RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 APOOLQ6UXV4 268 aa10.81□□□□□ -0.68
HPS4-214ENST00000485842 BNC2Q6ZN30 1099 aaPredicted RBP10.81□□□□□ -0.68
HPS4-214ENST00000485842 DHDDSQ86SQ9 333 aa10.81□□□□□ -0.68
HPS4-214ENST00000485842 SPPL2CQ8IUH8 684 aa10.81□□□□□ -0.68
HPS4-214ENST00000485842 WDSUB1Q8N9V3 476 aa10.81□□□□□ -0.68
HPS4-214ENST00000485842 CHDHQ8NE62 594 aaPredicted RBP10.81□□□□□ -0.68
HPS4-214ENST00000485842 OR4K17Q8NGC6 315 aa10.81□□□□□ -0.68
HPS4-214ENST00000485842 OR4C3Q8NH37 302 aa10.81□□□□□ -0.68
HPS4-214ENST00000485842 RNF138Q8WVD3 245 aa10.81□□□□□ -0.68
HPS4-214ENST00000485842 PHF12Q96QT6 1004 aa10.81□□□□□ -0.68
HPS4-214ENST00000485842 SDF2Q99470 211 aa10.81□□□□□ -0.68
HPS4-214ENST00000485842 RTN4RQ9BZR6 473 aa10.81□□□□□ -0.68
HPS4-214ENST00000485842 NMUR2Q9GZQ4 415 aa10.81□□□□□ -0.68
HPS4-214ENST00000485842 SLC6A15Q9H2J7 730 aa10.81□□□□□ -0.68
HPS4-214ENST00000485842 MRGBPQ9NV56 204 aa10.81□□□□□ -0.68
HPS4-214ENST00000485842 SLC25A37Q9NYZ2 338 aa10.81□□□□□ -0.68
HPS4-214ENST00000485842 SLAMF8Q9P0V8 285 aa10.81□□□□□ -0.68
HPS4-214ENST00000485842 ARMCX1Q9P291 453 aa10.81□□□□□ -0.68
HPS4-214ENST00000485842 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.81□□□□□ -0.68
HPS4-214ENST00000485842 SH3BGRL2Q9UJC5 107 aa10.81□□□□□ -0.68
HPS4-214ENST00000485842 DKKL1Q9UK85 242 aa10.81□□□□□ -0.68
HPS4-214ENST00000485842 NDUFAF1Q9Y375 327 aa10.81□□□□□ -0.68
HPS4-214ENST00000485842 ZNF407Q9C0G0 2248 aa10.8□□□□□ -0.68
HPS4-214ENST00000485842 CLIC1O00299 241 aa10.8□□□□□ -0.68
HPS4-214ENST00000485842 NDUFB5O43674 189 aa10.8□□□□□ -0.68
HPS4-214ENST00000485842 GMFGO60234 142 aa10.8□□□□□ -0.68
HPS4-214ENST00000485842 STX11O75558 287 aa10.8□□□□□ -0.68
HPS4-214ENST00000485842 FREM3P0C091 2139 aa10.8□□□□□ -0.68
HPS4-214ENST00000485842 ETFAP13804 333 aa10.8□□□□□ -0.68
HPS4-214ENST00000485842 HOXB9P17482 250 aaPredicted RBP10.8□□□□□ -0.68
HPS4-214ENST00000485842 TBXA2RP21731 343 aa10.8□□□□□ -0.68
HPS4-214ENST00000485842 TCEA1P23193 301 aaKnown RBP10.8□□□□□ -0.68
HPS4-214ENST00000485842 DCTP40126 519 aa10.8□□□□□ -0.68
HPS4-214ENST00000485842 NFYCQ13952 458 aa10.8□□□□□ -0.68
HPS4-214ENST00000485842 MAPRE2Q15555 327 aa10.8□□□□□ -0.68
HPS4-214ENST00000485842 ARHGAP11BQ3KRB8 267 aa10.8□□□□□ -0.68
HPS4-214ENST00000485842 LRIF1Q5T3J3 769 aa10.8□□□□□ -0.68
HPS4-214ENST00000485842 HEPHL1Q6MZM0 1159 aa10.8□□□□□ -0.68
HPS4-214ENST00000485842 TRILQ7L0X0 811 aa10.8□□□□□ -0.68
HPS4-214ENST00000485842 RETREG3Q86VR2 466 aa10.8□□□□□ -0.68
HPS4-214ENST00000485842 SNX32Q86XE0 403 aa10.8□□□□□ -0.68
HPS4-214ENST00000485842 PLCZ1Q86YW0 608 aa10.8□□□□□ -0.68
HPS4-214ENST00000485842 MSRB3Q8IXL7 192 aa10.8□□□□□ -0.68
HPS4-214ENST00000485842 ROPN1LQ96C74 230 aa10.8□□□□□ -0.68
HPS4-214ENST00000485842 NTNG2Q96CW9 530 aa10.8□□□□□ -0.68
HPS4-214ENST00000485842 UBQLN3Q9H347 655 aa10.8□□□□□ -0.68
HPS4-214ENST00000485842 DSN1Q9H410 356 aa10.8□□□□□ -0.68
HPS4-214ENST00000485842 RAD21L1Q9H4I0 556 aa10.8□□□□□ -0.68
HPS4-214ENST00000485842 SDHAF3Q9NRP4 125 aa10.8□□□□□ -0.68
HPS4-214ENST00000485842 UBQLN4Q9NRR5 601 aa10.8□□□□□ -0.68
HPS4-214ENST00000485842 QPCTLQ9NXS2 382 aa10.8□□□□□ -0.68
HPS4-214ENST00000485842 VAPAQ9P0L0 249 aa10.8□□□□□ -0.68
HPS4-214ENST00000485842 FBXL2Q9UKC9 423 aa10.8□□□□□ -0.68
HPS4-214ENST00000485842 MKLN1Q9UL63 735 aa10.8□□□□□ -0.68
HPS4-214ENST00000485842 WDR45Q9Y484 360 aa10.8□□□□□ -0.68
HPS4-214ENST00000485842 TRGV5A0A0B4J1U4 118 aa10.79□□□□□ -0.68
HPS4-214ENST00000485842 TRGV8A0A0C4DH27 118 aa10.79□□□□□ -0.68
HPS4-214ENST00000485842 ALG1L2C9J202 215 aa10.79□□□□□ -0.68
HPS4-214ENST00000485842 ADAM10O14672 748 aa10.79□□□□□ -0.68
HPS4-214ENST00000485842 SNX3O60493 162 aa10.79□□□□□ -0.68
HPS4-214ENST00000485842 FCMRO60667 390 aa10.79□□□□□ -0.68
HPS4-214ENST00000485842 SLC19A2O60779 497 aa10.79□□□□□ -0.68
HPS4-214ENST00000485842 CCDC22O60826 627 aa10.79□□□□□ -0.68
HPS4-214ENST00000485842 TNFRSF21O75509 655 aa10.79□□□□□ -0.68
HPS4-214ENST00000485842 CBR3O75828 277 aa10.79□□□□□ -0.68
HPS4-214ENST00000485842 ZIC2O95409 532 aaPredicted RBP10.79□□□□□ -0.68
HPS4-214ENST00000485842 H6PDO95479 791 aa10.79□□□□□ -0.68
HPS4-214ENST00000485842 IGHG3P01860 377 aa10.79□□□□□ -0.68
HPS4-214ENST00000485842 TPOP07202 933 aa10.79□□□□□ -0.68
HPS4-214ENST00000485842 NGFRP08138 427 aa10.79□□□□□ -0.68
HPS4-214ENST00000485842 NR2F1P10589 423 aa10.79□□□□□ -0.68
HPS4-214ENST00000485842 MVDP53602 400 aa10.79□□□□□ -0.68
HPS4-214ENST00000485842 ATP12AP54707 1039 aa10.79□□□□□ -0.68
HPS4-214ENST00000485842 DSTNP60981 165 aa10.79□□□□□ -0.68
HPS4-214ENST00000485842 TXNL4AP83876 142 aaKnown RBP10.79□□□□□ -0.68
HPS4-214ENST00000485842 CD226Q15762 336 aa10.79□□□□□ -0.68
HPS4-214ENST00000485842 SYPL1Q16563 259 aa10.79□□□□□ -0.68
HPS4-214ENST00000485842 MMEL1Q495T6 779 aa10.79□□□□□ -0.68
HPS4-214ENST00000485842 EIPR1Q53HC9 387 aa10.79□□□□□ -0.68
HPS4-214ENST00000485842 WIPI1Q5MNZ9 446 aaPredicted RBP10.79□□□□□ -0.68
HPS4-214ENST00000485842 PDZK1Q5T2W1 519 aa10.79□□□□□ -0.68
HPS4-214ENST00000485842 C1QL3Q5VWW1 255 aa10.79□□□□□ -0.68
HPS4-214ENST00000485842 ARHGAP11AQ6P4F7 1023 aa10.79□□□□□ -0.68
HPS4-214ENST00000485842 FRRS1Q6ZNA5 592 aa10.79□□□□□ -0.68
HPS4-214ENST00000485842 FGD2Q7Z6J4 655 aa10.79□□□□□ -0.68
HPS4-214ENST00000485842 HMGN2P46Q86SG4 172 aa10.79□□□□□ -0.68
HPS4-214ENST00000485842 YRDCQ86U90 279 aaKnown RBP10.79□□□□□ -0.68
HPS4-214ENST00000485842 ANKFN1Q8N957 763 aa10.79□□□□□ -0.68
HPS4-214ENST00000485842 ZNF527Q8NB42 609 aa10.79□□□□□ -0.68
HPS4-214ENST00000485842 FAM83FQ8NEG4 500 aaPredicted RBP10.79□□□□□ -0.68
HPS4-214ENST00000485842 DUSP19Q8WTR2 217 aa10.79□□□□□ -0.68
HPS4-214ENST00000485842 TSPEARQ8WU66 669 aa10.79□□□□□ -0.68
HPS4-214ENST00000485842 SH3YL1Q96HL8 342 aaPredicted RBP10.79□□□□□ -0.68
HPS4-214ENST00000485842 ZNF350Q9GZX5 532 aa10.79□□□□□ -0.68
HPS4-214ENST00000485842 HOXD1Q9GZZ0 328 aa10.79□□□□□ -0.68
HPS4-214ENST00000485842 FAM53CQ9NYF3 392 aa10.79□□□□□ -0.68
HPS4-214ENST00000485842 MED11Q9P086 117 aa10.79□□□□□ -0.68
HPS4-214ENST00000485842 TNFRSF10DQ9UBN6 386 aa10.79□□□□□ -0.68
HPS4-214ENST00000485842 DNAJC13O75165 2243 aa10.78□□□□□ -0.68
HPS4-214ENST00000485842 TRBV5-3A0A0A0MS03 114 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms