RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 RNF212BA8MTL3 300 aa17.39■□□□□ 0.37
SMPDL3A-202ENST00000487215 ULK1O75385 1050 aa17.39■□□□□ 0.37
SMPDL3A-202ENST00000487215 PSMG1O95456 288 aa17.39■□□□□ 0.37
SMPDL3A-202ENST00000487215 ANGPTL1O95841 491 aa17.39■□□□□ 0.37
SMPDL3A-202ENST00000487215 NCBP2P52298 156 aaKnown RBP eCLIP17.39■□□□□ 0.37
SMPDL3A-202ENST00000487215 ZNF844Q08AG5 666 aa17.39■□□□□ 0.37
SMPDL3A-202ENST00000487215 C17orf67Q0P5P2 114 aa17.39■□□□□ 0.37
SMPDL3A-202ENST00000487215 CTU2Q2VPK5 515 aaKnown RBP17.39■□□□□ 0.37
SMPDL3A-202ENST00000487215 UNC50Q53HI1 259 aa17.39■□□□□ 0.37
SMPDL3A-202ENST00000487215 HMBOX1Q6NT76 420 aa17.39■□□□□ 0.37
SMPDL3A-202ENST00000487215 GALNT18Q6P9A2 607 aa17.39■□□□□ 0.37
SMPDL3A-202ENST00000487215 APOOLQ6UXV4 268 aa17.39■□□□□ 0.37
SMPDL3A-202ENST00000487215 RAB3IL1Q8TBN0 382 aa17.39■□□□□ 0.37
SMPDL3A-202ENST00000487215 C11orf24Q96F05 449 aaPredicted RBP17.39■□□□□ 0.37
SMPDL3A-202ENST00000487215 ADGRG7Q96K78 797 aa17.39■□□□□ 0.37
SMPDL3A-202ENST00000487215 ZNF382Q96SR6 550 aa17.39■□□□□ 0.37
SMPDL3A-202ENST00000487215 FUT8Q9BYC5 575 aa17.39■□□□□ 0.37
SMPDL3A-202ENST00000487215 TBL1XR1Q9BZK7 514 aa17.39■□□□□ 0.37
SMPDL3A-202ENST00000487215 OR10A4Q9H209 315 aa17.39■□□□□ 0.37
SMPDL3A-202ENST00000487215 FANCFQ9NPI8 374 aa17.39■□□□□ 0.37
SMPDL3A-202ENST00000487215 MRTO4Q9UKD2 239 aaKnown RBP17.39■□□□□ 0.37
SMPDL3A-202ENST00000487215 NFU1Q9UMS0 254 aa17.39■□□□□ 0.37
SMPDL3A-202ENST00000487215 VDAC3Q9Y277 283 aa17.39■□□□□ 0.37
SMPDL3A-202ENST00000487215 GPR52Q9Y2T5 361 aa17.39■□□□□ 0.37
SMPDL3A-202ENST00000487215 OVOL3O00110 214 aa17.38■□□□□ 0.37
SMPDL3A-202ENST00000487215 UPK1AO00322 258 aa17.38■□□□□ 0.37
SMPDL3A-202ENST00000487215 SUPT7LO94864 414 aa17.38■□□□□ 0.37
SMPDL3A-202ENST00000487215 SLITRK5O94991 958 aa17.38■□□□□ 0.37
SMPDL3A-202ENST00000487215 UTS2O95399 124 aa17.38■□□□□ 0.37
SMPDL3A-202ENST00000487215 ZNF17P17021 662 aa17.38■□□□□ 0.37
SMPDL3A-202ENST00000487215 PSMB1P20618 241 aaKnown RBP17.38■□□□□ 0.37
SMPDL3A-202ENST00000487215 DDCP20711 480 aa17.38■□□□□ 0.37
SMPDL3A-202ENST00000487215 HMOX2P30519 316 aa17.38■□□□□ 0.37
SMPDL3A-202ENST00000487215 PRR5P85299 388 aa17.38■□□□□ 0.37
SMPDL3A-202ENST00000487215 SLC7A5Q01650 507 aa17.38■□□□□ 0.37
SMPDL3A-202ENST00000487215 BEND4Q6ZU67 534 aa17.38■□□□□ 0.37
SMPDL3A-202ENST00000487215 GPRIN3Q6ZVF9 776 aa17.38■□□□□ 0.37
SMPDL3A-202ENST00000487215 OR2L13Q8N349 312 aa17.38■□□□□ 0.37
SMPDL3A-202ENST00000487215 LILRB1Q8NHL6 650 aaPredicted RBP17.38■□□□□ 0.37
SMPDL3A-202ENST00000487215 METTL6Q8TCB7 284 aa17.38■□□□□ 0.37
SMPDL3A-202ENST00000487215 PAFAH2Q99487 392 aa17.38■□□□□ 0.37
SMPDL3A-202ENST00000487215 LMF2Q9BU23 707 aaKnown RBP17.38■□□□□ 0.37
SMPDL3A-202ENST00000487215 REG4Q9BYZ8 158 aa17.38■□□□□ 0.37
SMPDL3A-202ENST00000487215 DDX18Q9NVP1 670 aaKnown RBP17.38■□□□□ 0.37
SMPDL3A-202ENST00000487215 MCTS1Q9ULC4 181 aaKnown RBP17.38■□□□□ 0.37
SMPDL3A-202ENST00000487215 CXCL13O43927 109 aa17.37■□□□□ 0.37
SMPDL3A-202ENST00000487215 ANXA4P09525 319 aaPredicted RBP17.37■□□□□ 0.37
SMPDL3A-202ENST00000487215 GSTM5P46439 218 aa17.37■□□□□ 0.37
SMPDL3A-202ENST00000487215 SERPINB9P50453 376 aa17.37■□□□□ 0.37
SMPDL3A-202ENST00000487215 PSMD4P55036 377 aaKnown RBP17.37■□□□□ 0.37
SMPDL3A-202ENST00000487215 BTKQ06187 659 aa17.37■□□□□ 0.37
SMPDL3A-202ENST00000487215 C2orf80Q0P641 193 aa17.37■□□□□ 0.37
SMPDL3A-202ENST00000487215 ZNHIT3Q15649 155 aaPredicted RBP17.37■□□□□ 0.37
SMPDL3A-202ENST00000487215 ETFDHQ16134 617 aa17.37■□□□□ 0.37
SMPDL3A-202ENST00000487215 GRAMD1BQ3KR37 738 aa17.37■□□□□ 0.37
SMPDL3A-202ENST00000487215 ZNF678Q5SXM1 525 aa17.37■□□□□ 0.37
SMPDL3A-202ENST00000487215 TEX35Q5T0J7 233 aa17.37■□□□□ 0.37
SMPDL3A-202ENST00000487215 ALKBH2Q6NS38 261 aa17.37■□□□□ 0.37
SMPDL3A-202ENST00000487215 ADAM5Q6NVV9 412 aa17.37■□□□□ 0.37
SMPDL3A-202ENST00000487215 GALNT10Q86SR1 603 aa17.37■□□□□ 0.37
SMPDL3A-202ENST00000487215 STK32CQ86UX6 486 aa17.37■□□□□ 0.37
SMPDL3A-202ENST00000487215 RELL1Q8IUW5 271 aa17.37■□□□□ 0.37
SMPDL3A-202ENST00000487215 WDR75Q8IWA0 830 aaKnown RBP17.37■□□□□ 0.37
SMPDL3A-202ENST00000487215 PHC2Q8IXK0 858 aa17.37■□□□□ 0.37
SMPDL3A-202ENST00000487215 CDC26Q8NHZ8 85 aa17.37■□□□□ 0.37
SMPDL3A-202ENST00000487215 TRMT61AQ96FX7 289 aaKnown RBP17.37■□□□□ 0.37
SMPDL3A-202ENST00000487215 TMEM237Q96Q45 408 aa17.37■□□□□ 0.37
SMPDL3A-202ENST00000487215 NPAS1Q99742 590 aa17.37■□□□□ 0.37
SMPDL3A-202ENST00000487215 GLIPR2Q9H4G4 154 aa17.37■□□□□ 0.37
SMPDL3A-202ENST00000487215 PAQR5Q9NXK6 330 aaPredicted RBP17.37■□□□□ 0.37
SMPDL3A-202ENST00000487215 STOML1Q9UBI4 398 aa17.37■□□□□ 0.37
SMPDL3A-202ENST00000487215 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.37■□□□□ 0.37
SMPDL3A-202ENST00000487215 MXRA5Q9NR99 2828 aa17.37■□□□□ 0.37
SMPDL3A-202ENST00000487215 SONP18583 2426 aaKnown RBP17.36■□□□□ 0.37
SMPDL3A-202ENST00000487215 GXYLT2A0PJZ3 443 aa17.36■□□□□ 0.37
SMPDL3A-202ENST00000487215 TRIM49D1C9J1S8 452 aa17.36■□□□□ 0.37
SMPDL3A-202ENST00000487215 SYNGR4O95473 234 aa17.36■□□□□ 0.37
SMPDL3A-202ENST00000487215 IGKV1D-16P01601 117 aa17.36■□□□□ 0.37
SMPDL3A-202ENST00000487215 OPN1LWP04000 364 aa17.36■□□□□ 0.37
SMPDL3A-202ENST00000487215 SOD3P08294 240 aa17.36■□□□□ 0.37
SMPDL3A-202ENST00000487215 AGTR1P30556 359 aa17.36■□□□□ 0.37
SMPDL3A-202ENST00000487215 ZNF763Q0D2J5 394 aa17.36■□□□□ 0.37
SMPDL3A-202ENST00000487215 GTPBP8Q8N3Z3 284 aaPredicted RBP17.36■□□□□ 0.37
SMPDL3A-202ENST00000487215 SLC9A6Q92581 669 aa17.36■□□□□ 0.37
SMPDL3A-202ENST00000487215 S100PBPQ96BU1 408 aa17.36■□□□□ 0.37
SMPDL3A-202ENST00000487215 ELP4Q96EB1 424 aa17.36■□□□□ 0.37
SMPDL3A-202ENST00000487215 TACO1Q9BSH4 297 aaKnown RBP17.36■□□□□ 0.37
SMPDL3A-202ENST00000487215 C12orf49Q9H741 205 aa17.36■□□□□ 0.37
SMPDL3A-202ENST00000487215 GLRX2Q9NS18 164 aa17.36■□□□□ 0.37
SMPDL3A-202ENST00000487215 SIRT5Q9NXA8 310 aa17.36■□□□□ 0.37
SMPDL3A-202ENST00000487215 GRID1Q9ULK0 1009 aa17.36■□□□□ 0.37
SMPDL3A-202ENST00000487215 RNF115Q9Y4L5 304 aa17.36■□□□□ 0.37
SMPDL3A-202ENST00000487215 PCNX3Q9H6A9 2034 aa17.36■□□□□ 0.37
SMPDL3A-202ENST00000487215 CUBNO60494 3623 aa17.35■□□□□ 0.37
SMPDL3A-202ENST00000487215 TNFSF11O14788 317 aa17.35■□□□□ 0.37
SMPDL3A-202ENST00000487215 ADAMDEC1O15204 470 aa17.35■□□□□ 0.37
SMPDL3A-202ENST00000487215 CLOCKO15516 846 aa17.35■□□□□ 0.37
SMPDL3A-202ENST00000487215 TP53P04637 393 aaPredicted RBP17.35■□□□□ 0.37
SMPDL3A-202ENST00000487215 TUBBP07437 444 aa17.35■□□□□ 0.37
SMPDL3A-202ENST00000487215 DANCRP0C864 163 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms