RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 MYLK2Q9H1R3 596 aa14.4□□□□□ -0.1
C9orf3-219ENST00000488186 EFCAB1Q9HAE3 211 aa14.4□□□□□ -0.1
C9orf3-219ENST00000488186 CACYBPQ9HB71 228 aaKnown RBP14.4□□□□□ -0.1
C9orf3-219ENST00000488186 SLC25A37Q9NYZ2 338 aa14.4□□□□□ -0.1
C9orf3-219ENST00000488186 CALML5Q9NZT1 146 aa14.4□□□□□ -0.1
C9orf3-219ENST00000488186 MKLN1Q9UL63 735 aa14.4□□□□□ -0.1
C9orf3-219ENST00000488186 NPIPA1Q9UND3 350 aa14.4□□□□□ -0.1
C9orf3-219ENST00000488186 WDR45Q9Y484 360 aa14.4□□□□□ -0.1
C9orf3-219ENST00000488186 J3QKU1 62 aa14.39□□□□□ -0.11
C9orf3-219ENST00000488186 AIM2O14862 343 aa14.39□□□□□ -0.11
C9orf3-219ENST00000488186 NDUFB5O43674 189 aa14.39□□□□□ -0.11
C9orf3-219ENST00000488186 FADS1O60427 444 aa14.39□□□□□ -0.11
C9orf3-219ENST00000488186 TRIM3O75382 744 aaPredicted RBP14.39□□□□□ -0.11
C9orf3-219ENST00000488186 TRAPPC6AO75865 159 aa14.39□□□□□ -0.11
C9orf3-219ENST00000488186 OXSR1O95747 527 aaPredicted RBP14.39□□□□□ -0.11
C9orf3-219ENST00000488186 C1QCP02747 245 aa14.39□□□□□ -0.11
C9orf3-219ENST00000488186 ELAVL4P26378 380 aaKnown RBP14.39□□□□□ -0.11
C9orf3-219ENST00000488186 DCTP40126 519 aa14.39□□□□□ -0.11
C9orf3-219ENST00000488186 ATP12AP54707 1039 aa14.39□□□□□ -0.11
C9orf3-219ENST00000488186 FOXK1P85037 733 aa14.39□□□□□ -0.11
C9orf3-219ENST00000488186 C17orf67Q0P5P2 114 aa14.39□□□□□ -0.11
C9orf3-219ENST00000488186 CAPRIN1Q14444 709 aaKnown RBP14.39□□□□□ -0.11
C9orf3-219ENST00000488186 SLC10A1Q14973 349 aa14.39□□□□□ -0.11
C9orf3-219ENST00000488186 SYPL1Q16563 259 aa14.39□□□□□ -0.11
C9orf3-219ENST00000488186 HEPHL1Q6MZM0 1159 aa14.39□□□□□ -0.11
C9orf3-219ENST00000488186 MARCH3Q86UD3 253 aa14.39□□□□□ -0.11
C9orf3-219ENST00000488186 ATCAYQ86WG3 371 aa14.39□□□□□ -0.11
C9orf3-219ENST00000488186 MSRB3Q8IXL7 192 aa14.39□□□□□ -0.11
C9orf3-219ENST00000488186 OR4K17Q8NGC6 315 aa14.39□□□□□ -0.11
C9orf3-219ENST00000488186 OR4C3Q8NH37 302 aa14.39□□□□□ -0.11
C9orf3-219ENST00000488186 NR4A3Q92570 626 aa14.39□□□□□ -0.11
C9orf3-219ENST00000488186 MIB2Q96AX9 1013 aa14.39□□□□□ -0.11
C9orf3-219ENST00000488186 LRRC58Q96CX6 371 aa14.39□□□□□ -0.11
C9orf3-219ENST00000488186 RCN3Q96D15 328 aa14.39□□□□□ -0.11
C9orf3-219ENST00000488186 ANKRD27Q96NW4 1050 aa14.39□□□□□ -0.11
C9orf3-219ENST00000488186 GNRHR2Q96P88 292 aa14.39□□□□□ -0.11
C9orf3-219ENST00000488186 DEFB127Q9H1M4 99 aa14.39□□□□□ -0.11
C9orf3-219ENST00000488186 TSPAN10Q9H1Z9 355 aaPredicted RBP14.39□□□□□ -0.11
C9orf3-219ENST00000488186 LDAHQ9H6V9 325 aa14.39□□□□□ -0.11
C9orf3-219ENST00000488186 EXO5Q9H790 373 aa14.39□□□□□ -0.11
C9orf3-219ENST00000488186 PROK2Q9HC23 129 aa14.39□□□□□ -0.11
C9orf3-219ENST00000488186 POLE3Q9NRF9 147 aa14.39□□□□□ -0.11
C9orf3-219ENST00000488186 FLRT3Q9NZU0 649 aa14.39□□□□□ -0.11
C9orf3-219ENST00000488186 NTNG1Q9Y2I2 539 aa14.39□□□□□ -0.11
C9orf3-219ENST00000488186 WIF1Q9Y5W5 379 aa14.39□□□□□ -0.11
C9orf3-219ENST00000488186 GCN1Q92616 2671 aaKnown RBP14.38□□□□□ -0.11
C9orf3-219ENST00000488186 ESPL1Q14674 2120 aa14.38□□□□□ -0.11
C9orf3-219ENST00000488186 NPIPA5A0A0B4J1W7 369 aa14.38□□□□□ -0.11
C9orf3-219ENST00000488186 NPIPA7E9PJI5 369 aa14.38□□□□□ -0.11
C9orf3-219ENST00000488186 GTPBP1O00178 669 aaKnown RBP14.38□□□□□ -0.11
C9orf3-219ENST00000488186 CDC40O60508 579 aaKnown RBP eCLIP14.38□□□□□ -0.11
C9orf3-219ENST00000488186 FCMRO60667 390 aa14.38□□□□□ -0.11
C9orf3-219ENST00000488186 CBR3O75828 277 aa14.38□□□□□ -0.11
C9orf3-219ENST00000488186 H6PDO95479 791 aa14.38□□□□□ -0.11
C9orf3-219ENST00000488186 ANGPTL1O95841 491 aa14.38□□□□□ -0.11
C9orf3-219ENST00000488186 NGFRP08138 427 aa14.38□□□□□ -0.11
C9orf3-219ENST00000488186 NPIPA8P0DM63 369 aa14.38□□□□□ -0.11
C9orf3-219ENST00000488186 GDF1P27539 372 aa14.38□□□□□ -0.11
C9orf3-219ENST00000488186 PRDX6P30041 224 aa14.38□□□□□ -0.11
C9orf3-219ENST00000488186 CRISP3P54108 245 aa14.38□□□□□ -0.11
C9orf3-219ENST00000488186 KRTCAP3Q53RY4 240 aa14.38□□□□□ -0.11
C9orf3-219ENST00000488186 GCNT6Q5T4J0 391 aa14.38□□□□□ -0.11
C9orf3-219ENST00000488186 TIGD3Q6B0B8 471 aa14.38□□□□□ -0.11
C9orf3-219ENST00000488186 OR5M10Q6IEU7 315 aa14.38□□□□□ -0.11
C9orf3-219ENST00000488186 MTERF4Q7Z6M4 381 aaKnown RBP14.38□□□□□ -0.11
C9orf3-219ENST00000488186 ZAR1Q86SH2 424 aa14.38□□□□□ -0.11
C9orf3-219ENST00000488186 PLCZ1Q86YW0 608 aa14.38□□□□□ -0.11
C9orf3-219ENST00000488186 TREML1Q86YW5 311 aa14.38□□□□□ -0.11
C9orf3-219ENST00000488186 ANKFN1Q8N957 763 aa14.38□□□□□ -0.11
C9orf3-219ENST00000488186 DUSP19Q8WTR2 217 aa14.38□□□□□ -0.11
C9orf3-219ENST00000488186 MTHFD2LQ9H903 347 aaPredicted RBP14.38□□□□□ -0.11
C9orf3-219ENST00000488186 SEC14L3Q9UDX4 400 aa14.38□□□□□ -0.11
C9orf3-219ENST00000488186 SVILO95425 2214 aa14.38□□□□□ -0.11
C9orf3-219ENST00000488186 UBR5O95071 2799 aaPredicted RBP14.38□□□□□ -0.11
C9orf3-219ENST00000488186 TRBV5-3A0A0A0MS03 114 aa14.37□□□□□ -0.11
C9orf3-219ENST00000488186 ALG1L2C9J202 215 aa14.37□□□□□ -0.11
C9orf3-219ENST00000488186 SNPHO15079 494 aa14.37□□□□□ -0.11
C9orf3-219ENST00000488186 PDE9AO76083 593 aa14.37□□□□□ -0.11
C9orf3-219ENST00000488186 GLSO94925 669 aaPredicted RBP14.37□□□□□ -0.11
C9orf3-219ENST00000488186 BCHEP06276 602 aa14.37□□□□□ -0.11
C9orf3-219ENST00000488186 EDN3P14138 238 aa14.37□□□□□ -0.11
C9orf3-219ENST00000488186 HOXB9P17482 250 aaPredicted RBP14.37□□□□□ -0.11
C9orf3-219ENST00000488186 ENDOUP21128 410 aaKnown RBP14.37□□□□□ -0.11
C9orf3-219ENST00000488186 PTGDSP41222 190 aa14.37□□□□□ -0.11
C9orf3-219ENST00000488186 MAGEA5P43359 124 aa14.37□□□□□ -0.11
C9orf3-219ENST00000488186 MVDP53602 400 aa14.37□□□□□ -0.11
C9orf3-219ENST00000488186 MTPNP58546 118 aa14.37□□□□□ -0.11
C9orf3-219ENST00000488186 RBPJQ06330 500 aa14.37□□□□□ -0.11
C9orf3-219ENST00000488186 FOXO1Q12778 655 aa14.37□□□□□ -0.11
C9orf3-219ENST00000488186 CYP51A1Q16850 503 aa14.37□□□□□ -0.11
C9orf3-219ENST00000488186 RNFT1Q5M7Z0 435 aa14.37□□□□□ -0.11
C9orf3-219ENST00000488186 BNC2Q6ZN30 1099 aaPredicted RBP14.37□□□□□ -0.11
C9orf3-219ENST00000488186 LRRC74BQ6ZQY2 392 aa14.37□□□□□ -0.11
C9orf3-219ENST00000488186 MISPQ8IVT2 679 aa14.37□□□□□ -0.11
C9orf3-219ENST00000488186 ZNF619Q8N2I2 560 aa14.37□□□□□ -0.11
C9orf3-219ENST00000488186 FAM109AQ8N4B1 249 aa14.37□□□□□ -0.11
C9orf3-219ENST00000488186 TMEM251Q8N6I4 163 aa14.37□□□□□ -0.11
C9orf3-219ENST00000488186 GATSQ8NAP1 163 aa14.37□□□□□ -0.11
C9orf3-219ENST00000488186 GALNT11Q8NCW6 608 aa14.37□□□□□ -0.11
C9orf3-219ENST00000488186 PHOSPHO1Q8TCT1 267 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms