RNA–Protein interactions for RNA: ENST00000491390.1

NCSTN-214, Transcript of nicastrin, humanhuman

TSL 3

Gene NCSTN, Length 592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-214ENST00000491390 TRRAPQ9Y4A5 3859 aa9.95□□□□□ -0.82
NCSTN-214ENST00000491390 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.95□□□□□ -0.82
NCSTN-214ENST00000491390 CCDC189A1A4V9 331 aa9.95□□□□□ -0.82
NCSTN-214ENST00000491390 OR2M5A3KFT3 312 aa9.95□□□□□ -0.82
NCSTN-214ENST00000491390 OTCP00480 354 aa9.95□□□□□ -0.82
NCSTN-214ENST00000491390 PEPDP12955 493 aa9.95□□□□□ -0.82
NCSTN-214ENST00000491390 MAGEA12P43365 314 aa9.95□□□□□ -0.82
NCSTN-214ENST00000491390 CAV1Q03135 178 aa9.95□□□□□ -0.82
NCSTN-214ENST00000491390 IFFO1Q0D2I5 559 aa9.95□□□□□ -0.82
NCSTN-214ENST00000491390 KRT71Q3SY84 523 aa9.95□□□□□ -0.82
NCSTN-214ENST00000491390 OR2A2Q6IF42 318 aa9.95□□□□□ -0.82
NCSTN-214ENST00000491390 METTL2BQ6P1Q9 378 aaKnown RBP9.95□□□□□ -0.82
NCSTN-214ENST00000491390 MARCH3Q86UD3 253 aa9.95□□□□□ -0.82
NCSTN-214ENST00000491390 C10orf67Q8IYJ2 551 aa9.95□□□□□ -0.82
NCSTN-214ENST00000491390 C16orf78Q8WTQ4 265 aa9.95□□□□□ -0.82
NCSTN-214ENST00000491390 RNF138Q8WVD3 245 aa9.95□□□□□ -0.82
NCSTN-214ENST00000491390 TLCD1Q96CP7 247 aa9.95□□□□□ -0.82
NCSTN-214ENST00000491390 MTBPQ96DY7 904 aa9.95□□□□□ -0.82
NCSTN-214ENST00000491390 NPAS1Q99742 590 aa9.95□□□□□ -0.82
NCSTN-214ENST00000491390 ACPTQ9BZG2 426 aa9.95□□□□□ -0.82
NCSTN-214ENST00000491390 PLA2G12AQ9BZM1 189 aa9.95□□□□□ -0.82
NCSTN-214ENST00000491390 RNF122Q9H9V4 155 aa9.95□□□□□ -0.82
NCSTN-214ENST00000491390 BRF2Q9HAW0 419 aa9.95□□□□□ -0.82
NCSTN-214ENST00000491390 YAE1D1Q9NRH1 226 aa9.95□□□□□ -0.82
NCSTN-214ENST00000491390 SENP1Q9P0U3 644 aa9.95□□□□□ -0.82
NCSTN-214ENST00000491390 VPS29Q9UBQ0 182 aa9.95□□□□□ -0.82
NCSTN-214ENST00000491390 SNX6Q9UNH7 406 aa9.95□□□□□ -0.82
NCSTN-214ENST00000491390 PROCRQ9UNN8 238 aa9.95□□□□□ -0.82
NCSTN-214ENST00000491390 GNG14A0A1W2PPG7 69 aa9.94□□□□□ -0.82
NCSTN-214ENST00000491390 A8MV72 311 aaPredicted RBP9.94□□□□□ -0.82
NCSTN-214ENST00000491390 TRIM49D1C9J1S8 452 aa9.94□□□□□ -0.82
NCSTN-214ENST00000491390 POC1B-GALNT4F8VUJ3 575 aa9.94□□□□□ -0.82
NCSTN-214ENST00000491390 KLF4O43474 513 aa9.94□□□□□ -0.82
NCSTN-214ENST00000491390 FADS1O60427 444 aa9.94□□□□□ -0.82
NCSTN-214ENST00000491390 ABCB7O75027 752 aa9.94□□□□□ -0.82
NCSTN-214ENST00000491390 TMCC2O75069 709 aa9.94□□□□□ -0.82
NCSTN-214ENST00000491390 NTN1O95631 604 aa9.94□□□□□ -0.82
NCSTN-214ENST00000491390 FAM107AO95990 144 aa9.94□□□□□ -0.82
NCSTN-214ENST00000491390 TP53P04637 393 aaPredicted RBP9.94□□□□□ -0.82
NCSTN-214ENST00000491390 JUNP05412 331 aaKnown RBP9.94□□□□□ -0.82
NCSTN-214ENST00000491390 CRHP06850 196 aa9.94□□□□□ -0.82
NCSTN-214ENST00000491390 INHBAP08476 426 aa9.94□□□□□ -0.82
NCSTN-214ENST00000491390 TBXA2RP21731 343 aa9.94□□□□□ -0.82
NCSTN-214ENST00000491390 PCYT1AP49585 367 aa9.94□□□□□ -0.82
NCSTN-214ENST00000491390 PNLIPRP2P54317 469 aa9.94□□□□□ -0.82
NCSTN-214ENST00000491390 TRA2BP62995 288 aaKnown RBP9.94□□□□□ -0.82
NCSTN-214ENST00000491390 PSG6Q00889 435 aa9.94□□□□□ -0.82
NCSTN-214ENST00000491390 CLCQ05315 142 aa9.94□□□□□ -0.82
NCSTN-214ENST00000491390 BCL2A1Q16548 175 aa9.94□□□□□ -0.82
NCSTN-214ENST00000491390 UNC50Q53HI1 259 aa9.94□□□□□ -0.82
NCSTN-214ENST00000491390 TMEM107Q6UX40 140 aa9.94□□□□□ -0.82
NCSTN-214ENST00000491390 PLEKHM3Q6ZWE6 761 aa9.94□□□□□ -0.82
NCSTN-214ENST00000491390 GALNT10Q86SR1 603 aa9.94□□□□□ -0.82
NCSTN-214ENST00000491390 WFDC8Q8IUA0 241 aa9.94□□□□□ -0.82
NCSTN-214ENST00000491390 FAM9CQ8IZT9 166 aa9.94□□□□□ -0.82
NCSTN-214ENST00000491390 TMEM151AQ8N4L1 468 aa9.94□□□□□ -0.82
NCSTN-214ENST00000491390 DUSP19Q8WTR2 217 aa9.94□□□□□ -0.82
NCSTN-214ENST00000491390 BBS4Q96RK4 519 aa9.94□□□□□ -0.82
NCSTN-214ENST00000491390 KCNA7Q96RP8 456 aa9.94□□□□□ -0.82
NCSTN-214ENST00000491390 PAFAH2Q99487 392 aa9.94□□□□□ -0.82
NCSTN-214ENST00000491390 KLHDC3Q9BQ90 382 aa9.94□□□□□ -0.82
NCSTN-214ENST00000491390 SLC39A3Q9BRY0 314 aa9.94□□□□□ -0.82
NCSTN-214ENST00000491390 REG4Q9BYZ8 158 aa9.94□□□□□ -0.82
NCSTN-214ENST00000491390 AMBRA1Q9C0C7 1298 aa9.94□□□□□ -0.82
NCSTN-214ENST00000491390 ACSS3Q9H6R3 686 aa9.94□□□□□ -0.82
NCSTN-214ENST00000491390 SLC35C2Q9NQQ7 365 aa9.94□□□□□ -0.82
NCSTN-214ENST00000491390 ELOVL5Q9NYP7 299 aa9.94□□□□□ -0.82
NCSTN-214ENST00000491390 MCM8Q9UJA3 840 aa9.94□□□□□ -0.82
NCSTN-214ENST00000491390 CDC42EP3Q9UKI2 254 aa9.94□□□□□ -0.82
NCSTN-214ENST00000491390 MRPS18CQ9Y3D5 142 aaKnown RBP9.94□□□□□ -0.82
NCSTN-214ENST00000491390 TIMM22Q9Y584 194 aa9.94□□□□□ -0.82
NCSTN-214ENST00000491390 PRKDCP78527 4128 aaKnown RBP9.93□□□□□ -0.82
NCSTN-214ENST00000491390 GXYLT2A0PJZ3 443 aa9.93□□□□□ -0.82
NCSTN-214ENST00000491390 EMC8O43402 210 aa9.93□□□□□ -0.82
NCSTN-214ENST00000491390 TNFRSF21O75509 655 aa9.93□□□□□ -0.82
NCSTN-214ENST00000491390 BCAS2O75934 225 aaPredicted RBP9.93□□□□□ -0.82
NCSTN-214ENST00000491390 SUPT7LO94864 414 aa9.93□□□□□ -0.82
NCSTN-214ENST00000491390 NCBP2P52298 156 aaKnown RBP eCLIP9.93□□□□□ -0.82
NCSTN-214ENST00000491390 EEF1A1P68104 462 aaKnown RBP9.93□□□□□ -0.82
NCSTN-214ENST00000491390 GUCY1A3Q02108 690 aa9.93□□□□□ -0.82
NCSTN-214ENST00000491390 GUSBP1Q15486 140 aa9.93□□□□□ -0.82
NCSTN-214ENST00000491390 TSC22D1Q15714 1073 aa9.93□□□□□ -0.82
NCSTN-214ENST00000491390 SGCBQ16585 318 aa9.93□□□□□ -0.82
NCSTN-214ENST00000491390 EEF1A1P5Q5VTE0 462 aa9.93□□□□□ -0.82
NCSTN-214ENST00000491390 APOOLQ6UXV4 268 aa9.93□□□□□ -0.82
NCSTN-214ENST00000491390 ZNF704Q6ZNC4 412 aaPredicted RBP9.93□□□□□ -0.82
NCSTN-214ENST00000491390 DNM1P46Q6ZS02 220 aa9.93□□□□□ -0.82
NCSTN-214ENST00000491390 TRMT10CQ7L0Y3 403 aaKnown RBP9.93□□□□□ -0.82
NCSTN-214ENST00000491390 GATSQ8NAP1 163 aa9.93□□□□□ -0.82
NCSTN-214ENST00000491390 SLC9A6Q92581 669 aa9.93□□□□□ -0.82
NCSTN-214ENST00000491390 C1GALT1C1Q96EU7 318 aa9.93□□□□□ -0.82
NCSTN-214ENST00000491390 PLPPR2Q96GM1 343 aa9.93□□□□□ -0.82
NCSTN-214ENST00000491390 TMEM237Q96Q45 408 aa9.93□□□□□ -0.82
NCSTN-214ENST00000491390 MRPL57Q9BQC6 102 aaKnown RBP9.93□□□□□ -0.82
NCSTN-214ENST00000491390 MRPL46Q9H2W6 279 aaKnown RBP9.93□□□□□ -0.82
NCSTN-214ENST00000491390 CDC42EP4Q9H3Q1 356 aaKnown RBP9.93□□□□□ -0.82
NCSTN-214ENST00000491390 GIMAP4Q9NUV9 329 aa9.93□□□□□ -0.82
NCSTN-214ENST00000491390 TMCO1Q9UM00 188 aa9.93□□□□□ -0.82
NCSTN-214ENST00000491390 VDAC3Q9Y277 283 aa9.93□□□□□ -0.82
NCSTN-214ENST00000491390 GMNCA6NCL1 334 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms