RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 FIG4Q92562 907 aa8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 NCLNQ969V3 563 aa8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 TM4SF18Q96CE8 201 aa8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 MS4A6EQ96DS6 147 aa8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 ZNF597Q96LX8 424 aa8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 F2RL3Q96RI0 385 aa8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 DMRTA2Q96SC8 542 aa8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 CHID1Q9BWS9 393 aa8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 ZNF717Q9BY31 904 aaPredicted RBP8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 DEFB126Q9BYW3 111 aa8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 UCK2Q9BZX2 261 aa8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 DEFB127Q9H1M4 99 aa8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 IKZF5Q9H5V7 419 aa8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 TRIM45Q9H8W5 580 aaPredicted RBP8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 LYARQ9NX58 379 aaKnown RBP8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 THUMPD1Q9NXG2 353 aaKnown RBP8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 TAS2R9Q9NYW1 312 aa8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 KCMF1Q9P0J7 381 aa8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 GMPR2Q9P2T1 348 aaKnown RBP8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 TNFRSF10DQ9UBN6 386 aa8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 EXO1Q9UQ84 846 aaKnown RBP8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 ABCA2Q9BZC7 2435 aa8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 WWP2O00308 870 aa8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 RTCAO00442 366 aaKnown RBP8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 CLOCKO15516 846 aa8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 ERI3O43414 337 aaKnown RBP8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 ITGA10O75578 1167 aa8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 CLDN14O95500 239 aa8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 IFNA14P01570 189 aa8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 GSNP06396 782 aa8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 IL3P08700 152 aa8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 RNH1P13489 461 aaKnown RBP8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 ZNF24P17028 368 aa8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 ZNF10P21506 573 aaPredicted RBP8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 UQCRC2P22695 453 aa8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 CERS1P27544 350 aa8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 TRHRP34981 398 aaPredicted RBP8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 PCGF2P35227 344 aa8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 SSR2P43308 183 aa8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 GTF2A1P52655 376 aaPredicted RBP8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 CASP6P55212 293 aa8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 FOLH1Q04609 750 aa8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 BLMHQ13867 455 aa8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 RGNQ15493 299 aa8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 LRRC36Q1X8D7 754 aa8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 ZNF750Q32MQ0 723 aa8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 GTDC1Q4AE62 458 aa8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 EMC4Q5J8M3 183 aa8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 HMBOX1Q6NT76 420 aa8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 RPTNQ6XPR3 784 aa8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 ZNF793Q6ZN11 406 aa8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 UBE3DQ7Z6J8 389 aa8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 CD163Q86VB7 1156 aa8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 SAMD14Q8IZD0 417 aaPredicted RBP8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 CLECL1Q8IZS7 167 aa8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 GHDCQ8N2G8 530 aa8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 SVOPLQ8N434 492 aa8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 METTL25Q8N6Q8 603 aa8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 C11orf65Q8NCR3 313 aa8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 B3GNT7Q8NFL0 401 aa8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 ZFP28Q8NHY6 868 aa8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 PSMA8Q8TAA3 256 aa8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 NUDT8Q8WV74 236 aa8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 GAL3ST3Q96A11 431 aa8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 SDCCAG3Q96C92 435 aa8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 ZBED6CLQ96FA7 236 aaPredicted RBP8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 RDH12Q96NR8 316 aa8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 SORBS1Q9BX66 1292 aaKnown RBP8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 TMEM38AQ9H6F2 299 aa8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 PRTFDC1Q9NRG1 225 aa8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 SLC6A13Q9NSD5 602 aa8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 DNAJB9Q9UBS3 223 aa8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 ZNF639Q9UID6 485 aa8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 LIPGQ9Y5X9 500 aa8.65□□□□□ -1.02
TMEM39A-208ENST00000486159 NKX2-6A6NCS4 301 aa8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 WASHC1A8K0Z3 465 aa8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 FAM166BA8MTA8 275 aa8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 SAP18O00422 153 aaKnown RBP8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 CYR61O00622 381 aa8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 PDPK1O15530 556 aa8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 LDB3O75112 727 aa8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 OR2J2O76002 312 aa8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 OR6B1O95007 311 aa8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 HPRP00739 348 aa8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 TPOP07202 933 aa8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 FAM58BPP0C7Q3 252 aa8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 HIST1H1TP22492 207 aaPredicted RBP8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 KDELR2P33947 212 aa8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 ANXA11P50995 505 aaKnown RBP8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 SMSP52788 366 aa8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 LIM2P55344 173 aa8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 RAB38P57729 211 aa8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 HBA1P69905 142 aa8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 EPS8Q12929 822 aa8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 GCNT6Q5T4J0 391 aa8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 MRM1Q6IN84 353 aaKnown RBP8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 ABHD17CQ6PCB6 329 aa8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 BHLHB9Q6PI77 547 aa8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 IL20RBQ6UXL0 311 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms