RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 DCST1Q5T197 706 aa10.37□□□□□ -0.75
CCM2-213ENST00000480658 PDSS1Q5T2R2 415 aa10.37□□□□□ -0.75
CCM2-213ENST00000480658 MFSD12Q6NUT3 480 aa10.37□□□□□ -0.75
CCM2-213ENST00000480658 WDR75Q8IWA0 830 aaKnown RBP10.37□□□□□ -0.75
CCM2-213ENST00000480658 LRRN4CLQ8ND94 238 aa10.37□□□□□ -0.75
CCM2-213ENST00000480658 VPS37AQ8NEZ2 397 aa10.37□□□□□ -0.75
CCM2-213ENST00000480658 OR2M3Q8NG83 312 aa10.37□□□□□ -0.75
CCM2-213ENST00000480658 OR4N2Q8NGD1 307 aa10.37□□□□□ -0.75
CCM2-213ENST00000480658 PSMA8Q8TAA3 256 aa10.37□□□□□ -0.75
CCM2-213ENST00000480658 SFXN5Q8TD22 340 aa10.37□□□□□ -0.75
CCM2-213ENST00000480658 OR5P2Q8WZ92 322 aa10.37□□□□□ -0.75
CCM2-213ENST00000480658 SLC9A6Q92581 669 aa10.37□□□□□ -0.75
CCM2-213ENST00000480658 JADE3Q92613 823 aa10.37□□□□□ -0.75
CCM2-213ENST00000480658 ARL8AQ96BM9 186 aa10.37□□□□□ -0.75
CCM2-213ENST00000480658 DACH2Q96NX9 599 aa10.37□□□□□ -0.75
CCM2-213ENST00000480658 SLC39A3Q9BRY0 314 aa10.37□□□□□ -0.75
CCM2-213ENST00000480658 BTBD2Q9BX70 525 aa10.37□□□□□ -0.75
CCM2-213ENST00000480658 BHLHE41Q9C0J9 482 aaPredicted RBP10.37□□□□□ -0.75
CCM2-213ENST00000480658 EQTNQ9NQ60 294 aa10.37□□□□□ -0.75
CCM2-213ENST00000480658 GLRX2Q9NS18 164 aa10.37□□□□□ -0.75
CCM2-213ENST00000480658 RASSF1Q9NS23 344 aa10.37□□□□□ -0.75
CCM2-213ENST00000480658 ZCCHC3Q9NUD5 404 aaKnown RBP10.37□□□□□ -0.75
CCM2-213ENST00000480658 ASIC5Q9NY37 505 aa10.37□□□□□ -0.75
CCM2-213ENST00000480658 FAF1Q9UNN5 650 aaPredicted RBP10.37□□□□□ -0.75
CCM2-213ENST00000480658 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.37□□□□□ -0.75
CCM2-213ENST00000480658 ARHGAP21Q5T5U3 1957 aa10.37□□□□□ -0.75
CCM2-213ENST00000480658 ZNF407Q9C0G0 2248 aa10.37□□□□□ -0.75
CCM2-213ENST00000480658 CSMD2Q7Z408 3487 aa10.36□□□□□ -0.75
CCM2-213ENST00000480658 OTOGQ6ZRI0 2925 aa10.36□□□□□ -0.75
CCM2-213ENST00000480658 A0A1W2PRB8 838 aa10.36□□□□□ -0.75
CCM2-213ENST00000480658 C2orf72A6NCS6 295 aa10.36□□□□□ -0.75
CCM2-213ENST00000480658 CASKO14936 926 aa10.36□□□□□ -0.75
CCM2-213ENST00000480658 AGR2O95994 175 aa10.36□□□□□ -0.75
CCM2-213ENST00000480658 CHRNGP07510 517 aa10.36□□□□□ -0.75
CCM2-213ENST00000480658 BPGMP07738 259 aa10.36□□□□□ -0.75
CCM2-213ENST00000480658 PABPC4LP0CB38 370 aaKnown RBP10.36□□□□□ -0.75
CCM2-213ENST00000480658 ELK4P28324 431 aa10.36□□□□□ -0.75
CCM2-213ENST00000480658 MAP3K8P41279 467 aa10.36□□□□□ -0.75
CCM2-213ENST00000480658 RFX3P48380 749 aa10.36□□□□□ -0.75
CCM2-213ENST00000480658 PRKAG1P54619 331 aa10.36□□□□□ -0.75
CCM2-213ENST00000480658 SUMO3P55854 103 aaPredicted RBP10.36□□□□□ -0.75
CCM2-213ENST00000480658 POU6F2P78424 691 aaPredicted RBP10.36□□□□□ -0.75
CCM2-213ENST00000480658 LRRC74AQ0VAA2 488 aa10.36□□□□□ -0.75
CCM2-213ENST00000480658 STX5Q13190 355 aa10.36□□□□□ -0.75
CCM2-213ENST00000480658 UGT3A2Q3SY77 523 aa10.36□□□□□ -0.75
CCM2-213ENST00000480658 SPDYE7PQ495Y7 208 aa10.36□□□□□ -0.75
CCM2-213ENST00000480658 GTF2IRD2BQ6EKJ0 949 aa10.36□□□□□ -0.75
CCM2-213ENST00000480658 ZNF551Q7Z340 670 aaPredicted RBP10.36□□□□□ -0.75
CCM2-213ENST00000480658 GTF2IRD2Q86UP8 949 aa10.36□□□□□ -0.75
CCM2-213ENST00000480658 NUDCD3Q8IVD9 361 aa10.36□□□□□ -0.75
CCM2-213ENST00000480658 ZZZ3Q8IYH5 903 aa10.36□□□□□ -0.75
CCM2-213ENST00000480658 C9orf106Q8NAJ2 232 aa10.36□□□□□ -0.75
CCM2-213ENST00000480658 OR2T11Q8NH01 316 aa10.36□□□□□ -0.75
CCM2-213ENST00000480658 OR2W6PQ8NHA6 318 aa10.36□□□□□ -0.75
CCM2-213ENST00000480658 DUSP19Q8WTR2 217 aa10.36□□□□□ -0.75
CCM2-213ENST00000480658 SMPDL3BQ92485 455 aa10.36□□□□□ -0.75
CCM2-213ENST00000480658 TUBGCP3Q96CW5 907 aa10.36□□□□□ -0.75
CCM2-213ENST00000480658 PKNOX2Q96KN3 472 aa10.36□□□□□ -0.75
CCM2-213ENST00000480658 EGLN2Q96KS0 407 aa10.36□□□□□ -0.75
CCM2-213ENST00000480658 YIPF4Q9BSR8 244 aa10.36□□□□□ -0.75
CCM2-213ENST00000480658 RBM24Q9BX46 236 aaKnown RBP10.36□□□□□ -0.75
CCM2-213ENST00000480658 DSN1Q9H410 356 aa10.36□□□□□ -0.75
CCM2-213ENST00000480658 PIGUQ9H490 435 aa10.36□□□□□ -0.75
CCM2-213ENST00000480658 TUBB1Q9H4B7 451 aa10.36□□□□□ -0.75
CCM2-213ENST00000480658 TIGARQ9NQ88 270 aa10.36□□□□□ -0.75
CCM2-213ENST00000480658 ELOVL5Q9NYP7 299 aa10.36□□□□□ -0.75
CCM2-213ENST00000480658 ZNF226Q9NYT6 803 aa10.36□□□□□ -0.75
CCM2-213ENST00000480658 CRIM1Q9NZV1 1036 aa10.36□□□□□ -0.75
CCM2-213ENST00000480658 MCTS1Q9ULC4 181 aaKnown RBP10.36□□□□□ -0.75
CCM2-213ENST00000480658 PCDHGB4Q9UN71 923 aa10.36□□□□□ -0.75
CCM2-213ENST00000480658 RPH3AQ9Y2J0 694 aaPredicted RBP10.36□□□□□ -0.75
CCM2-213ENST00000480658 FBN2P35556 2912 aa10.36□□□□□ -0.75
CCM2-213ENST00000480658 FAM221AA4D161 298 aa10.35□□□□□ -0.75
CCM2-213ENST00000480658 AKAP10O43572 662 aa10.35□□□□□ -0.75
CCM2-213ENST00000480658 TYROBPO43914 113 aa10.35□□□□□ -0.75
CCM2-213ENST00000480658 ZNF500O60304 480 aaPredicted RBP10.35□□□□□ -0.75
CCM2-213ENST00000480658 ZIC3O60481 467 aa10.35□□□□□ -0.75
CCM2-213ENST00000480658 KCNK2O95069 426 aa10.35□□□□□ -0.75
CCM2-213ENST00000480658 SERPINE1P05121 402 aa10.35□□□□□ -0.75
CCM2-213ENST00000480658 DNASE1P24855 282 aa10.35□□□□□ -0.75
CCM2-213ENST00000480658 ADH6P28332 368 aa10.35□□□□□ -0.75
CCM2-213ENST00000480658 DLX5P56178 289 aa10.35□□□□□ -0.75
CCM2-213ENST00000480658 TXNL4AP83876 142 aaKnown RBP10.35□□□□□ -0.75
CCM2-213ENST00000480658 SGCBQ16585 318 aa10.35□□□□□ -0.75
CCM2-213ENST00000480658 DESI1Q6ICB0 168 aa10.35□□□□□ -0.75
CCM2-213ENST00000480658 OR5M10Q6IEU7 315 aa10.35□□□□□ -0.75
CCM2-213ENST00000480658 POMZP3Q6PJE2 187 aa10.35□□□□□ -0.75
CCM2-213ENST00000480658 GTPBP8Q8N3Z3 284 aaPredicted RBP10.35□□□□□ -0.75
CCM2-213ENST00000480658 METTL25Q8N6Q8 603 aa10.35□□□□□ -0.75
CCM2-213ENST00000480658 ADAMTS15Q8TE58 950 aa10.35□□□□□ -0.75
CCM2-213ENST00000480658 CIDECQ96AQ7 238 aaPredicted RBP10.35□□□□□ -0.75
CCM2-213ENST00000480658 INTS12Q96CB8 462 aaKnown RBP10.35□□□□□ -0.75
CCM2-213ENST00000480658 FAM120BQ96EK7 910 aaKnown RBP10.35□□□□□ -0.75
CCM2-213ENST00000480658 CHMP6Q96FZ7 201 aa10.35□□□□□ -0.75
CCM2-213ENST00000480658 FOXC2Q99958 501 aa10.35□□□□□ -0.75
CCM2-213ENST00000480658 MECRQ9BV79 373 aa10.35□□□□□ -0.75
CCM2-213ENST00000480658 ACTRT3Q9BYD9 372 aa10.35□□□□□ -0.75
CCM2-213ENST00000480658 TNFRSF12AQ9NP84 129 aa10.35□□□□□ -0.75
CCM2-213ENST00000480658 SLC17A7Q9P2U7 560 aa10.35□□□□□ -0.75
CCM2-213ENST00000480658 ITGB1BP2Q9UKP3 347 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms