RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 C2orf42Q9NWW7 574 aa5.98□□□□□ -1.45
SIK3-212ENST00000488337 IKZF3Q9UKT9 509 aa5.98□□□□□ -1.45
SIK3-212ENST00000488337 SLC35A3Q9Y2D2 325 aa5.98□□□□□ -1.45
SIK3-212ENST00000488337 BRWD1Q9NSI6 2320 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 ISM1B1AKI9 464 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 MASP2O00187 686 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 LANCL1O43813 399 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 PRAMEF2O60811 474 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 FZD7O75084 574 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 RHOP08100 348 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 GAAP10253 952 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 TXNP10599 105 aaKnown RBP5.97□□□□□ -1.45
SIK3-212ENST00000488337 ERCC2P18074 760 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 MAPK3P27361 379 aaPredicted RBP5.97□□□□□ -1.45
SIK3-212ENST00000488337 HOXA11P31270 313 aaPredicted RBP5.97□□□□□ -1.45
SIK3-212ENST00000488337 HTRA3P83110 453 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 ITKQ08881 620 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 BIKQ13323 160 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 CTBP1Q13363 440 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 SLC36A4Q6YBV0 504 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 TMUB2Q71RG4 321 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 KDELC2Q7Z4H8 507 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 CCDC117Q8IWD4 279 aaPredicted RBP5.97□□□□□ -1.45
SIK3-212ENST00000488337 NRSN1Q8IZ57 195 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 MMP21Q8N119 569 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 TMEM130Q8N3G9 435 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 RYBPQ8N488 228 aaPredicted RBP5.97□□□□□ -1.45
SIK3-212ENST00000488337 PNLDC1Q8NA58 520 aaKnown RBP5.97□□□□□ -1.45
SIK3-212ENST00000488337 NEK7Q8TDX7 302 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 ELMOD3Q96FG2 381 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 ZNF845Q96IR2 970 aaPredicted RBP5.97□□□□□ -1.45
SIK3-212ENST00000488337 PCYT2Q99447 389 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 MGLLQ99685 303 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 MRPL45Q9BRJ2 306 aaKnown RBP5.97□□□□□ -1.45
SIK3-212ENST00000488337 FSD1LQ9BXM9 530 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 ACSL6Q9UKU0 697 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 CFAP20Q9Y6A4 193 aaKnown RBP5.97□□□□□ -1.45
SIK3-212ENST00000488337 PTPRZ1P23471 2315 aaPredicted RBP5.97□□□□□ -1.45
SIK3-212ENST00000488337 TMEM72A0PK05 275 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 OR2AT4A6NND4 320 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 TPST2O60704 377 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 CDC14BO60729 498 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 KHDRBS3O75525 346 aaKnown RBP5.97□□□□□ -1.45
SIK3-212ENST00000488337 METTL15P1P0C7V9 234 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 XPAP23025 273 aaPredicted RBP5.97□□□□□ -1.45
SIK3-212ENST00000488337 MPZP25189 248 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 NFYBP25208 207 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 BDKRB1P46663 353 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 PTTG1IPP53801 180 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 PNLIPRP2P54317 469 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 PPP3R1P63098 170 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 SHC2P98077 582 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 ZP2Q05996 745 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 RBBP4Q09028 425 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 ADIGQ0VDE8 80 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 TSTQ16762 297 aaKnown RBP5.97□□□□□ -1.45
SIK3-212ENST00000488337 SLC36A2Q495M3 483 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 NCMAPQ5T1S8 102 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 OTUD1Q5VV17 481 aaPredicted RBP5.97□□□□□ -1.45
SIK3-212ENST00000488337 TRIQKQ629K1 86 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 WSCD1Q658N2 575 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 TCTN3Q6NUS6 607 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 MED27Q6P2C8 311 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 C9orf43Q8TAL5 461 aaPredicted RBP5.97□□□□□ -1.45
SIK3-212ENST00000488337 EXT2Q93063 718 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 TMEM74Q96NL1 305 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 ALG8Q9BVK2 526 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 POMKQ9H5K3 350 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 METTL17Q9H7H0 456 aaPredicted RBP5.97□□□□□ -1.45
SIK3-212ENST00000488337 TAS2R10Q9NYW0 307 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 SLAMF8Q9P0V8 285 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 NTMQ9P121 344 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 ATG4BQ9Y4P1 393 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 GREB1LQ9C091 1923 aaPredicted RBP5.97□□□□□ -1.45
SIK3-212ENST00000488337 TSTD3H0UI37 97 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 UBFD1O14562 309 aaKnown RBP5.97□□□□□ -1.45
SIK3-212ENST00000488337 RP2O75695 350 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 PRR35P0CG20 571 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 AKR1A1P14550 325 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 TYRP14679 529 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 HNF1AP20823 631 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 RAB10P61026 200 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 SOWAHAQ2M3V2 549 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 SLC25A52Q3SY17 297 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 ABHD13Q7L211 337 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 TMEM135Q86UB9 458 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 SLC41A1Q8IVJ1 513 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 REPS2Q8NFH8 660 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 NUDT10Q8NFP7 164 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 MTERF1Q99551 399 aaKnown RBP5.97□□□□□ -1.45
SIK3-212ENST00000488337 CNPPD1Q9BV87 410 aa5.97□□□□□ -1.45
SIK3-212ENST00000488337 FAM95CA0A1B0GW59 222 aa5.96□□□□□ -1.45
SIK3-212ENST00000488337 NR5A2O00482 541 aa5.96□□□□□ -1.45
SIK3-212ENST00000488337 ANXA9O76027 345 aa5.96□□□□□ -1.45
SIK3-212ENST00000488337 MT-ND4LP03901 98 aa5.96□□□□□ -1.45
SIK3-212ENST00000488337 CTXN2P0C2S0 81 aa5.96□□□□□ -1.45
SIK3-212ENST00000488337 SIM1P81133 766 aaPredicted RBP5.96□□□□□ -1.45
SIK3-212ENST00000488337 CHRNB3Q05901 458 aa5.96□□□□□ -1.45
SIK3-212ENST00000488337 ISXQ2M1V0 245 aa5.96□□□□□ -1.45
SIK3-212ENST00000488337 SLC39A12Q504Y0 691 aa5.96□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms