RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 DLSTP36957 453 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 RNF144AP50876 292 aaPredicted RBP9.25□□□□□ -0.93
USP11-211ENST00000489111 GPR143P51810 404 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 ATP12AP54707 1039 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 RPS18P62269 152 aaKnown RBP9.25□□□□□ -0.93
USP11-211ENST00000489111 EEF1A1P68104 462 aaKnown RBP9.25□□□□□ -0.93
USP11-211ENST00000489111 GK3PQ14409 553 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 PUM1Q14671 1186 aaKnown RBP eCLIP9.25□□□□□ -0.93
USP11-211ENST00000489111 GANABQ14697 944 aaKnown RBP9.25□□□□□ -0.93
USP11-211ENST00000489111 PCOLCEQ15113 449 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 ZNF141Q15928 474 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 MAPK14Q16539 360 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 IQCCQ4KMZ1 466 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 FGD3Q5JSP0 725 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 PDZK1Q5T2W1 519 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 MRPL2Q5T653 305 aaKnown RBP9.25□□□□□ -0.93
USP11-211ENST00000489111 PPP4R4Q6NUP7 873 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 PLEKHM3Q6ZWE6 761 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 COMTD1Q86VU5 262 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 LACC1Q8IV20 430 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 CMIPQ8IY22 773 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 PRR22Q8IZ63 422 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 ZNF441Q8N8Z8 693 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 APCDD1LQ8NCL9 501 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 PIK3C3Q8NEB9 887 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 OR8K3Q8NH51 312 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 NUBPLQ8TB37 319 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 ADAMTS14Q8WXS8 1223 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 NR4A3Q92570 626 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 DIO2Q92813 273 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 TP53INP1Q96A56 240 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 ZG16BQ96DA0 208 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 NRBF2Q96F24 287 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 PRRC1Q96M27 445 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 LMF1Q96S06 567 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 RBM4BQ9BQ04 359 aaKnown RBP9.25□□□□□ -0.93
USP11-211ENST00000489111 FNDC11Q9BVV2 318 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 RBM4Q9BWF3 364 aaKnown RBP9.25□□□□□ -0.93
USP11-211ENST00000489111 GPR87Q9BY21 358 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 DEFB126Q9BYW3 111 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 SPRY4Q9C004 299 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 EVA1AQ9H8M9 152 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 UBQLN4Q9NRR5 601 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 VNN3Q9NY84 501 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 TMCC3Q9ULS5 477 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 FARSAQ9Y285 508 aaKnown RBP9.25□□□□□ -0.93
USP11-211ENST00000489111 EP300Q09472 2414 aaPredicted RBP9.24□□□□□ -0.93
USP11-211ENST00000489111 ASCC3Q8N3C0 2202 aaKnown RBP9.24□□□□□ -0.93
USP11-211ENST00000489111 CDHR4A6H8M9 788 aa9.24□□□□□ -0.93
USP11-211ENST00000489111 CLDN24A6NM45 220 aa9.24□□□□□ -0.93
USP11-211ENST00000489111 NPIPB9F8W1W9 429 aa9.24□□□□□ -0.93
USP11-211ENST00000489111 H3BNH8 94 aa9.24□□□□□ -0.93
USP11-211ENST00000489111 J3KTA2 159 aa9.24□□□□□ -0.93
USP11-211ENST00000489111 SCDO00767 359 aa9.24□□□□□ -0.93
USP11-211ENST00000489111 TM4SF5O14894 197 aa9.24□□□□□ -0.93
USP11-211ENST00000489111 FRS3O43559 492 aa9.24□□□□□ -0.93
USP11-211ENST00000489111 PRKNO60260 465 aaPredicted RBP9.24□□□□□ -0.93
USP11-211ENST00000489111 UTS2O95399 124 aa9.24□□□□□ -0.93
USP11-211ENST00000489111 H1F0P07305 194 aaKnown RBP9.24□□□□□ -0.93
USP11-211ENST00000489111 COX6A1P12074 109 aa9.24□□□□□ -0.93
USP11-211ENST00000489111 ZNF26P17031 533 aaPredicted RBP9.24□□□□□ -0.93
USP11-211ENST00000489111 ALDH3A2P51648 485 aa9.24□□□□□ -0.93
USP11-211ENST00000489111 TAS2R41P59536 307 aa9.24□□□□□ -0.93
USP11-211ENST00000489111 PPP1R8Q12972 351 aaKnown RBP9.24□□□□□ -0.93
USP11-211ENST00000489111 DAG1Q14118 895 aa9.24□□□□□ -0.93
USP11-211ENST00000489111 COLEC12Q5KU26 742 aa9.24□□□□□ -0.93
USP11-211ENST00000489111 AP1ARQ63HQ0 302 aa9.24□□□□□ -0.93
USP11-211ENST00000489111 PLAG1Q6DJT9 500 aa9.24□□□□□ -0.93
USP11-211ENST00000489111 NDUFAF7Q7L592 441 aa9.24□□□□□ -0.93
USP11-211ENST00000489111 TSEN54Q7Z6J9 526 aaKnown RBP9.24□□□□□ -0.93
USP11-211ENST00000489111 MARCH9Q86YJ5 346 aa9.24□□□□□ -0.93
USP11-211ENST00000489111 RAB43Q86YS6 212 aa9.24□□□□□ -0.93
USP11-211ENST00000489111 RBM45Q8IUH3 476 aaKnown RBP9.24□□□□□ -0.93
USP11-211ENST00000489111 CLIP4Q8N3C7 705 aa9.24□□□□□ -0.93
USP11-211ENST00000489111 OR11G2Q8NGC1 345 aa9.24□□□□□ -0.93
USP11-211ENST00000489111 OR4D11Q8NGI4 311 aa9.24□□□□□ -0.93
USP11-211ENST00000489111 OR6T1Q8NGN1 323 aa9.24□□□□□ -0.93
USP11-211ENST00000489111 OR52J3Q8NH60 311 aa9.24□□□□□ -0.93
USP11-211ENST00000489111 SLC22A8Q8TCC7 542 aa9.24□□□□□ -0.93
USP11-211ENST00000489111 MAGEE2Q8TD90 523 aaPredicted RBP9.24□□□□□ -0.93
USP11-211ENST00000489111 THAP3Q8WTV1 239 aaPredicted RBP9.24□□□□□ -0.93
USP11-211ENST00000489111 KIAA1143Q96AT1 154 aaPredicted RBP9.24□□□□□ -0.93
USP11-211ENST00000489111 OMA1Q96E52 524 aa9.24□□□□□ -0.93
USP11-211ENST00000489111 ADOQ96SZ5 270 aa9.24□□□□□ -0.93
USP11-211ENST00000489111 SLC29A1Q99808 456 aa9.24□□□□□ -0.93
USP11-211ENST00000489111 OSBPL10Q9BXB5 764 aa9.24□□□□□ -0.93
USP11-211ENST00000489111 GABARAPL1Q9H0R8 117 aa9.24□□□□□ -0.93
USP11-211ENST00000489111 RLIMQ9NVW2 624 aa9.24□□□□□ -0.93
USP11-211ENST00000489111 PDP1Q9P0J1 537 aaPredicted RBP9.24□□□□□ -0.93
USP11-211ENST00000489111 RHCGQ9UBD6 479 aa9.24□□□□□ -0.93
USP11-211ENST00000489111 KCNE5Q9UJ90 142 aa9.24□□□□□ -0.93
USP11-211ENST00000489111 ZNF223Q9UK11 482 aaPredicted RBP9.24□□□□□ -0.93
USP11-211ENST00000489111 KCND3Q9UK17 655 aa9.24□□□□□ -0.93
USP11-211ENST00000489111 SLC35A3Q9Y2D2 325 aa9.24□□□□□ -0.93
USP11-211ENST00000489111 LYVE1Q9Y5Y7 322 aa9.24□□□□□ -0.93
USP11-211ENST00000489111 ZFHX2Q9C0A1 2572 aaPredicted RBP9.24□□□□□ -0.93
USP11-211ENST00000489111 MYO15AQ9UKN7 3530 aa9.24□□□□□ -0.93
USP11-211ENST00000489111 NUP210LQ5VU65 1888 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 COL27A1Q8IZC6 1860 aaPredicted RBP9.23□□□□□ -0.93
USP11-211ENST00000489111 A0A1W2PQ72 361 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms