RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 PPP1R3AQ16821 1122 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 LRRC37A5PQ49AS3 106 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 TMEM35AQ53FP2 167 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 XKR6Q5GH73 641 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 LCN1P1Q5VSP4 162 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 SLC8B1Q6J4K2 584 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 TRNP1Q6NT89 227 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 H3F3CQ6NXT2 135 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 PAQR6Q6TCH4 344 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 ASCL4Q6XD76 172 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 CCNI2Q6ZMN8 369 aaPredicted RBP2.98□□□□□ -1.93
PRPF4-203ENST00000488937 ZNF793Q6ZN11 406 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 ASB18Q6ZVZ8 466 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 TRMT10CQ7L0Y3 403 aaKnown RBP2.98□□□□□ -1.93
PRPF4-203ENST00000488937 NDUFAF7Q7L592 441 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 BHLHA15Q7RTS1 189 aaPredicted RBP2.98□□□□□ -1.93
PRPF4-203ENST00000488937 PIWIL4Q7Z3Z4 852 aaKnown RBP2.98□□□□□ -1.93
PRPF4-203ENST00000488937 MOB3BQ86TA1 216 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 ZNF554Q86TJ5 538 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 ACOT1Q86TX2 421 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 SERPINA9Q86WD7 417 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 DCP1BQ8IZD4 617 aaKnown RBP2.98□□□□□ -1.93
PRPF4-203ENST00000488937 PELI3Q8N2H9 469 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 CLIP4Q8N3C7 705 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 PRR26Q8N8Z3 221 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 ZNF565Q8N9K5 539 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 LMNTD1Q8N9Z9 388 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 SDR9C7Q8NEX9 313 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 OR9G4Q8NGQ1 327 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 GPR148Q8TDV2 347 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 NUDCD2Q8WVJ2 157 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 SMPDL3AQ92484 453 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 PNPLA2Q96AD5 504 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 MRGPRFQ96AM1 343 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 NXPE2Q96DL1 559 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 CERS2Q96G23 380 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 URB1-AS1Q96HZ7 61 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 ABHD8Q96I13 439 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 ZNF578Q96N58 590 aaPredicted RBP2.98□□□□□ -1.93
PRPF4-203ENST00000488937 FOXN4Q96NZ1 517 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 IL4I1Q96RQ9 567 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 NEURL2Q9BR09 285 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 TTYH2Q9BSA4 534 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 FEM1AQ9BSK4 669 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 RPP25Q9BUL9 199 aaKnown RBP2.98□□□□□ -1.93
PRPF4-203ENST00000488937 TSSK1BQ9BXA7 367 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 BBS2Q9BXC9 721 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 DCLK3Q9C098 648 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 OR2B2Q9GZK3 357 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 SHARPINQ9H0F6 387 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 RAB1BQ9H0U4 201 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 GAL3ST2Q9H3Q3 398 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 ANKRD19PQ9H560 264 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 RANBP3Q9H6Z4 567 aaPredicted RBP2.98□□□□□ -1.93
PRPF4-203ENST00000488937 EGLN3Q9H6Z9 239 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 PELI2Q9HAT8 420 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 S100A14Q9HCY8 104 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 NT5MQ9NPB1 228 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 SIGLEC8Q9NYZ4 499 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 SMARCAL1Q9NZC9 954 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 MTRF1LQ9UGC7 380 aaKnown RBP2.98□□□□□ -1.93
PRPF4-203ENST00000488937 PITPNC1Q9UKF7 332 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 IKZF2Q9UKS7 526 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 AGO1Q9UL18 857 aaKnown RBP2.98□□□□□ -1.93
PRPF4-203ENST00000488937 RNF24Q9Y225 148 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 EIF3LQ9Y262 564 aaKnown RBP2.98□□□□□ -1.93
PRPF4-203ENST00000488937 STARD10Q9Y365 291 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 PPIL1Q9Y3C6 166 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 OR2W1Q9Y3N9 320 aa2.98□□□□□ -1.93
PRPF4-203ENST00000488937 SYNJ2O15056 1496 aa2.97□□□□□ -1.93
PRPF4-203ENST00000488937 PDS5AQ29RF7 1337 aaKnown RBP2.97□□□□□ -1.93
PRPF4-203ENST00000488937 IGKV2D-30A0A075B6S6 120 aa2.97□□□□□ -1.93
PRPF4-203ENST00000488937 KCNE1BA0A087WTH5 132 aa2.97□□□□□ -1.93
PRPF4-203ENST00000488937 LOC101059948A0A1B0GTJ6 334 aa2.97□□□□□ -1.93
PRPF4-203ENST00000488937 PLSCR5A0PG75 271 aa2.97□□□□□ -1.93
PRPF4-203ENST00000488937 LRP5LA4QPB2 252 aa2.97□□□□□ -1.93
PRPF4-203ENST00000488937 TUBAL3A6NHL2 446 aa2.97□□□□□ -1.93
PRPF4-203ENST00000488937 PDZK1P1A8MUH7 402 aa2.97□□□□□ -1.93
PRPF4-203ENST00000488937 A8MVM7 634 aa2.97□□□□□ -1.93
PRPF4-203ENST00000488937 ZNF99A8MXY4 864 aaPredicted RBP2.97□□□□□ -1.93
PRPF4-203ENST00000488937 F8VZ95 297 aa2.97□□□□□ -1.93
PRPF4-203ENST00000488937 TEX46H3BTG2 121 aa2.97□□□□□ -1.93
PRPF4-203ENST00000488937 CHST1O43916 411 aa2.97□□□□□ -1.93
PRPF4-203ENST00000488937 RAMP3O60896 148 aa2.97□□□□□ -1.93
PRPF4-203ENST00000488937 KCNJ13O60928 360 aa2.97□□□□□ -1.93
PRPF4-203ENST00000488937 STX11O75558 287 aa2.97□□□□□ -1.93
PRPF4-203ENST00000488937 NXPH2O95156 264 aa2.97□□□□□ -1.93
PRPF4-203ENST00000488937 TPM3P06753 285 aa2.97□□□□□ -1.93
PRPF4-203ENST00000488937 DCNP07585 359 aaKnown RBP2.97□□□□□ -1.93
PRPF4-203ENST00000488937 H2BFMP0C1H6 154 aa2.97□□□□□ -1.93
PRPF4-203ENST00000488937 ANXA3P12429 323 aa2.97□□□□□ -1.93
PRPF4-203ENST00000488937 TNNI1P19237 187 aa2.97□□□□□ -1.93
PRPF4-203ENST00000488937 LHCGRP22888 699 aa2.97□□□□□ -1.93
PRPF4-203ENST00000488937 SSTR2P30874 369 aa2.97□□□□□ -1.93
PRPF4-203ENST00000488937 HOXA6P31267 233 aa2.97□□□□□ -1.93
PRPF4-203ENST00000488937 TMPOP42166 694 aaKnown RBP2.97□□□□□ -1.93
PRPF4-203ENST00000488937 SLC1A4P43007 532 aa2.97□□□□□ -1.93
PRPF4-203ENST00000488937 GYG1P46976 350 aa2.97□□□□□ -1.93
PRPF4-203ENST00000488937 FHITP49789 147 aa2.97□□□□□ -1.93
PRPF4-203ENST00000488937 SLC26A2P50443 739 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms