RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 ZNF614Q8N883 585 aa13.16□□□□□ -0.3
HLA-F-229ENST00000489502 ANKFN1Q8N957 763 aa13.16□□□□□ -0.3
HLA-F-229ENST00000489502 GALNT11Q8NCW6 608 aa13.16□□□□□ -0.3
HLA-F-229ENST00000489502 OR4C3Q8NH37 302 aa13.16□□□□□ -0.3
HLA-F-229ENST00000489502 GNRHR2Q96P88 292 aa13.16□□□□□ -0.3
HLA-F-229ENST00000489502 SDF2Q99470 211 aa13.16□□□□□ -0.3
HLA-F-229ENST00000489502 G6PC3Q9BUM1 346 aa13.16□□□□□ -0.3
HLA-F-229ENST00000489502 TBL1XR1Q9BZK7 514 aa13.16□□□□□ -0.3
HLA-F-229ENST00000489502 IKZF5Q9H5V7 419 aa13.16□□□□□ -0.3
HLA-F-229ENST00000489502 EXD2Q9NVH0 621 aa13.16□□□□□ -0.3
HLA-F-229ENST00000489502 SEC14L3Q9UDX4 400 aa13.16□□□□□ -0.3
HLA-F-229ENST00000489502 TENM4Q6N022 2769 aa13.16□□□□□ -0.3
HLA-F-229ENST00000489502 ANKUB1A6NFN9 424 aa13.15□□□□□ -0.3
HLA-F-229ENST00000489502 DUXAA6NLW8 204 aa13.15□□□□□ -0.3
HLA-F-229ENST00000489502 CLIC1O00299 241 aa13.15□□□□□ -0.3
HLA-F-229ENST00000489502 GMFGO60234 142 aa13.15□□□□□ -0.3
HLA-F-229ENST00000489502 TNFRSF21O75509 655 aa13.15□□□□□ -0.3
HLA-F-229ENST00000489502 PDE9AO76083 593 aa13.15□□□□□ -0.3
HLA-F-229ENST00000489502 AK1P00568 194 aa13.15□□□□□ -0.3
HLA-F-229ENST00000489502 TCEA1P23193 301 aaKnown RBP13.15□□□□□ -0.3
HLA-F-229ENST00000489502 CRATP43155 626 aa13.15□□□□□ -0.3
HLA-F-229ENST00000489502 DSTNP60981 165 aa13.15□□□□□ -0.3
HLA-F-229ENST00000489502 HPCAP84074 193 aa13.15□□□□□ -0.3
HLA-F-229ENST00000489502 NFYCQ13952 458 aa13.15□□□□□ -0.3
HLA-F-229ENST00000489502 CAPRIN1Q14444 709 aaKnown RBP13.15□□□□□ -0.3
HLA-F-229ENST00000489502 SYPL1Q16563 259 aa13.15□□□□□ -0.3
HLA-F-229ENST00000489502 ARHGAP11BQ3KRB8 267 aa13.15□□□□□ -0.3
HLA-F-229ENST00000489502 GPAT3Q53EU6 434 aa13.15□□□□□ -0.3
HLA-F-229ENST00000489502 TIGD3Q6B0B8 471 aa13.15□□□□□ -0.3
HLA-F-229ENST00000489502 REP15Q6BDI9 236 aa13.15□□□□□ -0.3
HLA-F-229ENST00000489502 DLEU7Q6UYE1 221 aa13.15□□□□□ -0.3
HLA-F-229ENST00000489502 TREML1Q86YW5 311 aa13.15□□□□□ -0.3
HLA-F-229ENST00000489502 C10orf111Q8N326 155 aa13.15□□□□□ -0.3
HLA-F-229ENST00000489502 WDSUB1Q8N9V3 476 aa13.15□□□□□ -0.3
HLA-F-229ENST00000489502 ST6GALNAC3Q8NDV1 305 aa13.15□□□□□ -0.3
HLA-F-229ENST00000489502 OR1J4Q8NGS1 313 aa13.15□□□□□ -0.3
HLA-F-229ENST00000489502 ROPN1LQ96C74 230 aa13.15□□□□□ -0.3
HLA-F-229ENST00000489502 CPPED1Q9BRF8 314 aaPredicted RBP13.15□□□□□ -0.3
HLA-F-229ENST00000489502 SLC39A3Q9BRY0 314 aa13.15□□□□□ -0.3
HLA-F-229ENST00000489502 ZNF350Q9GZX5 532 aa13.15□□□□□ -0.3
HLA-F-229ENST00000489502 SLC6A15Q9H2J7 730 aa13.15□□□□□ -0.3
HLA-F-229ENST00000489502 ZDHHC11Q9H8X9 412 aa13.15□□□□□ -0.3
HLA-F-229ENST00000489502 PPP4R1LQ9P1A2 415 aa13.15□□□□□ -0.3
HLA-F-229ENST00000489502 B4GALT7Q9UBV7 327 aa13.15□□□□□ -0.3
HLA-F-229ENST00000489502 FBXL2Q9UKC9 423 aa13.15□□□□□ -0.3
HLA-F-229ENST00000489502 MKLN1Q9UL63 735 aa13.15□□□□□ -0.3
HLA-F-229ENST00000489502 PCDHGB3Q9Y5G1 929 aa13.15□□□□□ -0.3
HLA-F-229ENST00000489502 MRASO14807 208 aa13.14□□□□□ -0.31
HLA-F-229ENST00000489502 KIAA0513O60268 411 aa13.14□□□□□ -0.31
HLA-F-229ENST00000489502 FCMRO60667 390 aa13.14□□□□□ -0.31
HLA-F-229ENST00000489502 CCDC22O60826 627 aa13.14□□□□□ -0.31
HLA-F-229ENST00000489502 SHOX2O60902 331 aaPredicted RBP13.14□□□□□ -0.31
HLA-F-229ENST00000489502 H6PDO95479 791 aa13.14□□□□□ -0.31
HLA-F-229ENST00000489502 CBX6O95503 412 aa13.14□□□□□ -0.31
HLA-F-229ENST00000489502 ANGPTL1O95841 491 aa13.14□□□□□ -0.31
HLA-F-229ENST00000489502 AGR2O95994 175 aa13.14□□□□□ -0.31
HLA-F-229ENST00000489502 NGFRP08138 427 aa13.14□□□□□ -0.31
HLA-F-229ENST00000489502 CHRM4P08173 479 aa13.14□□□□□ -0.31
HLA-F-229ENST00000489502 NUDT7P0C024 238 aa13.14□□□□□ -0.31
HLA-F-229ENST00000489502 TBXA2RP21731 343 aa13.14□□□□□ -0.31
HLA-F-229ENST00000489502 ELAVL4P26378 380 aaKnown RBP13.14□□□□□ -0.31
HLA-F-229ENST00000489502 ANXA11P50995 505 aaKnown RBP13.14□□□□□ -0.31
HLA-F-229ENST00000489502 SELPLGQ14242 412 aa13.14□□□□□ -0.31
HLA-F-229ENST00000489502 TOMM20Q15388 145 aa13.14□□□□□ -0.31
HLA-F-229ENST00000489502 MAPRE2Q15555 327 aa13.14□□□□□ -0.31
HLA-F-229ENST00000489502 GPR68Q15743 365 aa13.14□□□□□ -0.31
HLA-F-229ENST00000489502 CD226Q15762 336 aa13.14□□□□□ -0.31
HLA-F-229ENST00000489502 HYAL4Q2M3T9 481 aa13.14□□□□□ -0.31
HLA-F-229ENST00000489502 NDUFAF6Q330K2 333 aa13.14□□□□□ -0.31
HLA-F-229ENST00000489502 TYW3Q6IPR3 259 aaKnown RBP13.14□□□□□ -0.31
HLA-F-229ENST00000489502 FRRS1Q6ZNA5 592 aa13.14□□□□□ -0.31
HLA-F-229ENST00000489502 DPP10Q8N608 796 aa13.14□□□□□ -0.31
HLA-F-229ENST00000489502 OR4K17Q8NGC6 315 aa13.14□□□□□ -0.31
HLA-F-229ENST00000489502 TSPEARQ8WU66 669 aa13.14□□□□□ -0.31
HLA-F-229ENST00000489502 UBQLN3Q9H347 655 aa13.14□□□□□ -0.31
HLA-F-229ENST00000489502 RUBCNLQ9H714 662 aa13.14□□□□□ -0.31
HLA-F-229ENST00000489502 UBQLN4Q9NRR5 601 aa13.14□□□□□ -0.31
HLA-F-229ENST00000489502 MRGBPQ9NV56 204 aa13.14□□□□□ -0.31
HLA-F-229ENST00000489502 WDR45Q9Y484 360 aa13.14□□□□□ -0.31
HLA-F-229ENST00000489502 RELNP78509 3460 aa13.14□□□□□ -0.31
HLA-F-229ENST00000489502 LOC100653049A0A140TA62 436 aa13.13□□□□□ -0.31
HLA-F-229ENST00000489502 ALG1L2C9J202 215 aa13.13□□□□□ -0.31
HLA-F-229ENST00000489502 NPIPB9F8W1W9 429 aa13.13□□□□□ -0.31
HLA-F-229ENST00000489502 FXYD1O00168 92 aa13.13□□□□□ -0.31
HLA-F-229ENST00000489502 SCDO00767 359 aa13.13□□□□□ -0.31
HLA-F-229ENST00000489502 SLC22A2O15244 555 aa13.13□□□□□ -0.31
HLA-F-229ENST00000489502 OIP5O43482 229 aa13.13□□□□□ -0.31
HLA-F-229ENST00000489502 STX11O75558 287 aa13.13□□□□□ -0.31
HLA-F-229ENST00000489502 TRAPPC6AO75865 159 aa13.13□□□□□ -0.31
HLA-F-229ENST00000489502 KRT34O76011 436 aa13.13□□□□□ -0.31
HLA-F-229ENST00000489502 BCHEP06276 602 aa13.13□□□□□ -0.31
HLA-F-229ENST00000489502 HPGDP15428 266 aa13.13□□□□□ -0.31
HLA-F-229ENST00000489502 CLK3P49761 638 aaKnown RBP13.13□□□□□ -0.31
HLA-F-229ENST00000489502 MTPNP58546 118 aa13.13□□□□□ -0.31
HLA-F-229ENST00000489502 ELOAQ14241 798 aaKnown RBP13.13□□□□□ -0.31
HLA-F-229ENST00000489502 RGNQ15493 299 aa13.13□□□□□ -0.31
HLA-F-229ENST00000489502 MAPK11Q15759 364 aa13.13□□□□□ -0.31
HLA-F-229ENST00000489502 TRMT5Q32P41 509 aaKnown RBP13.13□□□□□ -0.31
HLA-F-229ENST00000489502 MMEL1Q495T6 779 aa13.13□□□□□ -0.31
HLA-F-229ENST00000489502 RPS26P11Q5JNZ5 115 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms