.04
ATG4B-225ENST00000494465 ZNF578Q96N58 590 aaPredicted RBP15.33■□□□□ 0.04
ATG4B-225ENST00000494465 CNPPD1Q9BV87 410 aa15.33■□□□□ 0.04
ATG4B-225ENST00000494465 LIN28AQ9H9Z2 209 aaKnown RBP15.33■□□□□ 0.04
ATG4B-225ENST00000494465 IMPAD1Q9NX62 359 aa15.33■□□□□ 0.04
ATG4B-225ENST00000494465 PSORS1C1Q9UIG5 152 aa15.33■□□□□ 0.04
ATG4B-225ENST00000494465 GMEB2Q9UKD1 530 aa15.33■□□□□ 0.04
ATG4B-225ENST00000494465 PRAMEF2O60811 474 aa15.32■□□□□ 0.04
ATG4B-225ENST00000494465 INMTO95050 263 aa15.32■□□□□ 0.04
ATG4B-225ENST00000494465 OR5F1O95221 314 aa15.32■□□□□ 0.04
ATG4B-225ENST00000494465 MT-ND2P03891 347 aa15.32■□□□□ 0.04
ATG4B-225ENST00000494465 ACVR2AP27037 513 aa15.32■□□□□ 0.04
ATG4B-225ENST00000494465 PGDP52209 483 aa15.32■□□□□ 0.04
ATG4B-225ENST00000494465 GP2P55259 537 aaKnown RBP15.32■□□□□ 0.04
ATG4B-225ENST00000494465 CDC42P60953 191 aa15.32■□□□□ 0.04
ATG4B-225ENST00000494465 TUBA3CQ13748 450 aa15.32■□□□□ 0.04
ATG4B-225ENST00000494465 ZNHIT3Q15649 155 aaPredicted RBP15.32■□□□□ 0.04
ATG4B-225ENST00000494465 C12orf73Q69YU5 71 aa15.32■□□□□ 0.04
ATG4B-225ENST00000494465 PLEKHM3Q6ZWE6 761 aa15.32■□□□□ 0.04
ATG4B-225ENST00000494465 AHSA2Q719I0 299 aa15.32■□□□□ 0.04
ATG4B-225ENST00000494465 PRICKLE2Q7Z3G6 844 aa15.32■□□□□ 0.04
ATG4B-225ENST00000494465 MEX3DQ86XN8 651 aaKnown RBP15.32■□□□□ 0.04
ATG4B-225ENST00000494465 ZNF420Q8TAQ5 688 aaPredicted RBP15.32■□□□□ 0.04
ATG4B-225ENST00000494465 FKBP10Q96AY3 582 aa15.32■□□□□ 0.04
ATG4B-225ENST00000494465 C12orf43Q96C57 262 aaKnown RBP15.32■□□□□ 0.04
ATG4B-225ENST00000494465 OR1F2PQ96R84 312 aa15.32■□□□□ 0.04
ATG4B-225ENST00000494465 OR10A5Q9H207 317 aa15.32■□□□□ 0.04
ATG4B-225ENST00000494465 CCNB1IP1Q9NPC3 277 aa15.32■□□□□ 0.04
ATG4B-225ENST00000494465 C11orf16Q9NQ32 467 aa15.32■□□□□ 0.04
ATG4B-225ENST00000494465 FGF21Q9NSA1 209 aa15.32■□□□□ 0.04
ATG4B-225ENST00000494465 IGKV3D-11A0A0A0MRZ8 115 aa15.32■□□□□ 0.04
ATG4B-225ENST00000494465 RGS10O43665 173 aa15.32■□□□□ 0.04
ATG4B-225ENST00000494465 MRPS14O60783 128 aaKnown RBP15.32■□□□□ 0.04
ATG4B-225ENST00000494465 IFNA16P05015 189 aa15.32■□□□□ 0.04
ATG4B-225ENST00000494465 GKN3PP0CG01 181 aa15.32■□□□□ 0.04
ATG4B-225ENST00000494465 HTR2AP28223 471 aa15.32■□□□□ 0.04
ATG4B-225ENST00000494465 MAP2K4P45985 399 aa15.32■□□□□ 0.04
ATG4B-225ENST00000494465 DSG2Q14126 1118 aa15.32■□□□□ 0.04
ATG4B-225ENST00000494465 PRSS48Q7RTY5 328 aa15.32■□□□□ 0.04
ATG4B-225ENST00000494465 GPR135Q8IZ08 494 aa15.32■□□□□ 0.04
ATG4B-225ENST00000494465 ZSCAN1Q8NBB4 408 aa15.32■□□□□ 0.04
ATG4B-225ENST00000494465 RCBTB1Q8NDN9 531 aa15.32■□□□□ 0.04
ATG4B-225ENST00000494465 PTPMT1Q8WUK0 201 aaPredicted RBP15.32■□□□□ 0.04
ATG4B-225ENST00000494465 SLC41A3Q96GZ6 507 aa15.32■□□□□ 0.04
ATG4B-225ENST00000494465 PTCHD1Q96NR3 888 aa15.32■□□□□ 0.04
ATG4B-225ENST00000494465 NDC1Q9BTX1 674 aa15.32■□□□□ 0.04
ATG4B-225ENST00000494465 AMBNQ9NP70 447 aa15.32■□□□□ 0.04
ATG4B-225ENST00000494465 MMACHCQ9Y4U1 282 aa15.32■□□□□ 0.04
ATG4B-225ENST00000494465 A0A1W2PQM1 296 aa15.31■□□□□ 0.04
ATG4B-225ENST00000494465 CPED1A4D0V7 1026 aa15.31■□□□□ 0.04
ATG4B-225ENST00000494465 DSCR3O14972 297 aa15.31■□□□□ 0.04
ATG4B-225ENST00000494465 OMPP47874 163 aa15.31■□□□□ 0.04
ATG4B-225ENST00000494465 NUDT6P53370 316 aa15.31■□□□□ 0.04
ATG4B-225ENST00000494465 BIKQ13323 160 aa15.31■□□□□ 0.04
ATG4B-225ENST00000494465 DECR1Q16698 335 aa15.31■□□□□ 0.04
ATG4B-225ENST00000494465 FLYWCH1Q4VC44 716 aa15.31■□□□□ 0.04
ATG4B-225ENST00000494465 KIF18BQ86Y91 864 aa15.31■□□□□ 0.04
ATG4B-225ENST00000494465 GALNT15Q8N3T1 639 aa15.31■□□□□ 0.04
ATG4B-225ENST00000494465 FAM181AQ8N9Y4 354 aa15.31■□□□□ 0.04
ATG4B-225ENST00000494465 GGHQ92820 318 aa15.31■□□□□ 0.04
ATG4B-225ENST00000494465 ZC3H10Q96K80 434 aaKnown RBP15.31■□□□□ 0.04
ATG4B-225ENST00000494465 PELOQ9BRX2 385 aaKnown RBP15.31■□□□□ 0.04
ATG4B-225ENST00000494465 GAREM1Q9H706 876 aa15.31■□□□□ 0.04
ATG4B-225ENST00000494465 SERTAD3Q9UJW9 196 aa15.31■□□□□ 0.04
ATG4B-225ENST00000494465 ENO4A6NNW6 628 aa15.31■□□□□ 0.04
ATG4B-225ENST00000494465 H3BMQ9 156 aa15.31■□□□□ 0.04
ATG4B-225ENST00000494465 H3BN98 237 aa15.31■□□□□ 0.04
ATG4B-225ENST00000494465 TOX3O15405 576 aaPredicted RBP15.31■□□□□ 0.04
ATG4B-225ENST00000494465 AHCYL1O43865 530 aa15.31■□□□□ 0.04
ATG4B-225ENST00000494465 CFIP05156 583 aa15.31■□□□□ 0.04
ATG4B-225ENST00000494465 QSOX2Q6ZRP7 698 aa15.31■□□□□ 0.04
ATG4B-225ENST00000494465 ARHGAP22Q7Z5H3 698 aa15.31■□□□□ 0.04
ATG4B-225ENST00000494465 LSRQ86X29 649 aaPredicted RBP15.31■□□□□ 0.04
ATG4B-225ENST00000494465 ACOT11Q8WXI4 607 aaPredicted RBP15.31■□□□□ 0.04
ATG4B-225ENST00000494465 TSLPQ969D9 159 aa15.31■□□□□ 0.04
ATG4B-225ENST00000494465 MPP4Q96JB8 637 aa15.31■□□□□ 0.04
ATG4B-225ENST00000494465 COG8Q96MW5 612 aa15.31■□□□□ 0.04
ATG4B-225ENST00000494465 PRSS27Q9BQR3 290 aa15.31■□□□□ 0.04
ATG4B-225ENST00000494465 YIPF2Q9BWQ6 316 aa15.31■□□□□ 0.04
ATG4B-225ENST00000494465 COL5A1P20908 1838 aaPredicted RBP15.3■□□□□ 0.04
ATG4B-225ENST00000494465 WDFY4Q6ZS81 3184 aa15.3■□□□□ 0.04
ATG4B-225ENST00000494465 TRIM64BA6NI03 449 aa15.3■□□□□ 0.04
ATG4B-225ENST00000494465 CLCA1A8K7I4 914 aa15.3■□□□□ 0.04
ATG4B-225ENST00000494465 PATE3B3GLJ2 98 aa15.3■□□□□ 0.04
ATG4B-225ENST00000494465 NPIPB9F8W1W9 429 aa15.3■□□□□ 0.04
ATG4B-225ENST00000494465 TRMUO75648 421 aaKnown RBP15.3■□□□□ 0.04
ATG4B-225ENST00000494465 LYPD3O95274 346 aa15.3■□□□□ 0.04
ATG4B-225ENST00000494465 TNNI3P19429 210 aa15.3■□□□□ 0.04
ATG4B-225ENST00000494465 DRD5P21918 477 aa15.3■□□□□ 0.04
ATG4B-225ENST00000494465 RFX3P48380 749 aa15.3■□□□□ 0.04
ATG4B-225ENST00000494465 MVKQ03426 396 aa15.3■□□□□ 0.04
ATG4B-225ENST00000494465 PDZK1Q5T2W1 519 aa15.3■□□□□ 0.04
ATG4B-225ENST00000494465 ZNF730Q6ZMV8 503 aa15.3■□□□□ 0.04
ATG4B-225ENST00000494465 OR2I1PQ8NGU4 316 aa15.3■□□□□ 0.04
ATG4B-225ENST00000494465 TMEM255BQ8WV15 326 aa15.3■□□□□ 0.04
ATG4B-225ENST00000494465 COPS4Q9BT78 406 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms