RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 AGAP7PQ5VUJ5 663 aa11.6□□□□□ -0.55
HMGN1-220ENST00000492280 CCBE1Q6UXH8 406 aaPredicted RBP11.6□□□□□ -0.55
HMGN1-220ENST00000492280 GHDCQ8N2G8 530 aa11.6□□□□□ -0.55
HMGN1-220ENST00000492280 DTX3Q8N9I9 347 aa11.6□□□□□ -0.55
HMGN1-220ENST00000492280 SRFBP1Q8NEF9 429 aaKnown RBP11.6□□□□□ -0.55
HMGN1-220ENST00000492280 PIGXQ8TBF5 258 aa11.6□□□□□ -0.55
HMGN1-220ENST00000492280 SCARF2Q96GP6 870 aaPredicted RBP11.6□□□□□ -0.55
HMGN1-220ENST00000492280 HCAR1Q9BXC0 346 aa11.6□□□□□ -0.55
HMGN1-220ENST00000492280 HDHD5Q9BXW7 423 aa11.6□□□□□ -0.55
HMGN1-220ENST00000492280 FAM60AQ9NP50 221 aa11.6□□□□□ -0.55
HMGN1-220ENST00000492280 ABCB9Q9NP78 766 aa11.6□□□□□ -0.55
HMGN1-220ENST00000492280 CHCHD3Q9NX63 227 aaKnown RBP11.6□□□□□ -0.55
HMGN1-220ENST00000492280 POU2F3Q9UKI9 436 aa11.6□□□□□ -0.55
HMGN1-220ENST00000492280 STUB1Q9UNE7 303 aa11.6□□□□□ -0.55
HMGN1-220ENST00000492280 UNC13CQ8NB66 2214 aa11.6□□□□□ -0.55
HMGN1-220ENST00000492280 CNTRLQ7Z7A1 2325 aa11.6□□□□□ -0.55
HMGN1-220ENST00000492280 A8MV72 311 aaPredicted RBP11.59□□□□□ -0.55
HMGN1-220ENST00000492280 HRO43593 1189 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 B3GALT2O43825 422 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 MRPL3P09001 348 aaKnown RBP11.59□□□□□ -0.55
HMGN1-220ENST00000492280 MSL3P1P0C860 447 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 HNRNPA2B1P22626 353 aaKnown RBP11.59□□□□□ -0.55
HMGN1-220ENST00000492280 GCGRP47871 477 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 ST3GAL3Q11203 375 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 C1DQ13901 141 aaKnown RBP11.59□□□□□ -0.55
HMGN1-220ENST00000492280 ERV3-1Q14264 604 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 SUZ12Q15022 739 aaKnown RBP11.59□□□□□ -0.55
HMGN1-220ENST00000492280 OCLNQ16625 522 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 CRTC2Q53ET0 693 aaPredicted RBP11.59□□□□□ -0.55
HMGN1-220ENST00000492280 CCDC190Q86UF4 302 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 SIRT6Q8N6T7 355 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 PROKR2Q8NFJ6 384 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 OR4N2Q8NGD1 307 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 OR51G2Q8NGK0 314 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 SLC37A2Q8TED4 501 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 SLC30A2Q9BRI3 323 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 S1PR5Q9H228 398 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 HINT3Q9NQE9 182 aaKnown RBP11.59□□□□□ -0.55
HMGN1-220ENST00000492280 HRASLS2Q9NWW9 162 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 NDRG2Q9UN36 371 aaKnown RBP11.59□□□□□ -0.55
HMGN1-220ENST00000492280 DIMT1Q9UNQ2 313 aaKnown RBP11.59□□□□□ -0.55
HMGN1-220ENST00000492280 CYP8B1Q9UNU6 501 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 NCKAP1Q9Y2A7 1128 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 PEX16Q9Y5Y5 336 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 C2orf92A0A1B0GVN3 265 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 SHISA3A0PJX4 238 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 PRODHO43272 600 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 ADAM11O75078 769 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 ANXA11P50995 505 aaKnown RBP11.59□□□□□ -0.55
HMGN1-220ENST00000492280 ZNF136P52737 540 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 FABP5Q01469 135 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 PLAURQ03405 335 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 PRKCDQ05655 676 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 TSPAN31Q12999 210 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 ZNF79Q15937 498 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 MEDAGQ5VYS4 303 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 SLC36A4Q6YBV0 504 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 SDF2Q99470 211 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 TRIM45Q9H8W5 580 aaPredicted RBP11.59□□□□□ -0.55
HMGN1-220ENST00000492280 LYARQ9NX58 379 aaKnown RBP11.59□□□□□ -0.55
HMGN1-220ENST00000492280 USP36Q9P275 1121 aaKnown RBP11.59□□□□□ -0.55
HMGN1-220ENST00000492280 HEBP2Q9Y5Z4 205 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 TRAV27A0A087WT01 109 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 HYKKA2RU49 373 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 TAF4O00268 1085 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 TFECO14948 347 aaPredicted RBP11.59□□□□□ -0.55
HMGN1-220ENST00000492280 CLUP10909 449 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 GABRG2P18507 467 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 MAKP20794 623 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 ATP6V1E1P36543 226 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 SLC16A1P53985 500 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 WNT4P56705 351 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 FXYD6P3P58550 94 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 EFNB1P98172 346 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 MLLT11Q13015 90 aaPredicted RBP11.59□□□□□ -0.55
HMGN1-220ENST00000492280 HTR4Q13639 388 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 CEBPEQ15744 281 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 NXNL2Q5VZ03 156 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 PLBD1Q6P4A8 553 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 CPOQ8IVL8 374 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 COX18Q8N8Q8 333 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 ZBTB8BQ8NAP8 495 aaPredicted RBP11.59□□□□□ -0.55
HMGN1-220ENST00000492280 OR9A4Q8NGU2 314 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 PPP1R14BQ96C90 147 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 PTCHD1Q96NR3 888 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 CDCA3Q99618 268 aaPredicted RBP11.59□□□□□ -0.55
HMGN1-220ENST00000492280 SARGQ9BW04 601 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 KLHL28Q9NXS3 571 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 MAT2BQ9NZL9 334 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 CD207Q9UJ71 328 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 FBXL4Q9UKA2 621 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 PILRAQ9UKJ1 303 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 TBC1D24Q9ULP9 559 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 SSR3Q9UNL2 185 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 V9GYH0 126 aa11.59□□□□□ -0.55
HMGN1-220ENST00000492280 LRP4O75096 1905 aa11.58□□□□□ -0.56
HMGN1-220ENST00000492280 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.58□□□□□ -0.56
HMGN1-220ENST00000492280 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.58□□□□□ -0.56
HMGN1-220ENST00000492280 CD8B2A6NJW9 211 aa11.58□□□□□ -0.56
HMGN1-220ENST00000492280 B4DGG1 531 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms