RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 WASP42768 502 aa18.38■□□□□ 0.53
LIMS2-215ENST00000484252 SPRED2Q7Z698 418 aa18.38■□□□□ 0.53
LIMS2-215ENST00000484252 PAQR7Q86WK9 346 aa18.38■□□□□ 0.53
LIMS2-215ENST00000484252 NEIL3Q8TAT5 605 aa18.38■□□□□ 0.53
LIMS2-215ENST00000484252 NT5CQ8TCD5 201 aa18.38■□□□□ 0.53
LIMS2-215ENST00000484252 SPRYD4Q8WW59 207 aaPredicted RBP18.38■□□□□ 0.53
LIMS2-215ENST00000484252 C10orf90Q96M02 699 aa18.38■□□□□ 0.53
LIMS2-215ENST00000484252 TMED9Q9BVK6 235 aa18.38■□□□□ 0.53
LIMS2-215ENST00000484252 SLA2Q9H6Q3 261 aa18.38■□□□□ 0.53
LIMS2-215ENST00000484252 TNFRSF10DQ9UBN6 386 aa18.38■□□□□ 0.53
LIMS2-215ENST00000484252 PHF11Q9UIL8 331 aa18.38■□□□□ 0.53
LIMS2-215ENST00000484252 NDRG2Q9UN36 371 aaKnown RBP18.38■□□□□ 0.53
LIMS2-215ENST00000484252 LAMA3Q16787 3333 aa18.37■□□□□ 0.53
LIMS2-215ENST00000484252 SMIM30A4D0T7 59 aa18.37■□□□□ 0.53
LIMS2-215ENST00000484252 A6NL46 340 aa18.37■□□□□ 0.53
LIMS2-215ENST00000484252 RNGTTO60942 597 aaKnown RBP18.37■□□□□ 0.53
LIMS2-215ENST00000484252 THY1P04216 161 aa18.37■□□□□ 0.53
LIMS2-215ENST00000484252 APODP05090 189 aa18.37■□□□□ 0.53
LIMS2-215ENST00000484252 PRKCAP17252 672 aa18.37■□□□□ 0.53
LIMS2-215ENST00000484252 CELP19835 753 aa18.37■□□□□ 0.53
LIMS2-215ENST00000484252 ATP6V1E1P36543 226 aa18.37■□□□□ 0.53
LIMS2-215ENST00000484252 KIR2DL3P43628 341 aa18.37■□□□□ 0.53
LIMS2-215ENST00000484252 MAP2K3P46734 347 aa18.37■□□□□ 0.53
LIMS2-215ENST00000484252 EVX1P49640 407 aa18.37■□□□□ 0.53
LIMS2-215ENST00000484252 HOXC5Q00444 222 aa18.37■□□□□ 0.53
LIMS2-215ENST00000484252 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.37■□□□□ 0.53
LIMS2-215ENST00000484252 ARHGAP11BQ3KRB8 267 aa18.37■□□□□ 0.53
LIMS2-215ENST00000484252 PSRC1Q6PGN9 363 aaPredicted RBP18.37■□□□□ 0.53
LIMS2-215ENST00000484252 ZNF322Q6U7Q0 402 aaPredicted RBP18.37■□□□□ 0.53
LIMS2-215ENST00000484252 TMEM255BQ8WV15 326 aa18.37■□□□□ 0.53
LIMS2-215ENST00000484252 SYNPO2LQ9H987 977 aa18.37■□□□□ 0.53
LIMS2-215ENST00000484252 TBC1D17Q9HA65 648 aa18.37■□□□□ 0.53
LIMS2-215ENST00000484252 WDR45Q9Y484 360 aa18.37■□□□□ 0.53
LIMS2-215ENST00000484252 HPGDSO60760 199 aa18.37■□□□□ 0.53
LIMS2-215ENST00000484252 SLC19A2O60779 497 aa18.37■□□□□ 0.53
LIMS2-215ENST00000484252 NTN1O95631 604 aa18.37■□□□□ 0.53
LIMS2-215ENST00000484252 THBS1P07996 1170 aa18.37■□□□□ 0.53
LIMS2-215ENST00000484252 CPN2P22792 545 aa18.37■□□□□ 0.53
LIMS2-215ENST00000484252 CAV3P56539 151 aa18.37■□□□□ 0.53
LIMS2-215ENST00000484252 TNFRSF17Q02223 184 aa18.37■□□□□ 0.53
LIMS2-215ENST00000484252 C2orf27AQ580R0 203 aa18.37■□□□□ 0.53
LIMS2-215ENST00000484252 ZNF776Q68DI1 518 aaPredicted RBP18.37■□□□□ 0.53
LIMS2-215ENST00000484252 SIGIRRQ6IA17 410 aa18.37■□□□□ 0.53
LIMS2-215ENST00000484252 FAM111BQ6SJ93 734 aa18.37■□□□□ 0.53
LIMS2-215ENST00000484252 PLET1Q6UQ28 207 aa18.37■□□□□ 0.53
LIMS2-215ENST00000484252 AMIGO1Q86WK6 493 aa18.37■□□□□ 0.53
LIMS2-215ENST00000484252 GALNT12Q8IXK2 581 aa18.37■□□□□ 0.53
LIMS2-215ENST00000484252 Q8N402 240 aa18.37■□□□□ 0.53
LIMS2-215ENST00000484252 SLC16A11Q8NCK7 471 aa18.37■□□□□ 0.53
LIMS2-215ENST00000484252 OR7G2Q8NG99 324 aa18.37■□□□□ 0.53
LIMS2-215ENST00000484252 BRIX1Q8TDN6 353 aaKnown RBP18.37■□□□□ 0.53
LIMS2-215ENST00000484252 ACOT12Q8WYK0 555 aa18.37■□□□□ 0.53
LIMS2-215ENST00000484252 CDS1Q92903 461 aa18.37■□□□□ 0.53
LIMS2-215ENST00000484252 SCARF2Q96GP6 870 aaPredicted RBP18.37■□□□□ 0.53
LIMS2-215ENST00000484252 SECISBP2Q96T21 854 aaKnown RBP18.37■□□□□ 0.53
LIMS2-215ENST00000484252 ARPC5LQ9BPX5 153 aa18.37■□□□□ 0.53
LIMS2-215ENST00000484252 APOOQ9BUR5 198 aa18.37■□□□□ 0.53
LIMS2-215ENST00000484252 HDHD5Q9BXW7 423 aa18.37■□□□□ 0.53
LIMS2-215ENST00000484252 SLC17A9Q9BYT1 436 aa18.37■□□□□ 0.53
LIMS2-215ENST00000484252 NTNG1Q9Y2I2 539 aa18.37■□□□□ 0.53
LIMS2-215ENST00000484252 TRIM3O75382 744 aaPredicted RBP18.36■□□□□ 0.53
LIMS2-215ENST00000484252 YES1P07947 543 aa18.36■□□□□ 0.53
LIMS2-215ENST00000484252 PRKAR1AP10644 381 aa18.36■□□□□ 0.53
LIMS2-215ENST00000484252 APEX1P27695 318 aaKnown RBP18.36■□□□□ 0.53
LIMS2-215ENST00000484252 NDUFS1P28331 727 aa18.36■□□□□ 0.53
LIMS2-215ENST00000484252 IGFALSP35858 605 aa18.36■□□□□ 0.53
LIMS2-215ENST00000484252 RNF144AP50876 292 aaPredicted RBP18.36■□□□□ 0.53
LIMS2-215ENST00000484252 ZNF791Q3KP31 576 aaPredicted RBP18.36■□□□□ 0.53
LIMS2-215ENST00000484252 TANGO2Q6ICL3 276 aa18.36■□□□□ 0.53
LIMS2-215ENST00000484252 GET4Q7L5D6 327 aaPredicted RBP18.36■□□□□ 0.53
LIMS2-215ENST00000484252 ASPGQ86U10 573 aa18.36■□□□□ 0.53
LIMS2-215ENST00000484252 RANBP3LQ86VV4 465 aaPredicted RBP18.36■□□□□ 0.53
LIMS2-215ENST00000484252 OR2L13Q8N349 312 aa18.36■□□□□ 0.53
LIMS2-215ENST00000484252 SUN5Q8TC36 379 aa18.36■□□□□ 0.53
LIMS2-215ENST00000484252 BADQ92934 168 aa18.36■□□□□ 0.53
LIMS2-215ENST00000484252 FN3KQ9H479 309 aa18.36■□□□□ 0.53
LIMS2-215ENST00000484252 SFXN1Q9H9B4 322 aa18.36■□□□□ 0.53
LIMS2-215ENST00000484252 PRDM9Q9NQV7 894 aa18.36■□□□□ 0.53
LIMS2-215ENST00000484252 SLC7A7Q9UM01 511 aa18.36■□□□□ 0.53
LIMS2-215ENST00000484252 TMA7Q9Y2S6 64 aaKnown RBP18.36■□□□□ 0.53
LIMS2-215ENST00000484252 MYO10Q9HD67 2058 aa18.36■□□□□ 0.53
LIMS2-215ENST00000484252 A0A1W2PQU0 124 aa18.35■□□□□ 0.53
LIMS2-215ENST00000484252 A8MV72 311 aaPredicted RBP18.35■□□□□ 0.53
LIMS2-215ENST00000484252 J3QRE1 110 aa18.35■□□□□ 0.53
LIMS2-215ENST00000484252 PIP5K1CO60331 668 aa18.35■□□□□ 0.53
LIMS2-215ENST00000484252 SSTR4P31391 388 aa18.35■□□□□ 0.53
LIMS2-215ENST00000484252 GCGRP47871 477 aa18.35■□□□□ 0.53
LIMS2-215ENST00000484252 C19orf57Q0VDD7 668 aa18.35■□□□□ 0.53
LIMS2-215ENST00000484252 DUSP8Q13202 625 aa18.35■□□□□ 0.53
LIMS2-215ENST00000484252 ZNF836Q6ZNA1 936 aa18.35■□□□□ 0.53
LIMS2-215ENST00000484252 CXXC5Q7LFL8 322 aaKnown RBP18.35■□□□□ 0.53
LIMS2-215ENST00000484252 VN1R4Q7Z5H5 301 aa18.35■□□□□ 0.53
LIMS2-215ENST00000484252 ADGRD2Q7Z7M1 963 aa18.35■□□□□ 0.53
LIMS2-215ENST00000484252 DUSP18Q8NEJ0 188 aa18.35■□□□□ 0.53
LIMS2-215ENST00000484252 OR4K14Q8NGD5 310 aa18.35■□□□□ 0.53
LIMS2-215ENST00000484252 SAMD8Q96LT4 415 aa18.35■□□□□ 0.53
LIMS2-215ENST00000484252 DMRTB1Q96MA1 342 aa18.35■□□□□ 0.53
LIMS2-215ENST00000484252 UBQLN3Q9H347 655 aa18.35■□□□□ 0.53
LIMS2-215ENST00000484252 HINT3Q9NQE9 182 aaKnown RBP18.35■□□□□ 0.53
LIMS2-215ENST00000484252 RBFOX1Q9NWB1 397 aaKnown RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms