RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 COX18Q8N8Q8 333 aa11.2□□□□□ -0.62
TRA2B-212ENST00000480461 GOLM1Q8NBJ4 401 aa11.2□□□□□ -0.62
TRA2B-212ENST00000480461 SLC38A5Q8WUX1 472 aa11.2□□□□□ -0.62
TRA2B-212ENST00000480461 MAL2Q969L2 176 aa11.2□□□□□ -0.62
TRA2B-212ENST00000480461 PNPLA2Q96AD5 504 aa11.2□□□□□ -0.62
TRA2B-212ENST00000480461 GPATCH1Q9BRR8 931 aaKnown RBP11.2□□□□□ -0.62
TRA2B-212ENST00000480461 ANGPTL4Q9BY76 406 aa11.2□□□□□ -0.62
TRA2B-212ENST00000480461 RUBCNLQ9H714 662 aa11.2□□□□□ -0.62
TRA2B-212ENST00000480461 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.2□□□□□ -0.62
TRA2B-212ENST00000480461 USP22Q9UPT9 525 aa11.2□□□□□ -0.62
TRA2B-212ENST00000480461 PCDHGB6Q9Y5F9 930 aa11.2□□□□□ -0.62
TRA2B-212ENST00000480461 PCDHGA10Q9Y5H3 936 aa11.2□□□□□ -0.62
TRA2B-212ENST00000480461 PRRC2CQ9Y520 2896 aaKnown RBP11.2□□□□□ -0.62
TRA2B-212ENST00000480461 POLQO75417 2590 aa11.2□□□□□ -0.62
TRA2B-212ENST00000480461 NPIPA5A0A0B4J1W7 369 aa11.19□□□□□ -0.62
TRA2B-212ENST00000480461 ANKRD33BA6NCL7 494 aa11.19□□□□□ -0.62
TRA2B-212ENST00000480461 WIPF3A6NGB9 483 aa11.19□□□□□ -0.62
TRA2B-212ENST00000480461 DUXAA6NLW8 204 aa11.19□□□□□ -0.62
TRA2B-212ENST00000480461 BBIP1A8MTZ0 92 aa11.19□□□□□ -0.62
TRA2B-212ENST00000480461 NPIPA7E9PJI5 369 aa11.19□□□□□ -0.62
TRA2B-212ENST00000480461 ASNA1O43681 348 aa11.19□□□□□ -0.62
TRA2B-212ENST00000480461 PEX1O43933 1283 aa11.19□□□□□ -0.62
TRA2B-212ENST00000480461 TRIM3O75382 744 aaPredicted RBP11.19□□□□□ -0.62
TRA2B-212ENST00000480461 UTS2O95399 124 aa11.19□□□□□ -0.62
TRA2B-212ENST00000480461 CBX6O95503 412 aa11.19□□□□□ -0.62
TRA2B-212ENST00000480461 NPPAP01160 153 aa11.19□□□□□ -0.62
TRA2B-212ENST00000480461 CHRM4P08173 479 aa11.19□□□□□ -0.62
TRA2B-212ENST00000480461 KRT16P08779 473 aa11.19□□□□□ -0.62
TRA2B-212ENST00000480461 NPIPA8P0DM63 369 aa11.19□□□□□ -0.62
TRA2B-212ENST00000480461 CD46P15529 392 aa11.19□□□□□ -0.62
TRA2B-212ENST00000480461 SLC6A2P23975 617 aa11.19□□□□□ -0.62
TRA2B-212ENST00000480461 DNASE1L1P49184 302 aa11.19□□□□□ -0.62
TRA2B-212ENST00000480461 PMP22Q01453 160 aa11.19□□□□□ -0.62
TRA2B-212ENST00000480461 MRPL49Q13405 166 aaKnown RBP11.19□□□□□ -0.62
TRA2B-212ENST00000480461 KRT72Q14CN4 511 aa11.19□□□□□ -0.62
TRA2B-212ENST00000480461 MAPK14Q16539 360 aa11.19□□□□□ -0.62
TRA2B-212ENST00000480461 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.19□□□□□ -0.62
TRA2B-212ENST00000480461 MMEL1Q495T6 779 aa11.19□□□□□ -0.62
TRA2B-212ENST00000480461 PRR30Q53SZ7 412 aaPredicted RBP11.19□□□□□ -0.62
TRA2B-212ENST00000480461 MARCH3Q86UD3 253 aa11.19□□□□□ -0.62
TRA2B-212ENST00000480461 FBXW8Q8N3Y1 598 aa11.19□□□□□ -0.62
TRA2B-212ENST00000480461 CISD2Q8N5K1 135 aaKnown RBP11.19□□□□□ -0.62
TRA2B-212ENST00000480461 DNAJB8Q8NHS0 232 aa11.19□□□□□ -0.62
TRA2B-212ENST00000480461 ROPN1LQ96C74 230 aa11.19□□□□□ -0.62
TRA2B-212ENST00000480461 CMTM5Q96DZ9 223 aa11.19□□□□□ -0.62
TRA2B-212ENST00000480461 KLHDC3Q9BQ90 382 aa11.19□□□□□ -0.62
TRA2B-212ENST00000480461 SAP130Q9H0E3 1048 aa11.19□□□□□ -0.62
TRA2B-212ENST00000480461 KAT8Q9H7Z6 458 aaKnown RBP11.19□□□□□ -0.62
TRA2B-212ENST00000480461 EFCAB1Q9HAE3 211 aa11.19□□□□□ -0.62
TRA2B-212ENST00000480461 GALNT9Q9HCQ5 603 aa11.19□□□□□ -0.62
TRA2B-212ENST00000480461 TIMMDC1Q9NPL8 285 aa11.19□□□□□ -0.62
TRA2B-212ENST00000480461 CMTM6Q9NX76 183 aa11.19□□□□□ -0.62
TRA2B-212ENST00000480461 CNIH4Q9P003 139 aa11.19□□□□□ -0.62
TRA2B-212ENST00000480461 MKLN1Q9UL63 735 aa11.19□□□□□ -0.62
TRA2B-212ENST00000480461 ZFHX3Q15911 3703 aa11.18□□□□□ -0.62
TRA2B-212ENST00000480461 GCM2O75603 506 aaPredicted RBP11.18□□□□□ -0.62
TRA2B-212ENST00000480461 SOX30O94993 753 aa11.18□□□□□ -0.62
TRA2B-212ENST00000480461 H6PDO95479 791 aa11.18□□□□□ -0.62
TRA2B-212ENST00000480461 LDLRP01130 860 aa11.18□□□□□ -0.62
TRA2B-212ENST00000480461 RFPL3SP0C7P2 107 aa11.18□□□□□ -0.62
TRA2B-212ENST00000480461 TBXA2RP21731 343 aa11.18□□□□□ -0.62
TRA2B-212ENST00000480461 IL12BP29460 328 aa11.18□□□□□ -0.62
TRA2B-212ENST00000480461 RFC3P40938 356 aa11.18□□□□□ -0.62
TRA2B-212ENST00000480461 KHKP50053 298 aa11.18□□□□□ -0.62
TRA2B-212ENST00000480461 RNF144AP50876 292 aaPredicted RBP11.18□□□□□ -0.62
TRA2B-212ENST00000480461 DSTNP60981 165 aa11.18□□□□□ -0.62
TRA2B-212ENST00000480461 PSPHP78330 225 aa11.18□□□□□ -0.62
TRA2B-212ENST00000480461 CHRNEQ04844 493 aa11.18□□□□□ -0.62
TRA2B-212ENST00000480461 EIF2S3LQ2VIR3 472 aaKnown RBP11.18□□□□□ -0.62
TRA2B-212ENST00000480461 KLHL26Q53HC5 615 aa11.18□□□□□ -0.62
TRA2B-212ENST00000480461 TYW3Q6IPR3 259 aaKnown RBP11.18□□□□□ -0.62
TRA2B-212ENST00000480461 RPUSD3Q6P087 351 aaKnown RBP11.18□□□□□ -0.62
TRA2B-212ENST00000480461 TMEM81Q6P7N7 255 aa11.18□□□□□ -0.62
TRA2B-212ENST00000480461 FRRS1Q6ZNA5 592 aa11.18□□□□□ -0.62
TRA2B-212ENST00000480461 MTERF4Q7Z6M4 381 aaKnown RBP11.18□□□□□ -0.62
TRA2B-212ENST00000480461 HMGN2P46Q86SG4 172 aa11.18□□□□□ -0.62
TRA2B-212ENST00000480461 CALHM3Q86XJ0 350 aa11.18□□□□□ -0.62
TRA2B-212ENST00000480461 PTOV1Q86YD1 416 aa11.18□□□□□ -0.62
TRA2B-212ENST00000480461 SLC15A3Q8IY34 581 aa11.18□□□□□ -0.62
TRA2B-212ENST00000480461 DND1Q8IYX4 353 aaKnown RBP11.18□□□□□ -0.62
TRA2B-212ENST00000480461 WDSUB1Q8N9V3 476 aa11.18□□□□□ -0.62
TRA2B-212ENST00000480461 POGLUT1Q8NBL1 392 aa11.18□□□□□ -0.62
TRA2B-212ENST00000480461 PCYOX1LQ8NBM8 494 aa11.18□□□□□ -0.62
TRA2B-212ENST00000480461 OR2M7Q8NG81 312 aa11.18□□□□□ -0.62
TRA2B-212ENST00000480461 TMEM125Q96AQ2 219 aa11.18□□□□□ -0.62
TRA2B-212ENST00000480461 ZNF583Q96ND8 569 aa11.18□□□□□ -0.62
TRA2B-212ENST00000480461 FRMD6Q96NE9 622 aa11.18□□□□□ -0.62
TRA2B-212ENST00000480461 SECISBP2Q96T21 854 aaKnown RBP11.18□□□□□ -0.62
TRA2B-212ENST00000480461 THUMPD3Q9BV44 507 aaKnown RBP11.18□□□□□ -0.62
TRA2B-212ENST00000480461 ZNF350Q9GZX5 532 aa11.18□□□□□ -0.62
TRA2B-212ENST00000480461 QRSL1Q9H0R6 528 aaKnown RBP11.18□□□□□ -0.62
TRA2B-212ENST00000480461 SLC38A1Q9H2H9 487 aa11.18□□□□□ -0.62
TRA2B-212ENST00000480461 PIF1Q9H611 641 aa11.18□□□□□ -0.62
TRA2B-212ENST00000480461 SACM1LQ9NTJ5 587 aa11.18□□□□□ -0.62
TRA2B-212ENST00000480461 RYDENQ9NUL5 291 aaKnown RBP11.18□□□□□ -0.62
TRA2B-212ENST00000480461 TUBA8Q9NY65 449 aaPredicted RBP11.18□□□□□ -0.62
TRA2B-212ENST00000480461 TAGLN3Q9UI15 199 aa11.18□□□□□ -0.62
TRA2B-212ENST00000480461 PCDHGB3Q9Y5G1 929 aa11.18□□□□□ -0.62
TRA2B-212ENST00000480461 CSMD2Q7Z408 3487 aa11.17□□□□□ -0.62
TRA2B-212ENST00000480461 LRRC3CA6NJW4 275 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms