RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 PRPF18Q99633 342 aaKnown RBP16.08■□□□□ 0.16
ITGB1-215ENST00000488494 G6PC3Q9BUM1 346 aa16.08■□□□□ 0.16
ITGB1-215ENST00000488494 CXorf36Q9H7Y0 433 aa16.08■□□□□ 0.16
ITGB1-215ENST00000488494 CALHM2Q9HA72 323 aa16.08■□□□□ 0.16
ITGB1-215ENST00000488494 ASIC5Q9NY37 505 aa16.08■□□□□ 0.16
ITGB1-215ENST00000488494 MRPS18CQ9Y3D5 142 aaKnown RBP16.08■□□□□ 0.16
ITGB1-215ENST00000488494 MED12Q93074 2177 aa16.07■□□□□ 0.16
ITGB1-215ENST00000488494 CREBBPQ92793 2442 aa16.07■□□□□ 0.16
ITGB1-215ENST00000488494 TMEM120BA0PK00 339 aa16.07■□□□□ 0.16
ITGB1-215ENST00000488494 CLCA1A8K7I4 914 aa16.07■□□□□ 0.16
ITGB1-215ENST00000488494 ERLIN1O75477 346 aa16.07■□□□□ 0.16
ITGB1-215ENST00000488494 KCNK2O95069 426 aa16.07■□□□□ 0.16
ITGB1-215ENST00000488494 SNUPNO95149 360 aaKnown RBP16.07■□□□□ 0.16
ITGB1-215ENST00000488494 OXSR1O95747 527 aaPredicted RBP16.07■□□□□ 0.16
ITGB1-215ENST00000488494 ANGPTL1O95841 491 aa16.07■□□□□ 0.16
ITGB1-215ENST00000488494 HMGN2P05204 90 aaKnown RBP16.07■□□□□ 0.16
ITGB1-215ENST00000488494 ZNF708P17019 499 aa16.07■□□□□ 0.16
ITGB1-215ENST00000488494 HK1P19367 917 aa16.07■□□□□ 0.16
ITGB1-215ENST00000488494 POU3F2P20265 443 aaPredicted RBP16.07■□□□□ 0.16
ITGB1-215ENST00000488494 CHMP24386 653 aa16.07■□□□□ 0.16
ITGB1-215ENST00000488494 UQCRC1P31930 480 aa16.07■□□□□ 0.16
ITGB1-215ENST00000488494 ASCL1P50553 236 aa16.07■□□□□ 0.16
ITGB1-215ENST00000488494 RPL14P50914 215 aaKnown RBP16.07■□□□□ 0.16
ITGB1-215ENST00000488494 DGKQP52824 942 aa16.07■□□□□ 0.16
ITGB1-215ENST00000488494 DLX5P56178 289 aa16.07■□□□□ 0.16
ITGB1-215ENST00000488494 C21orf58P58505 322 aa16.07■□□□□ 0.16
ITGB1-215ENST00000488494 KRTAP10-9P60411 292 aa16.07■□□□□ 0.16
ITGB1-215ENST00000488494 MYBPHQ13203 477 aa16.07■□□□□ 0.16
ITGB1-215ENST00000488494 STX3Q13277 289 aa16.07■□□□□ 0.16
ITGB1-215ENST00000488494 TP53BP2Q13625 1128 aa16.07■□□□□ 0.16
ITGB1-215ENST00000488494 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.07■□□□□ 0.16
ITGB1-215ENST00000488494 EXOSC6Q5RKV6 272 aaKnown RBP16.07■□□□□ 0.16
ITGB1-215ENST00000488494 CCNJQ5T5M9 372 aa16.07■□□□□ 0.16
ITGB1-215ENST00000488494 HHATQ5VTY9 493 aa16.07■□□□□ 0.16
ITGB1-215ENST00000488494 APOOLQ6UXV4 268 aa16.07■□□□□ 0.16
ITGB1-215ENST00000488494 GATSQ8NAP1 163 aa16.07■□□□□ 0.16
ITGB1-215ENST00000488494 OR56A1Q8NGH5 318 aa16.07■□□□□ 0.16
ITGB1-215ENST00000488494 DUSP19Q8WTR2 217 aa16.07■□□□□ 0.16
ITGB1-215ENST00000488494 CDS1Q92903 461 aa16.07■□□□□ 0.16
ITGB1-215ENST00000488494 COQ8BQ96D53 544 aa16.07■□□□□ 0.16
ITGB1-215ENST00000488494 C1GALT1C1Q96EU7 318 aa16.07■□□□□ 0.16
ITGB1-215ENST00000488494 BHLHE41Q9C0J9 482 aaPredicted RBP16.07■□□□□ 0.16
ITGB1-215ENST00000488494 PTGES2Q9H7Z7 377 aa16.07■□□□□ 0.16
ITGB1-215ENST00000488494 AKTIPQ9H8T0 292 aa16.07■□□□□ 0.16
ITGB1-215ENST00000488494 NEUROD4Q9HD90 331 aa16.07■□□□□ 0.16
ITGB1-215ENST00000488494 HAO1Q9UJM8 370 aa16.07■□□□□ 0.16
ITGB1-215ENST00000488494 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.07■□□□□ 0.16
ITGB1-215ENST00000488494 EEF1E1-BLOC1S5C9J1V9 151 aa16.06■□□□□ 0.16
ITGB1-215ENST00000488494 CFLARO15519 480 aa16.06■□□□□ 0.16
ITGB1-215ENST00000488494 EEF1E1O43324 174 aaKnown RBP16.06■□□□□ 0.16
ITGB1-215ENST00000488494 NGFRP08138 427 aa16.06■□□□□ 0.16
ITGB1-215ENST00000488494 SOAT1P35610 550 aa16.06■□□□□ 0.16
ITGB1-215ENST00000488494 AGFG1P52594 562 aaKnown RBP16.06■□□□□ 0.16
ITGB1-215ENST00000488494 DIO3P55073 304 aa16.06■□□□□ 0.16
ITGB1-215ENST00000488494 BST1Q10588 318 aa16.06■□□□□ 0.16
ITGB1-215ENST00000488494 SNTB1Q13884 538 aaKnown RBP16.06■□□□□ 0.16
ITGB1-215ENST00000488494 SMU1Q2TAY7 513 aa16.06■□□□□ 0.16
ITGB1-215ENST00000488494 PGS1Q32NB8 556 aa16.06■□□□□ 0.16
ITGB1-215ENST00000488494 LSM12Q3MHD2 195 aaKnown RBP16.06■□□□□ 0.16
ITGB1-215ENST00000488494 ZCCHC12Q6PEW1 402 aa16.06■□□□□ 0.16
ITGB1-215ENST00000488494 POMZP3Q6PJE2 187 aa16.06■□□□□ 0.16
ITGB1-215ENST00000488494 UBQLNLQ8IYU4 475 aa16.06■□□□□ 0.16
ITGB1-215ENST00000488494 KIRREL3Q8IZU9 778 aa16.06■□□□□ 0.16
ITGB1-215ENST00000488494 NATD1Q8N6N6 113 aa16.06■□□□□ 0.16
ITGB1-215ENST00000488494 OR5M1Q8NGP8 315 aa16.06■□□□□ 0.16
ITGB1-215ENST00000488494 OR4C3Q8NH37 302 aa16.06■□□□□ 0.16
ITGB1-215ENST00000488494 OR5AK3PQ8NH89 298 aa16.06■□□□□ 0.16
ITGB1-215ENST00000488494 PSMA8Q8TAA3 256 aa16.06■□□□□ 0.16
ITGB1-215ENST00000488494 SFXN5Q8TD22 340 aa16.06■□□□□ 0.16
ITGB1-215ENST00000488494 MGARPQ8TDB4 240 aa16.06■□□□□ 0.16
ITGB1-215ENST00000488494 SH3GL2Q99962 352 aa16.06■□□□□ 0.16
ITGB1-215ENST00000488494 DUSP26Q9BV47 211 aa16.06■□□□□ 0.16
ITGB1-215ENST00000488494 NUF2Q9BZD4 464 aa16.06■□□□□ 0.16
ITGB1-215ENST00000488494 MCCC2Q9HCC0 563 aa16.06■□□□□ 0.16
ITGB1-215ENST00000488494 CLCF1Q9UBD9 225 aa16.06■□□□□ 0.16
ITGB1-215ENST00000488494 ZNF629Q9UEG4 869 aaPredicted RBP16.06■□□□□ 0.16
ITGB1-215ENST00000488494 KCNN3Q9UGI6 736 aa16.06■□□□□ 0.16
ITGB1-215ENST00000488494 L3MBTL1Q9Y468 752 aa16.06■□□□□ 0.16
ITGB1-215ENST00000488494 INTS1Q8N201 2190 aaKnown RBP16.06■□□□□ 0.16
ITGB1-215ENST00000488494 IGLV3-32A0A0A0MS00 114 aa16.05■□□□□ 0.16
ITGB1-215ENST00000488494 ALG1L2C9J202 215 aa16.05■□□□□ 0.16
ITGB1-215ENST00000488494 TMIGD3P0DMS9 266 aaPredicted RBP16.05■□□□□ 0.16
ITGB1-215ENST00000488494 CTSSP25774 331 aa16.05■□□□□ 0.16
ITGB1-215ENST00000488494 CCT3P49368 545 aaKnown RBP16.05■□□□□ 0.16
ITGB1-215ENST00000488494 CLDN8P56748 225 aa16.05■□□□□ 0.16
ITGB1-215ENST00000488494 POU6F2P78424 691 aaPredicted RBP16.05■□□□□ 0.16
ITGB1-215ENST00000488494 CAMKMTQ7Z624 323 aa16.05■□□□□ 0.16
ITGB1-215ENST00000488494 ADGRE4PQ86SQ3 457 aa16.05■□□□□ 0.16
ITGB1-215ENST00000488494 GRAMD2AQ8IUY3 354 aa16.05■□□□□ 0.16
ITGB1-215ENST00000488494 FAM110BQ8TC76 370 aa16.05■□□□□ 0.16
ITGB1-215ENST00000488494 STACQ99469 402 aa16.05■□□□□ 0.16
ITGB1-215ENST00000488494 ZNF559Q9BR84 538 aa16.05■□□□□ 0.16
ITGB1-215ENST00000488494 BTBD2Q9BX70 525 aa16.05■□□□□ 0.16
ITGB1-215ENST00000488494 DUSP22Q9NRW4 184 aa16.05■□□□□ 0.16
ITGB1-215ENST00000488494 PNPOQ9NVS9 261 aa16.05■□□□□ 0.16
ITGB1-215ENST00000488494 FBXO34Q9NWN3 711 aa16.05■□□□□ 0.16
ITGB1-215ENST00000488494 FAF1Q9UNN5 650 aaPredicted RBP16.05■□□□□ 0.16
ITGB1-215ENST00000488494 ANKHD1Q8IWZ3 2542 aaKnown RBP16.05■□□□□ 0.16
ITGB1-215ENST00000488494 OR2M5A3KFT3 312 aa16.04■□□□□ 0.16
ITGB1-215ENST00000488494 ENO4A6NNW6 628 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms