RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 ZBTB20Q9HC78 741 aaPredicted RBP16.19■□□□□ 0.18
UPF3A-206ENST00000480362 IL1RAPQ9NPH3 570 aa16.19■□□□□ 0.18
UPF3A-206ENST00000480362 FLRT3Q9NZU0 649 aa16.19■□□□□ 0.18
UPF3A-206ENST00000480362 PRAMEF25A6NGN4 478 aa16.18■□□□□ 0.18
UPF3A-206ENST00000480362 CLDN24A6NM45 220 aa16.18■□□□□ 0.18
UPF3A-206ENST00000480362 hCG_2039718K7EN88 272 aa16.18■□□□□ 0.18
UPF3A-206ENST00000480362 EPPINO95925 133 aa16.18■□□□□ 0.18
UPF3A-206ENST00000480362 FABP3P05413 133 aa16.18■□□□□ 0.18
UPF3A-206ENST00000480362 NID1P14543 1247 aa16.18■□□□□ 0.18
UPF3A-206ENST00000480362 NAGAP17050 411 aa16.18■□□□□ 0.18
UPF3A-206ENST00000480362 MAGEA2P43356 314 aa16.18■□□□□ 0.18
UPF3A-206ENST00000480362 RNF144AP50876 292 aaPredicted RBP16.18■□□□□ 0.18
UPF3A-206ENST00000480362 EEF1A1P68104 462 aaKnown RBP16.18■□□□□ 0.18
UPF3A-206ENST00000480362 VLDLRP98155 873 aa16.18■□□□□ 0.18
UPF3A-206ENST00000480362 CHAF1BQ13112 559 aa16.18■□□□□ 0.18
UPF3A-206ENST00000480362 GRAMD1BQ3KR37 738 aa16.18■□□□□ 0.18
UPF3A-206ENST00000480362 LIN52Q52LA3 116 aa16.18■□□□□ 0.18
UPF3A-206ENST00000480362 PDZK1Q5T2W1 519 aa16.18■□□□□ 0.18
UPF3A-206ENST00000480362 FCRLBQ6BAA4 426 aa16.18■□□□□ 0.18
UPF3A-206ENST00000480362 DESI1Q6ICB0 168 aa16.18■□□□□ 0.18
UPF3A-206ENST00000480362 ZNF836Q6ZNA1 936 aa16.18■□□□□ 0.18
UPF3A-206ENST00000480362 ERMP1Q7Z2K6 904 aa16.18■□□□□ 0.18
UPF3A-206ENST00000480362 RPS19BP1Q86WX3 136 aaKnown RBP16.18■□□□□ 0.18
UPF3A-206ENST00000480362 LILRA2Q8N149 483 aa16.18■□□□□ 0.18
UPF3A-206ENST00000480362 PQLC1Q8N2U9 271 aa16.18■□□□□ 0.18
UPF3A-206ENST00000480362 CLIP4Q8N3C7 705 aa16.18■□□□□ 0.18
UPF3A-206ENST00000480362 SLC15A4Q8N697 577 aa16.18■□□□□ 0.18
UPF3A-206ENST00000480362 GEMIN6Q8WXD5 167 aaKnown RBP16.18■□□□□ 0.18
UPF3A-206ENST00000480362 THOC3Q96J01 351 aaKnown RBP16.18■□□□□ 0.18
UPF3A-206ENST00000480362 C7orf34Q96L11 122 aa16.18■□□□□ 0.18
UPF3A-206ENST00000480362 FER1L6-AS2Q96M78 137 aa16.18■□□□□ 0.18
UPF3A-206ENST00000480362 UBQLN4Q9NRR5 601 aa16.18■□□□□ 0.18
UPF3A-206ENST00000480362 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.18■□□□□ 0.18
UPF3A-206ENST00000480362 RLIMQ9NVW2 624 aa16.18■□□□□ 0.18
UPF3A-206ENST00000480362 SLC13A4Q9UKG4 626 aa16.18■□□□□ 0.18
UPF3A-206ENST00000480362 CHST2Q9Y4C5 530 aa16.18■□□□□ 0.18
UPF3A-206ENST00000480362 OR6C70A6NIJ9 312 aa16.17■□□□□ 0.18
UPF3A-206ENST00000480362 SYT5O00445 386 aa16.17■□□□□ 0.18
UPF3A-206ENST00000480362 NKX2-8O15522 239 aa16.17■□□□□ 0.18
UPF3A-206ENST00000480362 HS6ST1O60243 411 aa16.17■□□□□ 0.18
UPF3A-206ENST00000480362 MAN1A2O60476 641 aa16.17■□□□□ 0.18
UPF3A-206ENST00000480362 ABCB7O75027 752 aa16.17■□□□□ 0.18
UPF3A-206ENST00000480362 UGT2B11O75310 529 aa16.17■□□□□ 0.18
UPF3A-206ENST00000480362 ITGA10O75578 1167 aa16.17■□□□□ 0.18
UPF3A-206ENST00000480362 PPM1BO75688 479 aa16.17■□□□□ 0.18
UPF3A-206ENST00000480362 WT1P19544 449 aaPredicted RBP16.17■□□□□ 0.18
UPF3A-206ENST00000480362 FASP25445 335 aa16.17■□□□□ 0.18
UPF3A-206ENST00000480362 SLC34A1Q06495 639 aa16.17■□□□□ 0.18
UPF3A-206ENST00000480362 DCAF10Q5QP82 559 aa16.17■□□□□ 0.18
UPF3A-206ENST00000480362 MRPL2Q5T653 305 aaKnown RBP16.17■□□□□ 0.18
UPF3A-206ENST00000480362 H3F3CQ6NXT2 135 aa16.17■□□□□ 0.18
UPF3A-206ENST00000480362 LYPD8Q6UX82 237 aa16.17■□□□□ 0.18
UPF3A-206ENST00000480362 PIWIL3Q7Z3Z3 882 aaKnown RBP16.17■□□□□ 0.18
UPF3A-206ENST00000480362 TSEN54Q7Z6J9 526 aaKnown RBP16.17■□□□□ 0.18
UPF3A-206ENST00000480362 AMIGO2Q86SJ2 522 aa16.17■□□□□ 0.18
UPF3A-206ENST00000480362 CARM1Q86X55 608 aa16.17■□□□□ 0.18
UPF3A-206ENST00000480362 ZNF614Q8N883 585 aa16.17■□□□□ 0.18
UPF3A-206ENST00000480362 OR4D11Q8NGI4 311 aa16.17■□□□□ 0.18
UPF3A-206ENST00000480362 VANGL1Q8TAA9 524 aaPredicted RBP16.17■□□□□ 0.18
UPF3A-206ENST00000480362 APOBEC4Q8WW27 367 aaKnown RBP16.17■□□□□ 0.18
UPF3A-206ENST00000480362 KCNE4Q8WWG9 221 aa16.17■□□□□ 0.18
UPF3A-206ENST00000480362 RASL10BQ96S79 203 aa16.17■□□□□ 0.18
UPF3A-206ENST00000480362 WFDC6Q9BQY6 131 aa16.17■□□□□ 0.18
UPF3A-206ENST00000480362 ATP13A2Q9NQ11 1180 aa16.17■□□□□ 0.18
UPF3A-206ENST00000480362 KLHL28Q9NXS3 571 aa16.17■□□□□ 0.18
UPF3A-206ENST00000480362 YARS2Q9Y2Z4 477 aaKnown RBP16.17■□□□□ 0.18
UPF3A-206ENST00000480362 DTNAQ9Y4J8 743 aa16.17■□□□□ 0.18
UPF3A-206ENST00000480362 AHCTF1Q8WYP5 2266 aa16.16■□□□□ 0.18
UPF3A-206ENST00000480362 TLX3O43711 291 aaPredicted RBP16.16■□□□□ 0.18
UPF3A-206ENST00000480362 ICOSLGO75144 302 aa16.16■□□□□ 0.18
UPF3A-206ENST00000480362 OXSR1O95747 527 aaPredicted RBP16.16■□□□□ 0.18
UPF3A-206ENST00000480362 FCGR1AP12314 374 aa16.16■□□□□ 0.18
UPF3A-206ENST00000480362 HPGDP15428 266 aa16.16■□□□□ 0.18
UPF3A-206ENST00000480362 TBXA2RP21731 343 aa16.16■□□□□ 0.18
UPF3A-206ENST00000480362 SESN3P58005 492 aa16.16■□□□□ 0.18
UPF3A-206ENST00000480362 MLF1P58340 268 aa16.16■□□□□ 0.18
UPF3A-206ENST00000480362 KCNC4Q03721 635 aa16.16■□□□□ 0.18
UPF3A-206ENST00000480362 EFR3AQ14156 821 aa16.16■□□□□ 0.18
UPF3A-206ENST00000480362 IQCCQ4KMZ1 466 aa16.16■□□□□ 0.18
UPF3A-206ENST00000480362 KLHL26Q53HC5 615 aa16.16■□□□□ 0.18
UPF3A-206ENST00000480362 EIPR1Q53HC9 387 aa16.16■□□□□ 0.18
UPF3A-206ENST00000480362 RNF220Q5VTB9 566 aa16.16■□□□□ 0.18
UPF3A-206ENST00000480362 HMBOX1Q6NT76 420 aa16.16■□□□□ 0.18
UPF3A-206ENST00000480362 LACC1Q8IV20 430 aa16.16■□□□□ 0.18
UPF3A-206ENST00000480362 ARMC10Q8N2F6 343 aa16.16■□□□□ 0.18
UPF3A-206ENST00000480362 SLC5A8Q8N695 610 aa16.16■□□□□ 0.18
UPF3A-206ENST00000480362 TMEM102Q8N9M5 508 aaPredicted RBP16.16■□□□□ 0.18
UPF3A-206ENST00000480362 ZNF527Q8NB42 609 aa16.16■□□□□ 0.18
UPF3A-206ENST00000480362 ZNF248Q8NDW4 579 aa16.16■□□□□ 0.18
UPF3A-206ENST00000480362 BRIX1Q8TDN6 353 aaKnown RBP16.16■□□□□ 0.18
UPF3A-206ENST00000480362 THAP4Q8WY91 577 aa16.16■□□□□ 0.18
UPF3A-206ENST00000480362 ARHGDIGQ99819 225 aa16.16■□□□□ 0.18
UPF3A-206ENST00000480362 AMBRA1Q9C0C7 1298 aa16.16■□□□□ 0.18
UPF3A-206ENST00000480362 SEMA6AQ9H2E6 1030 aa16.16■□□□□ 0.18
UPF3A-206ENST00000480362 ARMC7Q9H6L4 198 aa16.16■□□□□ 0.18
UPF3A-206ENST00000480362 AGPAT4Q9NRZ5 378 aa16.16■□□□□ 0.18
UPF3A-206ENST00000480362 C6orf203Q9P0P8 240 aaPredicted RBP16.16■□□□□ 0.18
UPF3A-206ENST00000480362 RIMS3Q9UJD0 308 aa16.16■□□□□ 0.18
UPF3A-206ENST00000480362 ABCG2Q9UNQ0 655 aa16.16■□□□□ 0.18
UPF3A-206ENST00000480362 SLC9A8Q9Y2E8 581 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms