RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 TMPRSS3P57727 454 aa10.73□□□□□ -0.69
HPS4-212ENST00000481910 CAPRIN1Q14444 709 aaKnown RBP10.73□□□□□ -0.69
HPS4-212ENST00000481910 LASP1Q14847 261 aaKnown RBP10.73□□□□□ -0.69
HPS4-212ENST00000481910 HLA-DQA1Q5Y7H0 255 aa10.73□□□□□ -0.69
HPS4-212ENST00000481910 POMZP3Q6PJE2 187 aa10.73□□□□□ -0.69
HPS4-212ENST00000481910 MSRB3Q8IXL7 192 aa10.73□□□□□ -0.69
HPS4-212ENST00000481910 C9orf40Q8IXQ3 194 aa10.73□□□□□ -0.69
HPS4-212ENST00000481910 KDF1Q8NAX2 398 aaPredicted RBP10.73□□□□□ -0.69
HPS4-212ENST00000481910 FANK1Q8TC84 345 aa10.73□□□□□ -0.69
HPS4-212ENST00000481910 PNPT1Q8TCS8 783 aaKnown RBP10.73□□□□□ -0.69
HPS4-212ENST00000481910 ZFP90Q8TF47 636 aa10.73□□□□□ -0.69
HPS4-212ENST00000481910 THAP3Q8WTV1 239 aaPredicted RBP10.73□□□□□ -0.69
HPS4-212ENST00000481910 ROPN1LQ96C74 230 aa10.73□□□□□ -0.69
HPS4-212ENST00000481910 THOC3Q96J01 351 aaKnown RBP10.73□□□□□ -0.69
HPS4-212ENST00000481910 YIPF4Q9BSR8 244 aa10.73□□□□□ -0.69
HPS4-212ENST00000481910 KCNN2Q9H2S1 579 aa10.73□□□□□ -0.69
HPS4-212ENST00000481910 PLGRKTQ9HBL7 147 aa10.73□□□□□ -0.69
HPS4-212ENST00000481910 DIABLOQ9NR28 239 aa10.73□□□□□ -0.69
HPS4-212ENST00000481910 DTX4Q9Y2E6 619 aa10.73□□□□□ -0.69
HPS4-212ENST00000481910 HEMK1Q9Y5R4 338 aaPredicted RBP10.73□□□□□ -0.69
HPS4-212ENST00000481910 IGF2RP11717 2491 aa10.73□□□□□ -0.69
HPS4-212ENST00000481910 ASPMQ8IZT6 3477 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 DOCK10Q96BY6 2186 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 A0A1B0GWJ7 208 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 FUOMA2VDF0 154 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 A8MUI8 341 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 K7ENP7 123 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 PRKNO60260 465 aaPredicted RBP10.72□□□□□ -0.69
HPS4-212ENST00000481910 CLN5O75503 358 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 ZFAND5O76080 213 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 PSMG1O95456 288 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 C1QCP02747 245 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 KRT16P08779 473 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 ITGAMP11215 1152 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 HOXB9P17482 250 aaPredicted RBP10.72□□□□□ -0.69
HPS4-212ENST00000481910 PRIM2P49643 509 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 BCAP31P51572 246 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 RPS26P62854 115 aaKnown RBP10.72□□□□□ -0.69
HPS4-212ENST00000481910 FOXK2Q01167 660 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 CHAF1BQ13112 559 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 SAXO2Q658L1 398 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 MFSD12Q6NUT3 480 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 INO80CQ6PI98 192 aaPredicted RBP10.72□□□□□ -0.69
HPS4-212ENST00000481910 WDR53Q7Z5U6 358 aaPredicted RBP10.72□□□□□ -0.69
HPS4-212ENST00000481910 NET1Q7Z628 596 aaPredicted RBP10.72□□□□□ -0.69
HPS4-212ENST00000481910 RNF130Q86XS8 419 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 OR5L2Q8NGL0 311 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 OR8K3Q8NH51 312 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 JADE3Q92613 823 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 NEURL3Q96EH8 262 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 C16orf58Q96GQ5 468 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 GAL3ST4Q96RP7 486 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 THUMPD3Q9BV44 507 aaKnown RBP10.72□□□□□ -0.69
HPS4-212ENST00000481910 LIN28AQ9H9Z2 209 aaKnown RBP10.72□□□□□ -0.69
HPS4-212ENST00000481910 FOLH1BQ9HBA9 442 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 GPATCH2Q9NW75 528 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 CACNG2Q9Y698 323 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 CELSR3Q9NYQ7 3312 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 TRBV5-3A0A0A0MS03 114 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 EVPLLA8MZ36 301 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 B2RBV5 119 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 ALX3O95076 343 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 UNC5CO95185 931 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 MATN1P21941 496 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 CRATP43155 626 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 P2RX3P56373 397 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 RPS3AP61247 264 aaKnown RBP10.72□□□□□ -0.69
HPS4-212ENST00000481910 ZNF155Q12901 538 aaPredicted RBP10.72□□□□□ -0.69
HPS4-212ENST00000481910 EBPQ15125 230 aaKnown RBP10.72□□□□□ -0.69
HPS4-212ENST00000481910 ZNHIT3Q15649 155 aaPredicted RBP10.72□□□□□ -0.69
HPS4-212ENST00000481910 TSC22D1Q15714 1073 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 OCLNQ16625 522 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 RUNDC3AQ59EK9 446 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 IRAK1BP1Q5VVH5 260 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 NANOGP8Q6NSW7 305 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 ZCCHC12Q6PEW1 402 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 ARHGAP24Q8N264 748 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 CDRT4Q8N9R6 151 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 SLC35G5Q96KT7 338 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 VSTM2LQ96N03 204 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 ITPAQ9BY32 194 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 ACTRT3Q9BYD9 372 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 WWTR1Q9GZV5 400 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 EPS8L2Q9H6S3 715 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 NANOGQ9H9S0 305 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 STMN3Q9NZ72 180 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 KCNMB2Q9Y691 235 aa10.72□□□□□ -0.69
HPS4-212ENST00000481910 A6NL46 340 aa10.71□□□□□ -0.69
HPS4-212ENST00000481910 FXYD1O00168 92 aa10.71□□□□□ -0.69
HPS4-212ENST00000481910 AGR2O95994 175 aa10.71□□□□□ -0.69
HPS4-212ENST00000481910 PPIBP23284 216 aaKnown RBP10.71□□□□□ -0.69
HPS4-212ENST00000481910 EIF2B2P49770 351 aaKnown RBP10.71□□□□□ -0.69
HPS4-212ENST00000481910 GDI2P50395 445 aaKnown RBP10.71□□□□□ -0.69
HPS4-212ENST00000481910 CCL11P51671 97 aa10.71□□□□□ -0.69
HPS4-212ENST00000481910 MTPNP58546 118 aa10.71□□□□□ -0.69
HPS4-212ENST00000481910 GNG2P59768 71 aa10.71□□□□□ -0.69
HPS4-212ENST00000481910 CXADRP78310 365 aa10.71□□□□□ -0.69
HPS4-212ENST00000481910 PSG6Q00889 435 aa10.71□□□□□ -0.69
HPS4-212ENST00000481910 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.71□□□□□ -0.69
HPS4-212ENST00000481910 TCTN3Q6NUS6 607 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms