RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 RPS18P62269 152 aaKnown RBP9.37□□□□□ -0.91
USP39-215ENST00000481409 KCNJ10P78508 379 aa9.37□□□□□ -0.91
USP39-215ENST00000481409 SLC34A1Q06495 639 aa9.37□□□□□ -0.91
USP39-215ENST00000481409 CLN3Q13286 438 aa9.37□□□□□ -0.91
USP39-215ENST00000481409 SNTA1Q13424 505 aa9.37□□□□□ -0.91
USP39-215ENST00000481409 IL10RAQ13651 578 aa9.37□□□□□ -0.91
USP39-215ENST00000481409 RCN1Q15293 331 aa9.37□□□□□ -0.91
USP39-215ENST00000481409 GPR68Q15743 365 aa9.37□□□□□ -0.91
USP39-215ENST00000481409 MEP1AQ16819 746 aa9.37□□□□□ -0.91
USP39-215ENST00000481409 DUSP7Q16829 419 aa9.37□□□□□ -0.91
USP39-215ENST00000481409 RPS26P11Q5JNZ5 115 aaPredicted RBP9.37□□□□□ -0.91
USP39-215ENST00000481409 DCAF10Q5QP82 559 aa9.37□□□□□ -0.91
USP39-215ENST00000481409 FIGNL1Q6PIW4 674 aa9.37□□□□□ -0.91
USP39-215ENST00000481409 ERMP1Q7Z2K6 904 aa9.37□□□□□ -0.91
USP39-215ENST00000481409 WDR53Q7Z5U6 358 aaPredicted RBP9.37□□□□□ -0.91
USP39-215ENST00000481409 CYP4Z1Q86W10 505 aa9.37□□□□□ -0.91
USP39-215ENST00000481409 RPS19BP1Q86WX3 136 aaKnown RBP9.37□□□□□ -0.91
USP39-215ENST00000481409 ZDHHC21Q8IVQ6 265 aa9.37□□□□□ -0.91
USP39-215ENST00000481409 PQLC1Q8N2U9 271 aa9.37□□□□□ -0.91
USP39-215ENST00000481409 CATSPER1Q8NEC5 780 aa9.37□□□□□ -0.91
USP39-215ENST00000481409 TOR1AIP2Q8NFQ8 470 aa9.37□□□□□ -0.91
USP39-215ENST00000481409 DOK4Q8TEW6 326 aa9.37□□□□□ -0.91
USP39-215ENST00000481409 KCNE4Q8WWG9 221 aa9.37□□□□□ -0.91
USP39-215ENST00000481409 PYDC1Q8WXC3 89 aa9.37□□□□□ -0.91
USP39-215ENST00000481409 TMBIM1Q969X1 311 aa9.37□□□□□ -0.91
USP39-215ENST00000481409 RNF31Q96EP0 1072 aa9.37□□□□□ -0.91
USP39-215ENST00000481409 TPD52L3Q96J77 140 aa9.37□□□□□ -0.91
USP39-215ENST00000481409 CHID1Q9BWS9 393 aa9.37□□□□□ -0.91
USP39-215ENST00000481409 VCX3BQ9H321 246 aa9.37□□□□□ -0.91
USP39-215ENST00000481409 ZNF160Q9HCG1 818 aa9.37□□□□□ -0.91
USP39-215ENST00000481409 EXOSC3Q9NQT5 275 aaKnown RBP9.37□□□□□ -0.91
USP39-215ENST00000481409 ABI3Q9P2A4 366 aa9.37□□□□□ -0.91
USP39-215ENST00000481409 KLK13Q9UKR3 277 aa9.37□□□□□ -0.91
USP39-215ENST00000481409 ZNF443Q9Y2A4 671 aaPredicted RBP9.37□□□□□ -0.91
USP39-215ENST00000481409 FAM32AQ9Y421 112 aaKnown RBP9.37□□□□□ -0.91
USP39-215ENST00000481409 CEP250Q9BV73 2442 aa9.37□□□□□ -0.91
USP39-215ENST00000481409 CDHR4A6H8M9 788 aa9.36□□□□□ -0.91
USP39-215ENST00000481409 TMEM200CA6NKL6 621 aa9.36□□□□□ -0.91
USP39-215ENST00000481409 TMEM229AB2RXF0 380 aa9.36□□□□□ -0.91
USP39-215ENST00000481409 ALG1L2C9J202 215 aa9.36□□□□□ -0.91
USP39-215ENST00000481409 H3BNX3 289 aa9.36□□□□□ -0.91
USP39-215ENST00000481409 ADAMDEC1O15204 470 aa9.36□□□□□ -0.91
USP39-215ENST00000481409 UGT2B17O75795 530 aa9.36□□□□□ -0.91
USP39-215ENST00000481409 DNAJB5O75953 348 aa9.36□□□□□ -0.91
USP39-215ENST00000481409 KRT36O76013 467 aa9.36□□□□□ -0.91
USP39-215ENST00000481409 ZIC2O95409 532 aaPredicted RBP9.36□□□□□ -0.91
USP39-215ENST00000481409 NADKO95544 446 aaPredicted RBP9.36□□□□□ -0.91
USP39-215ENST00000481409 ANPEPP15144 967 aa9.36□□□□□ -0.91
USP39-215ENST00000481409 RHCEP18577 417 aa9.36□□□□□ -0.91
USP39-215ENST00000481409 GCKP35557 465 aa9.36□□□□□ -0.91
USP39-215ENST00000481409 SSR4P51571 173 aa9.36□□□□□ -0.91
USP39-215ENST00000481409 ARHGDIAP52565 204 aa9.36□□□□□ -0.91
USP39-215ENST00000481409 FOXL2P58012 376 aa9.36□□□□□ -0.91
USP39-215ENST00000481409 MLF1P58340 268 aa9.36□□□□□ -0.91
USP39-215ENST00000481409 EEF1A1P68104 462 aaKnown RBP9.36□□□□□ -0.91
USP39-215ENST00000481409 FGFBP1Q14512 234 aa9.36□□□□□ -0.91
USP39-215ENST00000481409 ATP6AP1Q15904 470 aa9.36□□□□□ -0.91
USP39-215ENST00000481409 NTRK2Q16620 822 aa9.36□□□□□ -0.91
USP39-215ENST00000481409 NRF1Q16656 503 aa9.36□□□□□ -0.91
USP39-215ENST00000481409 GLIPR1L2Q4G1C9 344 aa9.36□□□□□ -0.91
USP39-215ENST00000481409 KLHL26Q53HC5 615 aa9.36□□□□□ -0.91
USP39-215ENST00000481409 CCNJQ5T5M9 372 aa9.36□□□□□ -0.91
USP39-215ENST00000481409 ENPP6Q6UWR7 440 aa9.36□□□□□ -0.91
USP39-215ENST00000481409 ZNF550Q7Z398 422 aa9.36□□□□□ -0.91
USP39-215ENST00000481409 MARCH9Q86YJ5 346 aa9.36□□□□□ -0.91
USP39-215ENST00000481409 OR4N2Q8NGD1 307 aa9.36□□□□□ -0.91
USP39-215ENST00000481409 RNF138Q8WVD3 245 aa9.36□□□□□ -0.91
USP39-215ENST00000481409 APOBEC4Q8WW27 367 aaKnown RBP9.36□□□□□ -0.91
USP39-215ENST00000481409 SLCO4A1Q96BD0 722 aa9.36□□□□□ -0.91
USP39-215ENST00000481409 DTNBP1Q96EV8 351 aa9.36□□□□□ -0.91
USP39-215ENST00000481409 NRBF2Q96F24 287 aa9.36□□□□□ -0.91
USP39-215ENST00000481409 OTUB1Q96FW1 271 aaPredicted RBP9.36□□□□□ -0.91
USP39-215ENST00000481409 CENPNQ96H22 339 aaPredicted RBP9.36□□□□□ -0.91
USP39-215ENST00000481409 C7orf34Q96L11 122 aa9.36□□□□□ -0.91
USP39-215ENST00000481409 SGCZQ96LD1 299 aa9.36□□□□□ -0.91
USP39-215ENST00000481409 SEPHS2Q99611 448 aa9.36□□□□□ -0.91
USP39-215ENST00000481409 ARHGDIGQ99819 225 aa9.36□□□□□ -0.91
USP39-215ENST00000481409 LHPPQ9H008 270 aa9.36□□□□□ -0.91
USP39-215ENST00000481409 SDHAF3Q9NRP4 125 aa9.36□□□□□ -0.91
USP39-215ENST00000481409 AGPAT4Q9NRZ5 378 aa9.36□□□□□ -0.91
USP39-215ENST00000481409 DNAJB9Q9UBS3 223 aa9.36□□□□□ -0.91
USP39-215ENST00000481409 IL17BQ9UHF5 180 aa9.36□□□□□ -0.91
USP39-215ENST00000481409 POLHQ9Y253 713 aa9.36□□□□□ -0.91
USP39-215ENST00000481409 SERINC4A6NH21 518 aa9.35□□□□□ -0.91
USP39-215ENST00000481409 FAAHO00519 579 aa9.35□□□□□ -0.91
USP39-215ENST00000481409 CASQ2O14958 399 aaPredicted RBP9.35□□□□□ -0.91
USP39-215ENST00000481409 CLOCKO15516 846 aa9.35□□□□□ -0.91
USP39-215ENST00000481409 PRKNO60260 465 aaPredicted RBP9.35□□□□□ -0.91
USP39-215ENST00000481409 EIF4E2O60573 245 aaKnown RBP9.35□□□□□ -0.91
USP39-215ENST00000481409 ITGA10O75578 1167 aa9.35□□□□□ -0.91
USP39-215ENST00000481409 PRSS23O95084 383 aa9.35□□□□□ -0.91
USP39-215ENST00000481409 UTS2O95399 124 aa9.35□□□□□ -0.91
USP39-215ENST00000481409 OXSR1O95747 527 aaPredicted RBP9.35□□□□□ -0.91
USP39-215ENST00000481409 CST1P01037 141 aa9.35□□□□□ -0.91
USP39-215ENST00000481409 LDLRP01130 860 aa9.35□□□□□ -0.91
USP39-215ENST00000481409 IGKV1D-16P01601 117 aa9.35□□□□□ -0.91
USP39-215ENST00000481409 OPN1SWP03999 348 aa9.35□□□□□ -0.91
USP39-215ENST00000481409 ADRB1P08588 477 aa9.35□□□□□ -0.91
USP39-215ENST00000481409 THRBP10828 461 aa9.35□□□□□ -0.91
USP39-215ENST00000481409 UQCRBP14927 111 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms