RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 CDH24Q86UP0 819 aa7.6□□□□□ -1.19
HDAC6-234ENST00000493923 GPALPP1Q8IXQ4 340 aa7.6□□□□□ -1.19
HDAC6-234ENST00000493923 MICU2Q8IYU8 434 aa7.6□□□□□ -1.19
HDAC6-234ENST00000493923 ADGRG5Q8IZF4 528 aa7.6□□□□□ -1.19
HDAC6-234ENST00000493923 RNF148Q8N7C7 305 aa7.6□□□□□ -1.19
HDAC6-234ENST00000493923 OR56A3Q8NH54 315 aa7.6□□□□□ -1.19
HDAC6-234ENST00000493923 OR51Q1Q8NH59 317 aa7.6□□□□□ -1.19
HDAC6-234ENST00000493923 MAGEE2Q8TD90 523 aaPredicted RBP7.6□□□□□ -1.19
HDAC6-234ENST00000493923 IPCEF1Q8WWN9 437 aaPredicted RBP7.6□□□□□ -1.19
HDAC6-234ENST00000493923 SLC7A6Q92536 515 aa7.6□□□□□ -1.19
HDAC6-234ENST00000493923 TM9SF4Q92544 642 aa7.6□□□□□ -1.19
HDAC6-234ENST00000493923 RERGQ96A58 199 aaPredicted RBP7.6□□□□□ -1.19
HDAC6-234ENST00000493923 CCDC126Q96EE4 140 aa7.6□□□□□ -1.19
HDAC6-234ENST00000493923 MVB12AQ96EY5 273 aa7.6□□□□□ -1.19
HDAC6-234ENST00000493923 CERS2Q96G23 380 aa7.6□□□□□ -1.19
HDAC6-234ENST00000493923 MCMBPQ9BTE3 642 aa7.6□□□□□ -1.19
HDAC6-234ENST00000493923 TRIM54Q9BYV2 358 aa7.6□□□□□ -1.19
HDAC6-234ENST00000493923 PCDHAC1Q9H158 963 aa7.6□□□□□ -1.19
HDAC6-234ENST00000493923 KLHL31Q9H511 634 aa7.6□□□□□ -1.19
HDAC6-234ENST00000493923 EML4Q9HC35 981 aaKnown RBP7.6□□□□□ -1.19
HDAC6-234ENST00000493923 POLE4Q9NR33 117 aa7.6□□□□□ -1.19
HDAC6-234ENST00000493923 SMYD2Q9NRG4 433 aa7.6□□□□□ -1.19
HDAC6-234ENST00000493923 SNX15Q9NRS6 342 aa7.6□□□□□ -1.19
HDAC6-234ENST00000493923 C14orf105Q9NVL8 296 aa7.6□□□□□ -1.19
HDAC6-234ENST00000493923 OXSMQ9NWU1 459 aa7.6□□□□□ -1.19
HDAC6-234ENST00000493923 PHF11Q9UIL8 331 aa7.6□□□□□ -1.19
HDAC6-234ENST00000493923 PCDHGB6Q9Y5F9 930 aa7.6□□□□□ -1.19
HDAC6-234ENST00000493923 ORC6Q9Y5N6 252 aa7.6□□□□□ -1.19
HDAC6-234ENST00000493923 LYVE1Q9Y5Y7 322 aa7.6□□□□□ -1.19
HDAC6-234ENST00000493923 COMMD10Q9Y6G5 202 aa7.6□□□□□ -1.19
HDAC6-234ENST00000493923 ZNF407Q9C0G0 2248 aa7.6□□□□□ -1.19
HDAC6-234ENST00000493923 NCOA6Q14686 2063 aaPredicted RBP7.59□□□□□ -1.19
HDAC6-234ENST00000493923 OTOGQ6ZRI0 2925 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 DNAJC13O75165 2243 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 EML6Q6ZMW3 1958 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 HMX2A2RU54 273 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 NPEPPSL1A6NEC2 478 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 PRORSD1PA6NEY8 169 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 STX16-NPEPL1H3BU86 382 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 CDC7O00311 574 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 SLC1A7O00341 560 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 PCDH17O14917 1159 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 PRAMEF4O60810 478 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 OR5F1O95221 314 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 NSA2O95478 260 aaKnown RBP7.59□□□□□ -1.19
HDAC6-234ENST00000493923 GUCA1CO95843 209 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 ECDO95905 644 aaPredicted RBP7.59□□□□□ -1.19
HDAC6-234ENST00000493923 IFNA14P01570 189 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 ALDOAP04075 364 aaKnown RBP7.59□□□□□ -1.19
HDAC6-234ENST00000493923 C8orf89P0DMQ9 161 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 TFEBP19484 476 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 ATP6V1B2P21281 511 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 PCMT1P22061 227 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 GRNP28799 593 aaKnown RBP7.59□□□□□ -1.19
HDAC6-234ENST00000493923 PRKAR1BP31321 381 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 CLK1P49759 484 aaKnown RBP7.59□□□□□ -1.19
HDAC6-234ENST00000493923 SLC12A2P55011 1212 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 EEFSECP57772 596 aaKnown RBP7.59□□□□□ -1.19
HDAC6-234ENST00000493923 RPS15AP62244 130 aaKnown RBP7.59□□□□□ -1.19
HDAC6-234ENST00000493923 ARG2P78540 354 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 FLI1Q01543 452 aaPredicted RBP7.59□□□□□ -1.19
HDAC6-234ENST00000493923 HYAL2Q12891 473 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 LAPTM4AQ15012 233 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 PPP1R3AQ16821 1122 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 ADPRMQ3LIE5 342 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 MINDY4Q4G0A6 757 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 KLHL12Q53G59 568 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 FBXO48Q5FWF7 155 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 ZBTB37Q5TC79 503 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 PXDC1Q5TGL8 231 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 ZNF468Q5VIY5 522 aaPredicted RBP7.59□□□□□ -1.19
HDAC6-234ENST00000493923 PRAMEF9Q5VWM5 478 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 SULT1C3Q6IMI6 304 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 CAPN13Q6MZZ7 669 aaPredicted RBP7.59□□□□□ -1.19
HDAC6-234ENST00000493923 SHQ1Q6PI26 577 aaKnown RBP7.59□□□□□ -1.19
HDAC6-234ENST00000493923 LCTLQ6UWM7 567 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 CYP2R1Q6VVX0 501 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 CPEB2Q7Z5Q1 589 aaKnown RBP7.59□□□□□ -1.19
HDAC6-234ENST00000493923 ASPGQ86U10 573 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 ZBTB46Q86UZ6 589 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 FJX1Q86VR8 437 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 C17orf64Q86WR6 236 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 BEST3Q8N1M1 668 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 MFSD9Q8NBP5 474 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 CHDHQ8NE62 594 aaPredicted RBP7.59□□□□□ -1.19
HDAC6-234ENST00000493923 OR4K1Q8NGD4 311 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 OR5T2Q8NGG2 359 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 SLC13A3Q8WWT9 602 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 HAS2Q92819 552 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 NEIL2Q969S2 332 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 DACT3Q96B18 629 aaPredicted RBP7.59□□□□□ -1.19
HDAC6-234ENST00000493923 LGALS12Q96DT0 336 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 PEX11GQ96HA9 241 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 SCYL1Q96KG9 808 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 C5orf34Q96MH7 638 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 SIGLEC12Q96PQ1 595 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 RBM4BQ9BQ04 359 aaKnown RBP7.59□□□□□ -1.19
HDAC6-234ENST00000493923 RBM4Q9BWF3 364 aaKnown RBP7.59□□□□□ -1.19
HDAC6-234ENST00000493923 GATA5Q9BWX5 397 aaPredicted RBP7.59□□□□□ -1.19
HDAC6-234ENST00000493923 DGCR6LQ9BY27 220 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms