RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 ZNF432O94892 652 aa3.73□□□□□ -1.81
VPS13A-211ENST00000484581 NUDT14O95848 222 aa3.73□□□□□ -1.81
VPS13A-211ENST00000484581 JCHAINP01591 159 aa3.73□□□□□ -1.81
VPS13A-211ENST00000484581 SLC2A3P11169 496 aa3.73□□□□□ -1.81
VPS13A-211ENST00000484581 XRCC1P18887 633 aaPredicted RBP3.73□□□□□ -1.81
VPS13A-211ENST00000484581 PCMT1P22061 227 aa3.73□□□□□ -1.81
VPS13A-211ENST00000484581 HPCAL1P37235 193 aa3.73□□□□□ -1.81
VPS13A-211ENST00000484581 ATP5OP48047 213 aa3.73□□□□□ -1.81
VPS13A-211ENST00000484581 CCT3P49368 545 aaKnown RBP3.73□□□□□ -1.81
VPS13A-211ENST00000484581 RPS6P62753 249 aaKnown RBP3.73□□□□□ -1.81
VPS13A-211ENST00000484581 FKBP3Q00688 224 aaKnown RBP3.73□□□□□ -1.81
VPS13A-211ENST00000484581 BDH1Q02338 343 aa3.73□□□□□ -1.81
VPS13A-211ENST00000484581 MXD4Q14582 209 aaPredicted RBP3.73□□□□□ -1.81
VPS13A-211ENST00000484581 SSX2Q16385 188 aa3.73□□□□□ -1.81
VPS13A-211ENST00000484581 SNAI3Q3KNW1 292 aa3.73□□□□□ -1.81
VPS13A-211ENST00000484581 GGTA1PQ4G0N0 100 aa3.73□□□□□ -1.81
VPS13A-211ENST00000484581 ACER2Q5QJU3 275 aa3.73□□□□□ -1.81
VPS13A-211ENST00000484581 ACSM5Q6NUN0 579 aa3.73□□□□□ -1.81
VPS13A-211ENST00000484581 APOOLQ6UXV4 268 aa3.73□□□□□ -1.81
VPS13A-211ENST00000484581 CCDC80Q76M96 950 aa3.73□□□□□ -1.81
VPS13A-211ENST00000484581 TRPM8Q7Z2W7 1104 aa3.73□□□□□ -1.81
VPS13A-211ENST00000484581 MOB3BQ86TA1 216 aa3.73□□□□□ -1.81
VPS13A-211ENST00000484581 ZNF329Q86UD4 541 aa3.73□□□□□ -1.81
VPS13A-211ENST00000484581 FAM228AQ86W67 206 aa3.73□□□□□ -1.81
VPS13A-211ENST00000484581 UBE2J2Q8N2K1 259 aa3.73□□□□□ -1.81
VPS13A-211ENST00000484581 METTL4Q8N3J2 472 aa3.73□□□□□ -1.81
VPS13A-211ENST00000484581 ZSCAN4Q8NAM6 433 aaPredicted RBP3.73□□□□□ -1.81
VPS13A-211ENST00000484581 OR1F12Q8NHA8 337 aa3.73□□□□□ -1.81
VPS13A-211ENST00000484581 OR2T6Q8NHC8 308 aa3.73□□□□□ -1.81
VPS13A-211ENST00000484581 PELI1Q96FA3 418 aa3.73□□□□□ -1.81
VPS13A-211ENST00000484581 WBP1Q96G27 269 aa3.73□□□□□ -1.81
VPS13A-211ENST00000484581 TCEANC2Q96MN5 208 aa3.73□□□□□ -1.81
VPS13A-211ENST00000484581 GPR61Q9BZJ8 451 aa3.73□□□□□ -1.81
VPS13A-211ENST00000484581 ELL3Q9HB65 397 aaPredicted RBP3.73□□□□□ -1.81
VPS13A-211ENST00000484581 FGF22Q9HCT0 170 aa3.73□□□□□ -1.81
VPS13A-211ENST00000484581 SEC14L3Q9UDX4 400 aa3.73□□□□□ -1.81
VPS13A-211ENST00000484581 RARRES3Q9UL19 164 aa3.73□□□□□ -1.81
VPS13A-211ENST00000484581 SYNRGQ9UMZ2 1314 aa3.72□□□□□ -1.81
VPS13A-211ENST00000484581 IGHV4-30-2A0A087WSY4 118 aa3.72□□□□□ -1.81
VPS13A-211ENST00000484581 A0A087X002 238 aa3.72□□□□□ -1.81
VPS13A-211ENST00000484581 ARHGEF35A5YM69 484 aa3.72□□□□□ -1.81
VPS13A-211ENST00000484581 SNTNA6NMZ2 147 aa3.72□□□□□ -1.81
VPS13A-211ENST00000484581 ARHGEF33A8MVX0 844 aa3.72□□□□□ -1.81
VPS13A-211ENST00000484581 C11orf98E9PRG8 122 aa3.72□□□□□ -1.81
VPS13A-211ENST00000484581 N4BP1O75113 896 aaKnown RBP3.72□□□□□ -1.81
VPS13A-211ENST00000484581 ZFAND5O76080 213 aa3.72□□□□□ -1.81
VPS13A-211ENST00000484581 SORBS2O94875 1100 aaKnown RBP3.72□□□□□ -1.81
VPS13A-211ENST00000484581 TSPAN12O95859 305 aa3.72□□□□□ -1.81
VPS13A-211ENST00000484581 HBQ1P09105 142 aa3.72□□□□□ -1.81
VPS13A-211ENST00000484581 H2BFMP0C1H6 154 aa3.72□□□□□ -1.81
VPS13A-211ENST00000484581 POU2F1P14859 743 aa3.72□□□□□ -1.81
VPS13A-211ENST00000484581 PPP2R1BP30154 601 aa3.72□□□□□ -1.81
VPS13A-211ENST00000484581 POU3F4P49335 361 aa3.72□□□□□ -1.81
VPS13A-211ENST00000484581 CASP4P49662 377 aa3.72□□□□□ -1.81
VPS13A-211ENST00000484581 CDH4P55283 916 aa3.72□□□□□ -1.81
VPS13A-211ENST00000484581 PRMT2P55345 433 aa3.72□□□□□ -1.81
VPS13A-211ENST00000484581 TMEM50BP56557 158 aa3.72□□□□□ -1.81
VPS13A-211ENST00000484581 SEC61GP60059 68 aa3.72□□□□□ -1.81
VPS13A-211ENST00000484581 GSTO1P78417 241 aa3.72□□□□□ -1.81
VPS13A-211ENST00000484581 ZNF33BQ06732 778 aa3.72□□□□□ -1.81
VPS13A-211ENST00000484581 RGS1Q08116 209 aa3.72□□□□□ -1.81
VPS13A-211ENST00000484581 DCST2Q5T1A1 773 aa3.72□□□□□ -1.81
VPS13A-211ENST00000484581 OTUD3Q5T2D3 398 aaPredicted RBP3.72□□□□□ -1.81
VPS13A-211ENST00000484581 SEL1L2Q5TEA6 688 aa3.72□□□□□ -1.81
VPS13A-211ENST00000484581 DOK6Q6PKX4 331 aa3.72□□□□□ -1.81
VPS13A-211ENST00000484581 GDPGP1Q6ZNW5 385 aa3.72□□□□□ -1.81
VPS13A-211ENST00000484581 NOTCH2NLQ7Z3S9 236 aa3.72□□□□□ -1.81
VPS13A-211ENST00000484581 SERINC5Q86VE9 423 aa3.72□□□□□ -1.81
VPS13A-211ENST00000484581 CDR2LQ86X02 465 aaPredicted RBP3.72□□□□□ -1.81
VPS13A-211ENST00000484581 CCDC71Q8IV32 467 aaPredicted RBP3.72□□□□□ -1.81
VPS13A-211ENST00000484581 SLC38A6Q8IZM9 456 aa3.72□□□□□ -1.81
VPS13A-211ENST00000484581 BEST4Q8NFU0 473 aa3.72□□□□□ -1.81
VPS13A-211ENST00000484581 M1APQ8TC57 530 aa3.72□□□□□ -1.81
VPS13A-211ENST00000484581 FNDC8Q8TC99 324 aa3.72□□□□□ -1.81
VPS13A-211ENST00000484581 SLC2A14Q8TDB8 520 aa3.72□□□□□ -1.81
VPS13A-211ENST00000484581 DNAJA3Q96EY1 480 aa3.72□□□□□ -1.81
VPS13A-211ENST00000484581 C12orf66Q96MD2 445 aa3.72□□□□□ -1.81
VPS13A-211ENST00000484581 RPRD1AQ96P16 312 aaPredicted RBP3.72□□□□□ -1.81
VPS13A-211ENST00000484581 SLC6A7Q99884 636 aa3.72□□□□□ -1.81
VPS13A-211ENST00000484581 SYT15Q9BQS2 421 aa3.72□□□□□ -1.81
VPS13A-211ENST00000484581 TUBGCP2Q9BSJ2 902 aa3.72□□□□□ -1.81
VPS13A-211ENST00000484581 ADGRL4Q9HBW9 690 aa3.72□□□□□ -1.81
VPS13A-211ENST00000484581 ONECUT1Q9UBC0 465 aa3.72□□□□□ -1.81
VPS13A-211ENST00000484581 SUN2Q9UH99 717 aa3.72□□□□□ -1.81
VPS13A-211ENST00000484581 ADAM28Q9UKQ2 775 aa3.72□□□□□ -1.81
VPS13A-211ENST00000484581 MGAT4AQ9UM21 535 aa3.72□□□□□ -1.81
VPS13A-211ENST00000484581 MRPS28Q9Y2Q9 187 aaKnown RBP3.72□□□□□ -1.81
VPS13A-211ENST00000484581 FBXO7Q9Y3I1 522 aa3.72□□□□□ -1.81
VPS13A-211ENST00000484581 GMPPBQ9Y5P6 360 aa3.72□□□□□ -1.81
VPS13A-211ENST00000484581 TRGV8A0A0C4DH27 118 aa3.71□□□□□ -1.82
VPS13A-211ENST00000484581 MSH4O15457 936 aa3.71□□□□□ -1.82
VPS13A-211ENST00000484581 TAPBPO15533 448 aa3.71□□□□□ -1.82
VPS13A-211ENST00000484581 TYROBPO43914 113 aa3.71□□□□□ -1.82
VPS13A-211ENST00000484581 NDUFB10O96000 172 aa3.71□□□□□ -1.82
VPS13A-211ENST00000484581 SP1P08047 785 aa3.71□□□□□ -1.82
VPS13A-211ENST00000484581 IGFBP1P08833 259 aaPredicted RBP3.71□□□□□ -1.82
VPS13A-211ENST00000484581 ZNF26P17031 533 aaPredicted RBP3.71□□□□□ -1.82
VPS13A-211ENST00000484581 MX1P20591 662 aa3.71□□□□□ -1.82
VPS13A-211ENST00000484581 GALP22466 123 aa3.71□□□□□ -1.82
VPS13A-211ENST00000484581 IGFBP5P24593 272 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms