RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 CDK10Q15131 360 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 DUSP6Q16828 381 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 MICAQ29983 383 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 LRIT3Q3SXY7 679 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 IQCCQ4KMZ1 466 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 SLC39A12Q504Y0 691 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 PYCR3Q53H96 274 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 ZNF766Q5HY98 468 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 TMEM196Q5HYL7 178 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 ARMC4Q5T2S8 1044 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 FRG2Q64ET8 278 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 TMEM108Q6UXF1 575 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 CCBE1Q6UXH8 406 aaPredicted RBP4.48□□□□□ -1.69
SSBP1-211ENST00000484178 ZNF782Q6ZMW2 699 aaPredicted RBP4.48□□□□□ -1.69
SSBP1-211ENST00000484178 RPS27LQ71UM5 84 aaKnown RBP4.48□□□□□ -1.69
SSBP1-211ENST00000484178 LDB1Q86U70 411 aaPredicted RBP4.48□□□□□ -1.69
SSBP1-211ENST00000484178 RASAL3Q86YV0 1011 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 MSRB3Q8IXL7 192 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 TCTE3Q8IZS6 198 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 PARP16Q8N5Y8 322 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 DCAF4L2Q8NA75 395 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 HJURPQ8NCD3 748 aaPredicted RBP4.48□□□□□ -1.69
SSBP1-211ENST00000484178 LPCAT1Q8NF37 534 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 PROKR2Q8NFJ6 384 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 OR52B6Q8NGF0 335 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 SELENOMQ8WWX9 145 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 IGSF8Q969P0 613 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 AP2M1Q96CW1 435 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 COQ8BQ96D53 544 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 PERPQ96FX8 193 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 ZC3HAV1LQ96H79 300 aaKnown RBP4.48□□□□□ -1.69
SSBP1-211ENST00000484178 MED30Q96HR3 178 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 ZNF48Q96MX3 618 aaPredicted RBP4.48□□□□□ -1.69
SSBP1-211ENST00000484178 FRG2BQ96QU4 278 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 PANX1Q96RD7 426 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 PIP5K1AQ99755 562 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 TMEM175Q9BSA9 504 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 MND1Q9BWT6 205 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 TEX12Q9BXU0 123 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 MRPL9Q9BYD2 267 aaKnown RBP4.48□□□□□ -1.69
SSBP1-211ENST00000484178 CIPCQ9C0C6 399 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 C6orf62Q9GZU0 229 aaPredicted RBP4.48□□□□□ -1.69
SSBP1-211ENST00000484178 ARMC7Q9H6L4 198 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 ABCB10Q9NRK6 738 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 DNAJC11Q9NVH1 559 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 HCN3Q9P1Z3 774 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 VPS29Q9UBQ0 182 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 CD207Q9UJ71 328 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 SNX7Q9UNH6 387 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 MGAT4BQ9UQ53 548 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 ANGPT4Q9Y264 503 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 SLC27A6Q9Y2P4 619 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 CAB39Q9Y376 341 aaPredicted RBP4.48□□□□□ -1.69
SSBP1-211ENST00000484178 PPIL1Q9Y3C6 166 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 NEUROG3Q9Y4Z2 214 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 PTGDR2Q9Y5Y4 395 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 PATJQ8NI35 1801 aa4.48□□□□□ -1.69
SSBP1-211ENST00000484178 SBF1O95248 1867 aa4.47□□□□□ -1.69
SSBP1-211ENST00000484178 TRIP11Q15643 1979 aa4.47□□□□□ -1.69
SSBP1-211ENST00000484178 IGLV3-16A0A075B6K0 115 aa4.47□□□□□ -1.69
SSBP1-211ENST00000484178 KCNE1BA0A087WTH5 132 aa4.47□□□□□ -1.69
SSBP1-211ENST00000484178 CCL15-CCL14A0A0B4J2E2 113 aa4.47□□□□□ -1.69
SSBP1-211ENST00000484178 GLYATL1P3A0A0U1RQE8 302 aa4.47□□□□□ -1.69
SSBP1-211ENST00000484178 CCDC182A6NF36 153 aa4.47□□□□□ -1.69
SSBP1-211ENST00000484178 NCF1BA6NI72 391 aaPredicted RBP4.47□□□□□ -1.69
SSBP1-211ENST00000484178 NCF1CA8MVU1 366 aaPredicted RBP4.47□□□□□ -1.69
SSBP1-211ENST00000484178 LOC730098B7Z3J9 87 aa4.47□□□□□ -1.69
SSBP1-211ENST00000484178 FOXE1O00358 373 aaPredicted RBP4.47□□□□□ -1.69
SSBP1-211ENST00000484178 TAPBPO15533 448 aa4.47□□□□□ -1.69
SSBP1-211ENST00000484178 SMAD6O43541 496 aaKnown RBP4.47□□□□□ -1.69
SSBP1-211ENST00000484178 XPNPEP2O43895 674 aa4.47□□□□□ -1.69
SSBP1-211ENST00000484178 PRKYO43930 277 aa4.47□□□□□ -1.69
SSBP1-211ENST00000484178 TBX19O60806 448 aa4.47□□□□□ -1.69
SSBP1-211ENST00000484178 WBP4O75554 376 aaKnown RBP4.47□□□□□ -1.69
SSBP1-211ENST00000484178 CCNB2O95067 398 aa4.47□□□□□ -1.69
SSBP1-211ENST00000484178 SLC25A14O95258 325 aaPredicted RBP4.47□□□□□ -1.69
SSBP1-211ENST00000484178 MT-ND1P03886 318 aa4.47□□□□□ -1.69
SSBP1-211ENST00000484178 ALPPP05187 535 aa4.47□□□□□ -1.69
SSBP1-211ENST00000484178 ACP5P13686 325 aa4.47□□□□□ -1.69
SSBP1-211ENST00000484178 COX7A2P14406 83 aa4.47□□□□□ -1.69
SSBP1-211ENST00000484178 ENGP17813 658 aa4.47□□□□□ -1.69
SSBP1-211ENST00000484178 GSTM3P21266 225 aa4.47□□□□□ -1.69
SSBP1-211ENST00000484178 CPN2P22792 545 aa4.47□□□□□ -1.69
SSBP1-211ENST00000484178 PRDX3P30048 256 aaKnown RBP4.47□□□□□ -1.69
SSBP1-211ENST00000484178 HOXA9P31269 272 aa4.47□□□□□ -1.69
SSBP1-211ENST00000484178 PRKAR1BP31321 381 aa4.47□□□□□ -1.69
SSBP1-211ENST00000484178 FMO3P31513 532 aa4.47□□□□□ -1.69
SSBP1-211ENST00000484178 GRK5P34947 590 aa4.47□□□□□ -1.69
SSBP1-211ENST00000484178 IFNGR2P38484 337 aa4.47□□□□□ -1.69
SSBP1-211ENST00000484178 SLC6A12P48065 614 aa4.47□□□□□ -1.69
SSBP1-211ENST00000484178 HTR6P50406 440 aa4.47□□□□□ -1.69
SSBP1-211ENST00000484178 NCS1P62166 190 aa4.47□□□□□ -1.69
SSBP1-211ENST00000484178 POLR2LP62875 67 aaKnown RBP4.47□□□□□ -1.69
SSBP1-211ENST00000484178 IFITM3Q01628 133 aa4.47□□□□□ -1.69
SSBP1-211ENST00000484178 BCL2L1Q07817 233 aa4.47□□□□□ -1.69
SSBP1-211ENST00000484178 ACSM2AQ08AH3 577 aa4.47□□□□□ -1.69
SSBP1-211ENST00000484178 MLLT11Q13015 90 aaPredicted RBP4.47□□□□□ -1.69
SSBP1-211ENST00000484178 PPIGQ13427 754 aaKnown RBP eCLIP4.47□□□□□ -1.69
SSBP1-211ENST00000484178 GPR50Q13585 617 aa4.47□□□□□ -1.69
SSBP1-211ENST00000484178 DNASE1L3Q13609 305 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms