RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 ZNF845Q96IR2 970 aaPredicted RBP22.13■■□□□ 1.13
LIME1-206ENST00000487026 GIMAP2Q9UG22 337 aa22.13■■□□□ 1.13
LIME1-206ENST00000487026 MID2Q9UJV3 735 aa22.13■■□□□ 1.13
LIME1-206ENST00000487026 ACANP16112 2415 aa22.13■■□□□ 1.13
LIME1-206ENST00000487026 GIMAP1-GIMAP5A0A087WTJ2 511 aa22.12■■□□□ 1.13
LIME1-206ENST00000487026 A0A1W2PPR1 153 aa22.12■■□□□ 1.13
LIME1-206ENST00000487026 LSM1O15116 133 aaKnown RBP22.12■■□□□ 1.13
LIME1-206ENST00000487026 NKX2-2O95096 273 aa22.12■■□□□ 1.13
LIME1-206ENST00000487026 ATE1O95260 518 aa22.12■■□□□ 1.13
LIME1-206ENST00000487026 CHEK2O96017 543 aa22.12■■□□□ 1.13
LIME1-206ENST00000487026 RAF1P04049 648 aa22.12■■□□□ 1.13
LIME1-206ENST00000487026 IFI6P09912 130 aa22.12■■□□□ 1.13
LIME1-206ENST00000487026 ALDH3A1P30838 453 aa22.12■■□□□ 1.13
LIME1-206ENST00000487026 MAP3K8P41279 467 aa22.12■■□□□ 1.13
LIME1-206ENST00000487026 KIR2DL2P43627 348 aaPredicted RBP22.12■■□□□ 1.13
LIME1-206ENST00000487026 EEFSECP57772 596 aaKnown RBP22.12■■□□□ 1.13
LIME1-206ENST00000487026 PRR5P85299 388 aa22.12■■□□□ 1.13
LIME1-206ENST00000487026 C17orf67Q0P5P2 114 aa22.12■■□□□ 1.13
LIME1-206ENST00000487026 KEAP1Q14145 624 aa22.12■■□□□ 1.13
LIME1-206ENST00000487026 OR2A2Q6IF42 318 aa22.12■■□□□ 1.13
LIME1-206ENST00000487026 FNDC9Q8TBE3 224 aa22.12■■□□□ 1.13
LIME1-206ENST00000487026 GIMAP5Q96F15 307 aa22.12■■□□□ 1.13
LIME1-206ENST00000487026 OTUB1Q96FW1 271 aaPredicted RBP22.12■■□□□ 1.13
LIME1-206ENST00000487026 PGM2Q96G03 612 aa22.12■■□□□ 1.13
LIME1-206ENST00000487026 C16orf58Q96GQ5 468 aa22.12■■□□□ 1.13
LIME1-206ENST00000487026 ALPK1Q96QP1 1244 aa22.12■■□□□ 1.13
LIME1-206ENST00000487026 PIGQQ9BRB3 760 aa22.12■■□□□ 1.13
LIME1-206ENST00000487026 TRMOQ9BU70 441 aa22.12■■□□□ 1.13
LIME1-206ENST00000487026 MECRQ9BV79 373 aa22.12■■□□□ 1.13
LIME1-206ENST00000487026 IQCGQ9H095 443 aaKnown RBP22.12■■□□□ 1.13
LIME1-206ENST00000487026 OPN3Q9H1Y3 402 aaPredicted RBP22.12■■□□□ 1.13
LIME1-206ENST00000487026 TTC36A6NLP5 189 aa22.11■■□□□ 1.13
LIME1-206ENST00000487026 MSTNO14793 375 aa22.11■■□□□ 1.13
LIME1-206ENST00000487026 CASKO14936 926 aa22.11■■□□□ 1.13
LIME1-206ENST00000487026 TBX19O60806 448 aa22.11■■□□□ 1.13
LIME1-206ENST00000487026 TNFRSF21O75509 655 aa22.11■■□□□ 1.13
LIME1-206ENST00000487026 CRHP06850 196 aa22.11■■□□□ 1.13
LIME1-206ENST00000487026 ACP2P11117 423 aa22.11■■□□□ 1.13
LIME1-206ENST00000487026 NEFHP12036 1026 aa22.11■■□□□ 1.13
LIME1-206ENST00000487026 PPP2R2AP63151 447 aa22.11■■□□□ 1.13
LIME1-206ENST00000487026 PDE7AQ13946 482 aa22.11■■□□□ 1.13
LIME1-206ENST00000487026 ARL13AQ5H913 290 aaPredicted RBP22.11■■□□□ 1.13
LIME1-206ENST00000487026 FIGNL1Q6PIW4 674 aa22.11■■□□□ 1.13
LIME1-206ENST00000487026 ZNF474Q6S9Z5 364 aaPredicted RBP22.11■■□□□ 1.13
LIME1-206ENST00000487026 BANPQ8N9N5 519 aa22.11■■□□□ 1.13
LIME1-206ENST00000487026 SLC16A11Q8NCK7 471 aa22.11■■□□□ 1.13
LIME1-206ENST00000487026 OR4C3Q8NH37 302 aa22.11■■□□□ 1.13
LIME1-206ENST00000487026 CEP70Q8NHQ1 597 aa22.11■■□□□ 1.13
LIME1-206ENST00000487026 ZFP28Q8NHY6 868 aa22.11■■□□□ 1.13
LIME1-206ENST00000487026 HOXB13Q92826 284 aaPredicted RBP22.11■■□□□ 1.13
LIME1-206ENST00000487026 ZBED6CLQ96FA7 236 aaPredicted RBP22.11■■□□□ 1.13
LIME1-206ENST00000487026 ZNF764Q96H86 408 aaPredicted RBP22.11■■□□□ 1.13
LIME1-206ENST00000487026 APOPT1Q96IL0 206 aa22.11■■□□□ 1.13
LIME1-206ENST00000487026 FAM111AQ96PZ2 611 aa22.11■■□□□ 1.13
LIME1-206ENST00000487026 FBXO34Q9NWN3 711 aa22.11■■□□□ 1.13
LIME1-206ENST00000487026 SLC17A7Q9P2U7 560 aa22.11■■□□□ 1.13
LIME1-206ENST00000487026 NDRG3Q9UGV2 375 aa22.11■■□□□ 1.13
LIME1-206ENST00000487026 VDAC3Q9Y277 283 aa22.11■■□□□ 1.13
LIME1-206ENST00000487026 TRAF6Q9Y4K3 522 aa22.11■■□□□ 1.13
LIME1-206ENST00000487026 LINC01387J3KSC0 135 aa22.1■■□□□ 1.13
LIME1-206ENST00000487026 PIP5K1BO14986 540 aa22.1■■□□□ 1.13
LIME1-206ENST00000487026 SPAG7O75391 227 aa22.1■■□□□ 1.13
LIME1-206ENST00000487026 BCKDHAP12694 445 aa22.1■■□□□ 1.13
LIME1-206ENST00000487026 FRKP42685 505 aaPredicted RBP22.1■■□□□ 1.13
LIME1-206ENST00000487026 FOXD4Q12950 439 aaPredicted RBP22.1■■□□□ 1.13
LIME1-206ENST00000487026 PON3Q15166 354 aa22.1■■□□□ 1.13
LIME1-206ENST00000487026 UGT3A2Q3SY77 523 aa22.1■■□□□ 1.13
LIME1-206ENST00000487026 GLYR1Q49A26 553 aaPredicted RBP22.1■■□□□ 1.13
LIME1-206ENST00000487026 VPS26BQ4G0F5 336 aa22.1■■□□□ 1.13
LIME1-206ENST00000487026 RNF165Q6ZSG1 346 aa22.1■■□□□ 1.13
LIME1-206ENST00000487026 CAMKMTQ7Z624 323 aa22.1■■□□□ 1.13
LIME1-206ENST00000487026 ZAR1Q86SH2 424 aa22.1■■□□□ 1.13
LIME1-206ENST00000487026 CDRT4Q8N9R6 151 aa22.1■■□□□ 1.13
LIME1-206ENST00000487026 GATSQ8NAP1 163 aa22.1■■□□□ 1.13
LIME1-206ENST00000487026 AGR3Q8TD06 166 aa22.1■■□□□ 1.13
LIME1-206ENST00000487026 TWIST2Q8WVJ9 160 aa22.1■■□□□ 1.13
LIME1-206ENST00000487026 MBD6Q96DN6 1003 aa22.1■■□□□ 1.13
LIME1-206ENST00000487026 WFIKKN1Q96NZ8 548 aa22.1■■□□□ 1.13
LIME1-206ENST00000487026 NTMQ9P121 344 aa22.1■■□□□ 1.13
LIME1-206ENST00000487026 IGLV3-32A0A0A0MS00 114 aa22.09■■□□□ 1.13
LIME1-206ENST00000487026 OXSR1O95747 527 aaPredicted RBP22.09■■□□□ 1.13
LIME1-206ENST00000487026 FGF4P08620 206 aa22.09■■□□□ 1.13
LIME1-206ENST00000487026 ADAM8P78325 824 aa22.09■■□□□ 1.13
LIME1-206ENST00000487026 DUSP5Q16690 384 aa22.09■■□□□ 1.13
LIME1-206ENST00000487026 DEFB113Q30KQ7 82 aa22.09■■□□□ 1.13
LIME1-206ENST00000487026 ZCCHC23Q6ZST2 131 aa22.09■■□□□ 1.13
LIME1-206ENST00000487026 TRABD2AQ86V40 505 aa22.09■■□□□ 1.13
LIME1-206ENST00000487026 NPAS1Q99742 590 aa22.09■■□□□ 1.13
LIME1-206ENST00000487026 ANKZF1Q9H8Y5 726 aa22.09■■□□□ 1.13
LIME1-206ENST00000487026 L2HGDHQ9H9P8 463 aa22.09■■□□□ 1.13
LIME1-206ENST00000487026 ACSS1Q9NUB1 689 aaPredicted RBP22.09■■□□□ 1.13
LIME1-206ENST00000487026 KLHL28Q9NXS3 571 aa22.09■■□□□ 1.13
LIME1-206ENST00000487026 TMED5Q9Y3A6 229 aa22.09■■□□□ 1.13
LIME1-206ENST00000487026 AP4B1Q9Y6B7 739 aa22.09■■□□□ 1.13
LIME1-206ENST00000487026 EMC8O43402 210 aa22.08■■□□□ 1.13
LIME1-206ENST00000487026 NDUFB5O43674 189 aa22.08■■□□□ 1.13
LIME1-206ENST00000487026 NPHS1O60500 1241 aa22.08■■□□□ 1.13
LIME1-206ENST00000487026 KCNK2O95069 426 aa22.08■■□□□ 1.13
LIME1-206ENST00000487026 OPN1LWP04000 364 aa22.08■■□□□ 1.13
LIME1-206ENST00000487026 CD79BP40259 229 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms