RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 RAB3IL1Q8TBN0 382 aa6.36□□□□□ -1.39
VPS50-218ENST00000485994 OR5P2Q8WZ92 322 aa6.36□□□□□ -1.39
VPS50-218ENST00000485994 MOAP1Q96BY2 351 aa6.36□□□□□ -1.39
VPS50-218ENST00000485994 TSSK3Q96PN8 268 aa6.36□□□□□ -1.39
VPS50-218ENST00000485994 STACQ99469 402 aa6.36□□□□□ -1.39
VPS50-218ENST00000485994 SORT1Q99523 831 aa6.36□□□□□ -1.39
VPS50-218ENST00000485994 BHLHE41Q9C0J9 482 aaPredicted RBP6.36□□□□□ -1.39
VPS50-218ENST00000485994 GALNT9Q9HCQ5 603 aa6.36□□□□□ -1.39
VPS50-218ENST00000485994 DUSP22Q9NRW4 184 aa6.36□□□□□ -1.39
VPS50-218ENST00000485994 SIRT3Q9NTG7 399 aaPredicted RBP6.36□□□□□ -1.39
VPS50-218ENST00000485994 KLRF1Q9NZS2 232 aa6.36□□□□□ -1.39
VPS50-218ENST00000485994 JKAMPQ9P055 326 aa6.36□□□□□ -1.39
VPS50-218ENST00000485994 KCNN3Q9UGI6 736 aa6.36□□□□□ -1.39
VPS50-218ENST00000485994 EIF3LQ9Y262 564 aaKnown RBP6.36□□□□□ -1.39
VPS50-218ENST00000485994 POLQO75417 2590 aa6.36□□□□□ -1.39
VPS50-218ENST00000485994 CSMD1Q96PZ7 3565 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 FBN2P35556 2912 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 C15orf38-AP3S2A0A0A6YYH1 394 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 FAM221AA4D161 298 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 B4DXG7 233 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 DVL2O14641 736 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 AKAP10O43572 662 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 HCRTR2O43614 444 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 ITM2AO43736 263 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 SCN2BO60939 215 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 ERLIN1O75477 346 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 TNFRSF21O75509 655 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 KCNK2O95069 426 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 LRATO95237 230 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 UTS2O95399 124 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 CRHP06850 196 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 LAMP1P11279 417 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 PEPDP12955 493 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 ZNF708P17019 499 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 CTSSP25774 331 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 DPP4P27487 766 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 EVI2BP34910 448 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 GPC1P35052 558 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 HPCAL1P37235 193 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 ADH7P40394 386 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 SLC1A6P48664 564 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 CCT3P49368 545 aaKnown RBP6.35□□□□□ -1.39
VPS50-218ENST00000485994 PRIM2P49643 509 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 LHX2P50458 406 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 EEFSECP57772 596 aaKnown RBP6.35□□□□□ -1.39
VPS50-218ENST00000485994 B3GALT5-AS1P59052 145 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 HSPB3Q12988 150 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 STX3Q13277 289 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 RCAN2Q14206 197 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 CHI3L2Q15782 390 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 BEND6Q5SZJ8 279 aaPredicted RBP6.35□□□□□ -1.39
VPS50-218ENST00000485994 CEP85LQ5SZL2 805 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 OGFOD2Q6N063 350 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 MFSD12Q6NUT3 480 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 BHLHB9Q6PI77 547 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 VASH1Q7L8A9 365 aaPredicted RBP6.35□□□□□ -1.39
VPS50-218ENST00000485994 MTERF4Q7Z6M4 381 aaKnown RBP6.35□□□□□ -1.39
VPS50-218ENST00000485994 YRDCQ86U90 279 aaKnown RBP6.35□□□□□ -1.39
VPS50-218ENST00000485994 MISPQ8IVT2 679 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 FNDC5Q8NAU1 212 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 SLC16A11Q8NCK7 471 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 OR2M3Q8NG83 312 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 OR7A2PQ8NGA2 310 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 OR8J2Q8NGG1 315 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 OR14L1PQ8NHC6 308 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 CDC26Q8NHZ8 85 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 PPP1R14CQ8TAE6 165 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 SFXN5Q8TD22 340 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 ACTRT2Q8TDY3 377 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 GFM2Q969S9 779 aaKnown RBP6.35□□□□□ -1.39
VPS50-218ENST00000485994 CIDECQ96AQ7 238 aaPredicted RBP6.35□□□□□ -1.39
VPS50-218ENST00000485994 TESCQ96BS2 214 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 EFHD2Q96C19 240 aaPredicted RBP6.35□□□□□ -1.39
VPS50-218ENST00000485994 TUBGCP3Q96CW5 907 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 FAM120BQ96EK7 910 aaKnown RBP6.35□□□□□ -1.39
VPS50-218ENST00000485994 LRRC46Q96FV0 321 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 G6PC3Q9BUM1 346 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 UCK2Q9BZX2 261 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 C20orf27Q9GZN8 174 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 HOXD1Q9GZZ0 328 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 ACBD3Q9H3P7 528 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 PIGUQ9H490 435 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 PTGES2Q9H7Z7 377 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 AKTIPQ9H8T0 292 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 MEAF6Q9HAF1 191 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 MCCC2Q9HCC0 563 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 SERHLQ9NQF3 203 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 THAP1Q9NVV9 213 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 ALKBH4Q9NXW9 302 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 TAS2R10Q9NYW0 307 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 NOP53Q9NZM5 478 aaKnown RBP6.35□□□□□ -1.39
VPS50-218ENST00000485994 STOML1Q9UBI4 398 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 TNFRSF10DQ9UBN6 386 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 FBXL2Q9UKC9 423 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 PRDM4Q9UKN5 801 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 SLC6A5Q9Y345 797 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 FIS1Q9Y3D6 152 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 KIAA1549Q9HCM3 1950 aa6.35□□□□□ -1.39
VPS50-218ENST00000485994 ANKRD17O75179 2603 aaKnown RBP6.34□□□□□ -1.39
VPS50-218ENST00000485994 A0A087WZY1 265 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms