RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 EMBQ6PCB8 327 aa4□□□□□ -1.77
PRPF38A-203ENST00000487160 MISPQ8IVT2 679 aa4□□□□□ -1.77
PRPF38A-203ENST00000487160 PHC2Q8IXK0 858 aa4□□□□□ -1.77
PRPF38A-203ENST00000487160 CENPSQ8N2Z9 138 aa4□□□□□ -1.77
PRPF38A-203ENST00000487160 Q8N377 158 aa4□□□□□ -1.77
PRPF38A-203ENST00000487160 C4orf32Q8N8J7 132 aa4□□□□□ -1.77
PRPF38A-203ENST00000487160 ZNF491Q8N8L2 437 aa4□□□□□ -1.77
PRPF38A-203ENST00000487160 OR4F17Q8NGA8 305 aa4□□□□□ -1.77
PRPF38A-203ENST00000487160 NTNG2Q96CW9 530 aa4□□□□□ -1.77
PRPF38A-203ENST00000487160 OR4F4Q96R69 305 aa4□□□□□ -1.77
PRPF38A-203ENST00000487160 WRAP53Q9BUR4 548 aaKnown RBP4□□□□□ -1.77
PRPF38A-203ENST00000487160 ERVK-6Q9BXR3 956 aa4□□□□□ -1.77
PRPF38A-203ENST00000487160 RNF41Q9H4P4 317 aaPredicted RBP4□□□□□ -1.77
PRPF38A-203ENST00000487160 HEXA-AS1Q9H8Q6 139 aa4□□□□□ -1.77
PRPF38A-203ENST00000487160 GDAP2Q9NXN4 497 aa4□□□□□ -1.77
PRPF38A-203ENST00000487160 GPR83Q9NYM4 423 aa4□□□□□ -1.77
PRPF38A-203ENST00000487160 ATP6V0A2Q9Y487 856 aa4□□□□□ -1.77
PRPF38A-203ENST00000487160 DYNC1LI1Q9Y6G9 523 aaKnown RBP4□□□□□ -1.77
PRPF38A-203ENST00000487160 PRSS21Q9Y6M0 314 aa4□□□□□ -1.77
PRPF38A-203ENST00000487160 TRIOBPQ9H2D6 2365 aa4□□□□□ -1.77
PRPF38A-203ENST00000487160 OTOFQ9HC10 1997 aa4□□□□□ -1.77
PRPF38A-203ENST00000487160 RANBP2P49792 3224 aaKnown RBP3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 CEP290O15078 2479 aa3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 IGKV3D-15A0A087WSY6 115 aa3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 IGHV3-16A0A0C4DH30 117 aa3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 A0A0U1RQV5 110 aa3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 PDXKO00764 312 aa3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 LANCL1O43813 399 aa3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 VPS26AO75436 327 aa3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 GUCA1CO95843 209 aa3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 AK1P00568 194 aa3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 IGHG3P01860 377 aa3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 CA3P07451 260 aa3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 HEXBP07686 556 aa3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 TSPAN8P19075 237 aa3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 PAICSP22234 425 aaKnown RBP3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 CYP2F1P24903 491 aa3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 RFC2P35250 354 aa3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 VCPP55072 806 aaKnown RBP3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 HSD17B7P56937 341 aa3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 HAND2P61296 217 aa3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 MS4A2Q01362 244 aa3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 HSF2Q03933 536 aa3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 FCHO2Q0JRZ9 810 aa3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 SCGB2A2Q13296 93 aa3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 FCN2Q15485 313 aa3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 CD226Q15762 336 aa3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 PCK2Q16822 640 aa3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 TMEM44Q2T9K0 475 aa3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 GLIPR1L2Q4G1C9 344 aa3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 HSP90AA5PQ58FG0 334 aa3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 TAF3Q5VWG9 929 aa3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 RFWD3Q6PCD5 774 aa3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 PAQR6Q6TCH4 344 aa3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 REG3GQ6UW15 175 aa3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 ATRAIDQ6UW56 229 aa3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 METTL7BQ6UX53 244 aa3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 GPRIN3Q6ZVF9 776 aa3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 PAQR9Q6ZVX9 377 aa3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 ERASQ7Z444 233 aa3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 P4HA3Q7Z4N8 544 aa3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 DLX4Q92988 240 aaPredicted RBP3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 LHX4Q969G2 390 aa3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 TSPAN18Q96SJ8 248 aa3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 C19orf43Q9BQ61 176 aa3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 COQ10BQ9H8M1 238 aa3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 PANK3Q9H999 370 aa3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 KIAA0100Q14667 2235 aaKnown RBP3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 ALPK3Q96L96 1907 aa3.99□□□□□ -1.77
PRPF38A-203ENST00000487160 COL4A1P02462 1669 aa3.98□□□□□ -1.77
PRPF38A-203ENST00000487160 NPIPA5A0A0B4J1W7 369 aa3.98□□□□□ -1.77
PRPF38A-203ENST00000487160 NPIPA5E9PKD4 350 aa3.98□□□□□ -1.77
PRPF38A-203ENST00000487160 IMPA2O14732 288 aa3.98□□□□□ -1.77
PRPF38A-203ENST00000487160 CHADO15335 359 aa3.98□□□□□ -1.77
PRPF38A-203ENST00000487160 PDE5AO76074 875 aa3.98□□□□□ -1.77
PRPF38A-203ENST00000487160 NDUFA7O95182 113 aa3.98□□□□□ -1.77
PRPF38A-203ENST00000487160 IGSF6O95976 241 aa3.98□□□□□ -1.77
PRPF38A-203ENST00000487160 GOT2P00505 430 aaKnown RBP3.98□□□□□ -1.77
PRPF38A-203ENST00000487160 HSD17B1P14061 328 aa3.98□□□□□ -1.77
PRPF38A-203ENST00000487160 PPP2R1BP30154 601 aa3.98□□□□□ -1.77
PRPF38A-203ENST00000487160 PGFP49763 221 aa3.98□□□□□ -1.77
PRPF38A-203ENST00000487160 RAPSNQ13702 412 aa3.98□□□□□ -1.77
PRPF38A-203ENST00000487160 SNAI3Q3KNW1 292 aa3.98□□□□□ -1.77
PRPF38A-203ENST00000487160 FAM182AQ5T1J6 154 aa3.98□□□□□ -1.77
PRPF38A-203ENST00000487160 FAM219BQ5XKK7 198 aa3.98□□□□□ -1.77
PRPF38A-203ENST00000487160 ARSKQ6UWY0 536 aa3.98□□□□□ -1.77
PRPF38A-203ENST00000487160 APOOLQ6UXV4 268 aa3.98□□□□□ -1.77
PRPF38A-203ENST00000487160 ADAMTSL5Q6ZMM2 481 aa3.98□□□□□ -1.77
PRPF38A-203ENST00000487160 TIPARPQ7Z3E1 657 aaKnown RBP3.98□□□□□ -1.77
PRPF38A-203ENST00000487160 SUMF1Q8NBK3 374 aa3.98□□□□□ -1.77
PRPF38A-203ENST00000487160 OR4Q3Q8NH05 313 aa3.98□□□□□ -1.77
PRPF38A-203ENST00000487160 OR52J3Q8NH60 311 aa3.98□□□□□ -1.77
PRPF38A-203ENST00000487160 GIPC3Q8TF64 312 aa3.98□□□□□ -1.77
PRPF38A-203ENST00000487160 SLC25A36Q96CQ1 311 aa3.98□□□□□ -1.77
PRPF38A-203ENST00000487160 RBM4BQ9BQ04 359 aaKnown RBP3.98□□□□□ -1.77
PRPF38A-203ENST00000487160 ADNPQ9H2P0 1102 aa3.98□□□□□ -1.77
PRPF38A-203ENST00000487160 FAM114A2Q9NRY5 505 aa3.98□□□□□ -1.77
PRPF38A-203ENST00000487160 MBD2Q9UBB5 411 aa3.98□□□□□ -1.77
PRPF38A-203ENST00000487160 SH3BGRL2Q9UJC5 107 aa3.98□□□□□ -1.77
PRPF38A-203ENST00000487160 PURGQ9UJV8 347 aaKnown RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms