RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 ANKRD49Q8WVL7 239 aa2.85□□□□□ -1.95
HMGB1P36-201ENST00000487709 CASD1Q96PB1 797 aa2.85□□□□□ -1.95
HMGB1P36-201ENST00000487709 PAXXQ9BUH6 204 aa2.85□□□□□ -1.95
HMGB1P36-201ENST00000487709 NANSQ9NR45 359 aa2.85□□□□□ -1.95
HMGB1P36-201ENST00000487709 ZNF275Q9NSD4 429 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P36-201ENST00000487709 CYTH4Q9UIA0 394 aa2.85□□□□□ -1.95
HMGB1P36-201ENST00000487709 ISY1Q9ULR0 285 aaKnown RBP2.85□□□□□ -1.95
HMGB1P36-201ENST00000487709 KLF2Q9Y5W3 355 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P36-201ENST00000487709 SPACA6W5XKT8 324 aa2.85□□□□□ -1.95
HMGB1P36-201ENST00000487709 AGRNO00468 2067 aa2.84□□□□□ -1.95
HMGB1P36-201ENST00000487709 E9PLD3 99 aa2.84□□□□□ -1.95
HMGB1P36-201ENST00000487709 IMPA2O14732 288 aa2.84□□□□□ -1.95
HMGB1P36-201ENST00000487709 PHOX2AO14813 284 aa2.84□□□□□ -1.95
HMGB1P36-201ENST00000487709 JAK2O60674 1132 aa2.84□□□□□ -1.95
HMGB1P36-201ENST00000487709 SRSF10O75494 262 aaKnown RBP2.84□□□□□ -1.95
HMGB1P36-201ENST00000487709 AK1P00568 194 aa2.84□□□□□ -1.95
HMGB1P36-201ENST00000487709 JCHAINP01591 159 aa2.84□□□□□ -1.95
HMGB1P36-201ENST00000487709 KRT6BP04259 564 aa2.84□□□□□ -1.95
HMGB1P36-201ENST00000487709 ZCCHC18P0CG32 403 aa2.84□□□□□ -1.95
HMGB1P36-201ENST00000487709 IDSP22304 550 aa2.84□□□□□ -1.95
HMGB1P36-201ENST00000487709 CYP2F1P24903 491 aa2.84□□□□□ -1.95
HMGB1P36-201ENST00000487709 HTR2AP28223 471 aa2.84□□□□□ -1.95
HMGB1P36-201ENST00000487709 UGT1A3P35503 534 aa2.84□□□□□ -1.95
HMGB1P36-201ENST00000487709 MDH2P40926 338 aaKnown RBP2.84□□□□□ -1.95
HMGB1P36-201ENST00000487709 PTGFRP43088 359 aa2.84□□□□□ -1.95
HMGB1P36-201ENST00000487709 KRT6CP48668 564 aa2.84□□□□□ -1.95
HMGB1P36-201ENST00000487709 BPIFB3P59826 476 aa2.84□□□□□ -1.95
HMGB1P36-201ENST00000487709 ERVPABLB-1P60509 514 aa2.84□□□□□ -1.95
HMGB1P36-201ENST00000487709 RPL32P62910 135 aaKnown RBP2.84□□□□□ -1.95
HMGB1P36-201ENST00000487709 NUCB2P80303 420 aa2.84□□□□□ -1.95
HMGB1P36-201ENST00000487709 FUT7Q11130 342 aa2.84□□□□□ -1.95
HMGB1P36-201ENST00000487709 CDKN3Q16667 212 aa2.84□□□□□ -1.95
HMGB1P36-201ENST00000487709 ADPRMQ3LIE5 342 aa2.84□□□□□ -1.95
HMGB1P36-201ENST00000487709 GLYR1Q49A26 553 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P36-201ENST00000487709 RIPPLY2Q5TAB7 128 aa2.84□□□□□ -1.95
HMGB1P36-201ENST00000487709 SLC22A10Q63ZE4 541 aa2.84□□□□□ -1.95
HMGB1P36-201ENST00000487709 CCBE1Q6UXH8 406 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P36-201ENST00000487709 HSD11B1LQ7Z5J1 315 aa2.84□□□□□ -1.95
HMGB1P36-201ENST00000487709 ZNF573Q86YE8 665 aa2.84□□□□□ -1.95
HMGB1P36-201ENST00000487709 BPIFB2Q8N4F0 458 aa2.84□□□□□ -1.95
HMGB1P36-201ENST00000487709 LINC00612Q8N6U2 182 aa2.84□□□□□ -1.95
HMGB1P36-201ENST00000487709 MCHR2Q969V1 340 aa2.84□□□□□ -1.95
HMGB1P36-201ENST00000487709 TBC1D31Q96DN5 1066 aa2.84□□□□□ -1.95
HMGB1P36-201ENST00000487709 TMEM80Q96HE8 168 aa2.84□□□□□ -1.95
HMGB1P36-201ENST00000487709 MAGEB18Q96M61 343 aa2.84□□□□□ -1.95
HMGB1P36-201ENST00000487709 KIR2DL4Q99706 377 aa2.84□□□□□ -1.95
HMGB1P36-201ENST00000487709 THUMPD2Q9BTF0 503 aaKnown RBP2.84□□□□□ -1.95
HMGB1P36-201ENST00000487709 SLC25A51Q9H1U9 297 aa2.84□□□□□ -1.95
HMGB1P36-201ENST00000487709 RIBC2Q9H4K1 309 aa2.84□□□□□ -1.95
HMGB1P36-201ENST00000487709 ISG20L2Q9H9L3 353 aaKnown RBP2.84□□□□□ -1.95
HMGB1P36-201ENST00000487709 PNO1Q9NRX1 252 aaKnown RBP2.84□□□□□ -1.95
HMGB1P36-201ENST00000487709 MRPL39Q9NYK5 338 aaKnown RBP2.84□□□□□ -1.95
HMGB1P36-201ENST00000487709 AIPL1Q9NZN9 384 aa2.84□□□□□ -1.95
HMGB1P36-201ENST00000487709 KLHL21Q9UJP4 597 aa2.84□□□□□ -1.95
HMGB1P36-201ENST00000487709 AP1M2Q9Y6Q5 423 aa2.84□□□□□ -1.95
HMGB1P36-201ENST00000487709 CARMIL1Q5VZK9 1371 aa2.84□□□□□ -1.96
HMGB1P36-201ENST00000487709 PPIAL4CA0A0B4J2A2 164 aa2.83□□□□□ -1.96
HMGB1P36-201ENST00000487709 SMIM28A0A1B0GU29 152 aa2.83□□□□□ -1.96
HMGB1P36-201ENST00000487709 DHRS7CA6NNS2 312 aa2.83□□□□□ -1.96
HMGB1P36-201ENST00000487709 A8MUI8 341 aa2.83□□□□□ -1.96
HMGB1P36-201ENST00000487709 APBB3O95704 486 aa2.83□□□□□ -1.96
HMGB1P36-201ENST00000487709 PTBP3O95758 552 aaKnown RBP2.83□□□□□ -1.96
HMGB1P36-201ENST00000487709 CD55P08174 381 aa2.83□□□□□ -1.96
HMGB1P36-201ENST00000487709 SLC35E2P0CK97 266 aa2.83□□□□□ -1.96
HMGB1P36-201ENST00000487709 DNAH10OSP0CZ25 163 aa2.83□□□□□ -1.96
HMGB1P36-201ENST00000487709 PPIAL4GP0DN37 164 aa2.83□□□□□ -1.96
HMGB1P36-201ENST00000487709 CLUP10909 449 aa2.83□□□□□ -1.96
HMGB1P36-201ENST00000487709 FUT1P19526 365 aa2.83□□□□□ -1.96
HMGB1P36-201ENST00000487709 IGHV1-2P23083 117 aa2.83□□□□□ -1.96
HMGB1P36-201ENST00000487709 PTBP1P26599 531 aaKnown RBP eCLIP2.83□□□□□ -1.96
HMGB1P36-201ENST00000487709 ADRA1AP35348 466 aa2.83□□□□□ -1.96
HMGB1P36-201ENST00000487709 CXCL6P80162 114 aa2.83□□□□□ -1.96
HMGB1P36-201ENST00000487709 RGS1Q08116 209 aa2.83□□□□□ -1.96
HMGB1P36-201ENST00000487709 UTF1Q5T230 341 aa2.83□□□□□ -1.96
HMGB1P36-201ENST00000487709 OR5M10Q6IEU7 315 aa2.83□□□□□ -1.96
HMGB1P36-201ENST00000487709 SLC39A4Q6P5W5 647 aa2.83□□□□□ -1.96
HMGB1P36-201ENST00000487709 ISLR2Q6UXK2 745 aa2.83□□□□□ -1.96
HMGB1P36-201ENST00000487709 TFAP2EQ6VUC0 442 aa2.83□□□□□ -1.96
HMGB1P36-201ENST00000487709 ANKRD37Q7Z713 158 aa2.83□□□□□ -1.96
HMGB1P36-201ENST00000487709 HSCBQ8IWL3 235 aa2.83□□□□□ -1.96
HMGB1P36-201ENST00000487709 PRR22Q8IZ63 422 aa2.83□□□□□ -1.96
HMGB1P36-201ENST00000487709 MTURNQ8N3F0 131 aa2.83□□□□□ -1.96
HMGB1P36-201ENST00000487709 CSNK1A1LQ8N752 337 aa2.83□□□□□ -1.96
HMGB1P36-201ENST00000487709 OR10T2Q8NGX3 314 aa2.83□□□□□ -1.96
HMGB1P36-201ENST00000487709 GTSF1Q8WW33 167 aa2.83□□□□□ -1.96
HMGB1P36-201ENST00000487709 MYLPFQ96A32 169 aa2.83□□□□□ -1.96
HMGB1P36-201ENST00000487709 ADIPOR1Q96A54 375 aa2.83□□□□□ -1.96
HMGB1P36-201ENST00000487709 FAF2Q96CS3 445 aa2.83□□□□□ -1.96
HMGB1P36-201ENST00000487709 MRPL38Q96DV4 380 aaKnown RBP2.83□□□□□ -1.96
HMGB1P36-201ENST00000487709 DHTKD1Q96HY7 919 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P36-201ENST00000487709 MAPKAP1Q9BPZ7 522 aa2.83□□□□□ -1.96
HMGB1P36-201ENST00000487709 DPH7Q9BTV6 452 aa2.83□□□□□ -1.96
HMGB1P36-201ENST00000487709 TPPP3Q9BW30 176 aa2.83□□□□□ -1.96
HMGB1P36-201ENST00000487709 TSSK1BQ9BXA7 367 aa2.83□□□□□ -1.96
HMGB1P36-201ENST00000487709 MIEF1Q9NQG6 463 aa2.83□□□□□ -1.96
HMGB1P36-201ENST00000487709 TNFRSF19Q9NS68 423 aa2.83□□□□□ -1.96
HMGB1P36-201ENST00000487709 APOBEC3BQ9UH17 382 aaKnown RBP2.83□□□□□ -1.96
HMGB1P36-201ENST00000487709 PDE10AQ9Y233 779 aa2.83□□□□□ -1.96
HMGB1P36-201ENST00000487709 DDX49Q9Y6V7 483 aaKnown RBP2.83□□□□□ -1.96
HMGB1P36-201ENST00000487709 IGHV3-35A0A0C4DH35 117 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms