RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 DPH5Q9H2P9 285 aa2.4□□□□□ -2.03
CD46-215ENST00000488596 COQ10BQ9H8M1 238 aa2.4□□□□□ -2.03
CD46-215ENST00000488596 EXOSC3Q9NQT5 275 aaKnown RBP2.4□□□□□ -2.03
CD46-215ENST00000488596 AGPAT5Q9NUQ2 364 aa2.4□□□□□ -2.03
CD46-215ENST00000488596 SENP1Q9P0U3 644 aa2.4□□□□□ -2.03
CD46-215ENST00000488596 TP53TG3Q9ULZ0 132 aa2.4□□□□□ -2.03
CD46-215ENST00000488596 AURKCQ9UQB9 309 aa2.4□□□□□ -2.03
CD46-215ENST00000488596 CHMP2BQ9UQN3 213 aa2.4□□□□□ -2.03
CD46-215ENST00000488596 AP4B1Q9Y6B7 739 aa2.4□□□□□ -2.03
CD46-215ENST00000488596 A0A087WZY1 265 aa2.39□□□□□ -2.03
CD46-215ENST00000488596 A0A1B0GUL7 405 aa2.39□□□□□ -2.03
CD46-215ENST00000488596 SAGE2PA6NJ88 616 aa2.39□□□□□ -2.03
CD46-215ENST00000488596 LATO43561 262 aa2.39□□□□□ -2.03
CD46-215ENST00000488596 DUX1O43812 170 aa2.39□□□□□ -2.03
CD46-215ENST00000488596 IGKV3-15P01624 115 aa2.39□□□□□ -2.03
CD46-215ENST00000488596 PRG2P13727 222 aa2.39□□□□□ -2.03
CD46-215ENST00000488596 MAGEA5P43359 124 aa2.39□□□□□ -2.03
CD46-215ENST00000488596 XCR1P46094 333 aa2.39□□□□□ -2.03
CD46-215ENST00000488596 TRPC1P48995 793 aa2.39□□□□□ -2.03
CD46-215ENST00000488596 EMDP50402 254 aa2.39□□□□□ -2.03
CD46-215ENST00000488596 LIM2P55344 173 aa2.39□□□□□ -2.03
CD46-215ENST00000488596 OSTNP61366 133 aa2.39□□□□□ -2.03
CD46-215ENST00000488596 CD47Q08722 323 aa2.39□□□□□ -2.03
CD46-215ENST00000488596 SCGB2A2Q13296 93 aa2.39□□□□□ -2.03
CD46-215ENST00000488596 KCNJ11Q14654 390 aa2.39□□□□□ -2.03
CD46-215ENST00000488596 CHI3L2Q15782 390 aa2.39□□□□□ -2.03
CD46-215ENST00000488596 QRICH1Q2TAL8 776 aa2.39□□□□□ -2.03
CD46-215ENST00000488596 RNF212Q495C1 297 aa2.39□□□□□ -2.03
CD46-215ENST00000488596 FAM120AOSQ5T036 256 aa2.39□□□□□ -2.03
CD46-215ENST00000488596 SULT1C3Q6IMI6 304 aa2.39□□□□□ -2.03
CD46-215ENST00000488596 ARSKQ6UWY0 536 aa2.39□□□□□ -2.03
CD46-215ENST00000488596 BAIAP2L2Q6UXY1 529 aa2.39□□□□□ -2.03
CD46-215ENST00000488596 HSD11B1LQ7Z5J1 315 aa2.39□□□□□ -2.03
CD46-215ENST00000488596 ZNF584Q8IVC4 421 aa2.39□□□□□ -2.03
CD46-215ENST00000488596 C9orf40Q8IXQ3 194 aa2.39□□□□□ -2.03
CD46-215ENST00000488596 GPR65Q8IYL9 337 aa2.39□□□□□ -2.03
CD46-215ENST00000488596 BPIFB2Q8N4F0 458 aa2.39□□□□□ -2.03
CD46-215ENST00000488596 ZBTB44Q8NCP5 570 aa2.39□□□□□ -2.03
CD46-215ENST00000488596 OR2T33Q8NG76 320 aa2.39□□□□□ -2.03
CD46-215ENST00000488596 M1APQ8TC57 530 aa2.39□□□□□ -2.03
CD46-215ENST00000488596 ARNTL2Q8WYA1 636 aa2.39□□□□□ -2.03
CD46-215ENST00000488596 PINX1Q96BK5 328 aaKnown RBP2.39□□□□□ -2.03
CD46-215ENST00000488596 CALHM2Q9HA72 323 aa2.39□□□□□ -2.03
CD46-215ENST00000488596 TNFRSF19Q9NS68 423 aa2.39□□□□□ -2.03
CD46-215ENST00000488596 ZNF275Q9NSD4 429 aaPredicted RBP2.39□□□□□ -2.03
CD46-215ENST00000488596 ISY1Q9ULR0 285 aaKnown RBP2.39□□□□□ -2.03
CD46-215ENST00000488596 GMPPBQ9Y5P6 360 aa2.39□□□□□ -2.03
CD46-215ENST00000488596 ZNF646O15015 1829 aaPredicted RBP2.38□□□□□ -2.03
CD46-215ENST00000488596 FAM220BPB1ANY3 271 aa2.38□□□□□ -2.03
CD46-215ENST00000488596 E9PLD3 99 aa2.38□□□□□ -2.03
CD46-215ENST00000488596 NUDT21O43809 227 aaKnown RBP2.38□□□□□ -2.03
CD46-215ENST00000488596 EFNA2O43921 213 aa2.38□□□□□ -2.03
CD46-215ENST00000488596 JAK2O60674 1132 aa2.38□□□□□ -2.03
CD46-215ENST00000488596 STX11O75558 287 aa2.38□□□□□ -2.03
CD46-215ENST00000488596 SCRG1O75711 98 aa2.38□□□□□ -2.03
CD46-215ENST00000488596 THRBP10828 461 aa2.38□□□□□ -2.03
CD46-215ENST00000488596 IGHV1-2P23083 117 aa2.38□□□□□ -2.03
CD46-215ENST00000488596 BDKRB1P46663 353 aa2.38□□□□□ -2.03
CD46-215ENST00000488596 MEOX2P50222 304 aa2.38□□□□□ -2.03
CD46-215ENST00000488596 NAPAP54920 295 aa2.38□□□□□ -2.03
CD46-215ENST00000488596 IGLV3-21P80748 117 aaPredicted RBP2.38□□□□□ -2.03
CD46-215ENST00000488596 ZNF154Q13106 437 aa2.38□□□□□ -2.03
CD46-215ENST00000488596 DPYSL3Q14195 570 aa2.38□□□□□ -2.03
CD46-215ENST00000488596 MAPK6Q16659 721 aa2.38□□□□□ -2.03
CD46-215ENST00000488596 USH1GQ495M9 461 aa2.38□□□□□ -2.03
CD46-215ENST00000488596 GLYR1Q49A26 553 aaPredicted RBP2.38□□□□□ -2.03
CD46-215ENST00000488596 ZNF311Q5JNZ3 666 aa2.38□□□□□ -2.03
CD46-215ENST00000488596 UTF1Q5T230 341 aa2.38□□□□□ -2.03
CD46-215ENST00000488596 UFSP1Q6NVU6 142 aa2.38□□□□□ -2.03
CD46-215ENST00000488596 SCYL2Q6P3W7 929 aa2.38□□□□□ -2.03
CD46-215ENST00000488596 NIPAL3Q6P499 406 aa2.38□□□□□ -2.03
CD46-215ENST00000488596 TMEM184AQ6ZMB5 413 aa2.38□□□□□ -2.03
CD46-215ENST00000488596 CENPUQ71F23 418 aa2.38□□□□□ -2.03
CD46-215ENST00000488596 GET4Q7L5D6 327 aaPredicted RBP2.38□□□□□ -2.03
CD46-215ENST00000488596 GRAMD2AQ8IUY3 354 aa2.38□□□□□ -2.03
CD46-215ENST00000488596 FBXO16Q8IX29 292 aaPredicted RBP2.38□□□□□ -2.03
CD46-215ENST00000488596 C11orf53Q8IXP5 236 aa2.38□□□□□ -2.03
CD46-215ENST00000488596 C16orf45Q96MC5 204 aaPredicted RBP2.38□□□□□ -2.03
CD46-215ENST00000488596 VPS35Q96QK1 796 aa2.38□□□□□ -2.03
CD46-215ENST00000488596 MRPL13Q9BYD1 178 aaKnown RBP2.38□□□□□ -2.03
CD46-215ENST00000488596 GSDMCQ9BYG8 508 aa2.38□□□□□ -2.03
CD46-215ENST00000488596 SLITRK2Q9H156 845 aa2.38□□□□□ -2.03
CD46-215ENST00000488596 DHX33Q9H6R0 707 aaKnown RBP2.38□□□□□ -2.03
CD46-215ENST00000488596 PALMDQ9NP74 551 aa2.38□□□□□ -2.03
CD46-215ENST00000488596 POLE3Q9NRF9 147 aa2.38□□□□□ -2.03
CD46-215ENST00000488596 HPF1Q9NWY4 346 aa2.38□□□□□ -2.03
CD46-215ENST00000488596 RDH8Q9NYR8 311 aa2.38□□□□□ -2.03
CD46-215ENST00000488596 DPM3Q9P2X0 92 aa2.38□□□□□ -2.03
CD46-215ENST00000488596 CLEC4EQ9ULY5 219 aa2.38□□□□□ -2.03
CD46-215ENST00000488596 MOKQ9UQ07 419 aa2.38□□□□□ -2.03
CD46-215ENST00000488596 EIF3LQ9Y262 564 aaKnown RBP2.38□□□□□ -2.03
CD46-215ENST00000488596 L3MBTL1Q9Y468 752 aa2.38□□□□□ -2.03
CD46-215ENST00000488596 MFHAS1Q9Y4C4 1052 aa2.38□□□□□ -2.03
CD46-215ENST00000488596 ANKRD30BQ9BXX2 1392 aa2.37□□□□□ -2.03
CD46-215ENST00000488596 KLF18A0A0U1RQI7 1052 aa2.37□□□□□ -2.03
CD46-215ENST00000488596 FCN1O00602 326 aa2.37□□□□□ -2.03
CD46-215ENST00000488596 RTL8CO15255 209 aa2.37□□□□□ -2.03
CD46-215ENST00000488596 STX7O15400 261 aaKnown RBP2.37□□□□□ -2.03
CD46-215ENST00000488596 RAMP1O60894 148 aa2.37□□□□□ -2.03
CD46-215ENST00000488596 ZNF254O75437 659 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms